RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 NAP1L5Q96NT1 182 aaPredicted RBP6.45□□□□□ -1.38
GMDS-207ENST00000530459 MAP7D2Q96T17 732 aa6.45□□□□□ -1.38
GMDS-207ENST00000530459 ATP1B4Q9UN42 357 aaPredicted RBP6.45□□□□□ -1.38
GMDS-207ENST00000530459 NESP48681 1621 aa6.45□□□□□ -1.38
GMDS-207ENST00000530459 MAPK8IP3Q9UPT6 1336 aa6.45□□□□□ -1.38
GMDS-207ENST00000530459 KDM5DQ9BY66 1539 aa6.45□□□□□ -1.38
GMDS-207ENST00000530459 NINLQ9Y2I6 1382 aa6.44□□□□□ -1.38
GMDS-207ENST00000530459 PER1O15534 1290 aaPredicted RBP6.44□□□□□ -1.38
GMDS-207ENST00000530459 NKX1-1Q15270 411 aaPredicted RBP6.44□□□□□ -1.38
GMDS-207ENST00000530459 TMEM132AQ24JP5 1023 aa6.44□□□□□ -1.38
GMDS-207ENST00000530459 PODXL2Q9NZ53 605 aa6.44□□□□□ -1.38
GMDS-207ENST00000530459 EPRSP07814 1512 aaKnown RBP6.44□□□□□ -1.38
GMDS-207ENST00000530459 ZNF521Q96K83 1311 aa6.44□□□□□ -1.38
GMDS-207ENST00000530459 CEP170Q5SW79 1584 aa6.44□□□□□ -1.38
GMDS-207ENST00000530459 CAMSAP2Q08AD1 1489 aa6.43□□□□□ -1.38
GMDS-207ENST00000530459 ESPNB1AK53 854 aa6.43□□□□□ -1.38
GMDS-207ENST00000530459 RIOK3O14730 519 aaKnown RBP6.43□□□□□ -1.38
GMDS-207ENST00000530459 NGEFQ8N5V2 710 aa6.43□□□□□ -1.38
GMDS-207ENST00000530459 CDCA7LQ96GN5 454 aa6.43□□□□□ -1.38
GMDS-207ENST00000530459 GTPBP6O43824 516 aaPredicted RBP6.42□□□□□ -1.38
GMDS-207ENST00000530459 MCM4P33991 863 aa6.42□□□□□ -1.38
GMDS-207ENST00000530459 DUSP27Q5VZP5 1158 aa6.42□□□□□ -1.38
GMDS-207ENST00000530459 TRMT2AQ8IZ69 625 aaKnown RBP6.42□□□□□ -1.38
GMDS-207ENST00000530459 GPRASP1Q5JY77 1395 aa6.42□□□□□ -1.38
GMDS-207ENST00000530459 ANKRD30AQ9BXX3 1397 aa6.42□□□□□ -1.38
GMDS-207ENST00000530459 POLA1P09884 1462 aaPredicted RBP6.41□□□□□ -1.38
GMDS-207ENST00000530459 WDR62O43379 1518 aa6.41□□□□□ -1.38
GMDS-207ENST00000530459 STK25O00506 426 aa6.41□□□□□ -1.38
GMDS-207ENST00000530459 PLIN1O60240 522 aa6.41□□□□□ -1.38
GMDS-207ENST00000530459 PTMSP20962 102 aa6.41□□□□□ -1.38
GMDS-207ENST00000530459 C14orf37Q86TY3 774 aa6.41□□□□□ -1.38
GMDS-207ENST00000530459 CHIC2Q9UKJ5 165 aa6.41□□□□□ -1.38
GMDS-207ENST00000530459 PRDM4Q9UKN5 801 aa6.41□□□□□ -1.38
GMDS-207ENST00000530459 CROCC2H7BZ55 1655 aa6.41□□□□□ -1.38
GMDS-207ENST00000530459 COL17A1Q9UMD9 1497 aaPredicted RBP6.41□□□□□ -1.38
GMDS-207ENST00000530459 TOPBP1Q92547 1522 aa6.4□□□□□ -1.38
GMDS-207ENST00000530459 ABCC2Q92887 1545 aa6.4□□□□□ -1.38
GMDS-207ENST00000530459 PLXNC1O60486 1568 aa6.4□□□□□ -1.38
GMDS-207ENST00000530459 TRPM1Q7Z4N2 1603 aa6.4□□□□□ -1.38
GMDS-207ENST00000530459 DDX11L8A8MPP1 907 aa6.4□□□□□ -1.38
GMDS-207ENST00000530459 PDE3AQ14432 1141 aa6.4□□□□□ -1.38
GMDS-207ENST00000530459 MTERF4Q7Z6M4 381 aaKnown RBP6.4□□□□□ -1.38
GMDS-207ENST00000530459 TBC1D32Q96NH3 1257 aa6.4□□□□□ -1.38
GMDS-207ENST00000530459 MYH16Q9H6N6 1097 aa6.4□□□□□ -1.38
GMDS-207ENST00000530459 CHMP5Q9NZZ3 219 aa6.4□□□□□ -1.38
GMDS-207ENST00000530459 CGNL1Q0VF96 1302 aa6.4□□□□□ -1.39
GMDS-207ENST00000530459 C20orf194Q5TEA3 1177 aa6.39□□□□□ -1.39
GMDS-207ENST00000530459 SKAP1Q86WV1 359 aa6.39□□□□□ -1.39
GMDS-207ENST00000530459 SMAP1Q8IYB5 467 aaPredicted RBP6.39□□□□□ -1.39
GMDS-207ENST00000530459 PPP1R9BQ96SB3 815 aa6.39□□□□□ -1.39
GMDS-207ENST00000530459 CARD11Q9BXL7 1154 aa6.39□□□□□ -1.39
GMDS-207ENST00000530459 GRPEL1Q9HAV7 217 aa6.39□□□□□ -1.39
