RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 TEFQ10587 303 aa15.85■□□□□ 0.13
MACF1-230ENST00000530275 RRP1P56182 461 aaKnown RBP15.85■□□□□ 0.13
MACF1-230ENST00000530275 PDE4AP27815 886 aa15.85■□□□□ 0.13
MACF1-230ENST00000530275 C9orf78Q9NZ63 289 aaPredicted RBP15.84■□□□□ 0.13
MACF1-230ENST00000530275 ZKSCAN1P17029 563 aaPredicted RBP15.84■□□□□ 0.13
MACF1-230ENST00000530275 CRBNQ96SW2 442 aa15.84■□□□□ 0.13
MACF1-230ENST00000530275 ANKRD20A12PQ8NF67 263 aa15.84■□□□□ 0.13
MACF1-230ENST00000530275 IFIT2P09913 472 aaKnown RBP15.83■□□□□ 0.13
MACF1-230ENST00000530275 ROCK1Q13464 1354 aa15.83■□□□□ 0.13
MACF1-230ENST00000530275 MSH5O43196 834 aa15.83■□□□□ 0.13
MACF1-230ENST00000530275 REC8O95072 547 aa15.83■□□□□ 0.13
MACF1-230ENST00000530275 HSP90AA2PQ14568 343 aaPredicted RBP15.83■□□□□ 0.13
MACF1-230ENST00000530275 NGEFQ8N5V2 710 aa15.83■□□□□ 0.12
MACF1-230ENST00000530275 HOOK1Q9UJC3 728 aaKnown RBP15.83■□□□□ 0.12
MACF1-230ENST00000530275 PLIN1O60240 522 aa15.83■□□□□ 0.12
MACF1-230ENST00000530275 ST20-MTHFSA0A0A6YYL1 179 aa15.83■□□□□ 0.12
MACF1-230ENST00000530275 EIF2S2P20042 333 aaKnown RBP15.83■□□□□ 0.12
MACF1-230ENST00000530275 RSPH6AQ9H0K4 717 aa15.83■□□□□ 0.12
MACF1-230ENST00000530275 ZNF592Q92610 1267 aa15.82■□□□□ 0.12
MACF1-230ENST00000530275 IPO7O95373 1038 aaKnown RBP15.81■□□□□ 0.12
MACF1-230ENST00000530275 WWC1Q8IX03 1113 aa15.81■□□□□ 0.12
MACF1-230ENST00000530275 DDX19BQ9UMR2 479 aa15.81■□□□□ 0.12
MACF1-230ENST00000530275 APPP05067 770 aa15.81■□□□□ 0.12
MACF1-230ENST00000530275 CPLX1O14810 134 aa15.81■□□□□ 0.12
MACF1-230ENST00000530275 VGFO15240 615 aaPredicted RBP15.81■□□□□ 0.12
MACF1-230ENST00000530275 EXOC6Q8TAG9 804 aa15.81■□□□□ 0.12
MACF1-230ENST00000530275 SLC4A3P48751 1232 aa15.81■□□□□ 0.12
MACF1-230ENST00000530