GMDS-207ENST00000530459 PTPRGP23470 1445 aa6.39□□□□□ -1.39
GMDS-207ENST00000530459 NCOA3Q9Y6Q9 1424 aa6.39□□□□□ -1.39
GMDS-207ENST00000530459 EIF4G3O43432 1585 aaKnown RBP6.39□□□□□ -1.39
GMDS-207ENST00000530459 ITSN2Q9NZM3 1697 aa6.39□□□□□ -1.39
GMDS-207ENST00000530459 TRAK2O60296 914 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 OFD1O75665 1012 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 GOLGA2Q08379 1002 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 SLFN5Q08AF3 891 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 SKOR2Q2VWA4 1001 aaPredicted RBP6.38□□□□□ -1.39
GMDS-207ENST00000530459 HS1BP3Q53T59 392 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 DCAF8Q5TAQ9 597 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 TBC1D2Q9BYX2 928 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 UPF2Q9HAU5 1272 aaKnown RBP6.38□□□□□ -1.39
GMDS-207ENST00000530459 IBTKQ9P2D0 1353 aaPredicted RBP6.38□□□□□ -1.39
GMDS-207ENST00000530459 NPC1L1Q9UHC9 1359 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 ARHGAP31Q2M1Z3 1444 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 NKTRP30414 1462 aaKnown RBP6.38□□□□□ -1.39
GMDS-207ENST00000530459 FANCD2Q9BXW9 1451 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 RAD54L2Q9Y4B4 1467 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 PRDM15P57071 1507 aaPredicted RBP6.38□□□□□ -1.39
GMDS-207ENST00000530459 KIAA0586Q9BVV6 1533 aa6.38□□□□□ -1.39
GMDS-207ENST00000530459 LAMC3Q9Y6N6 1575 aa6.37□□□□□ -1.39
GMDS-207ENST00000530459 ABCC10Q5T3U5 1492 aa6.37□□□□□ -1.39
GMDS-207ENST00000530459 SHANK2Q9UPX8 1470 aa6.37□□□□□ -1.39
GMDS-207ENST00000530459 PIK3C2GO75747 1445 aa6.37□□□□□ -1.39
GMDS-207ENST00000530459 PLEKHH1Q9ULM0 1364 aa6.37□□□□□ -1.39
GMDS-207ENST00000530459 ST20-MTHFSA0A0A6YYL1 179 aa6.37□□□□□ -1.39
GMDS-207ENST00000530459 VGFO15240 615 aaPredicted RBP6.37□□□□□ -1.39
GMDS-207ENST00000530459 CCDC173Q0VFZ6 552 aa6.37□□□□□ -1.39
GMDS-207ENST00000530459 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.37□□□□□ -1.39
GMDS-207ENST00000530459 HOMEZQ8IX15 550 aa6.37□□□□□ -1.39
GMDS-207ENST00000530459 PANK2Q9BZ23 570 aa6.37□□□□□ -1.39
GMDS-207ENST00000530459 RYDENQ9NUL5 291 aaKnown RBP6.37□□□□□ -1.39
GMDS-207ENST00000530459 ADCY10Q96PN6 1610 aa6.36□□□□□ -1.39
GMDS-207ENST00000530459 RTEL1-TNFRSF6BF6WH68 1400 aa6.36□□□□□ -1.39
GMDS-207ENST00000530459 NUP160Q12769 1436 aa6.36□□□□□ -1.39
GMDS-207ENST00000530459 PRAG1Q86YV5 1406 aa6.36□□□□□ -1.39
GMDS-207ENST00000530459 ERBB4Q15303 1308 aa6.36□□□□□ -1.39
GMDS-207ENST00000530459 DSG3P32926 999 aa6.36□□□□□ -1.39
GMDS-207ENST00000530459 DDIT3P35638 169 aa6.36□□□□□ -1.39
GMDS-207ENST00000530459 RGS3P49796 1198 aa6.36□□□□□ -1.39
GMDS-207ENST00000530459 UTP14CQ5TAP6 766 aaKnown RBP6.36□□□□□ -1.39
GMDS-207ENST00000530459 EIF2AK4Q9P2K8 1649 aaKnown RBP6.36□□□□□ -1.39
GMDS-207ENST00000530459 CLEC17AQ6ZS10 378 aa6.35□□□□□ -1.39
GMDS-207ENST00000530459 ZSCAN30Q86W11 494 aa6.35□□□□□ -1.39
GMDS-207ENST00000530459 PMFBP1Q8TBY8 1022 aa6.35□□□□□ -1.39
GMDS-207ENST00000530459 TRIM44Q96DX7 344 aaPredicted RBP6.35□□□□□ -1.39
GMDS-207ENST00000530459 IQGAP2Q13576 1575 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms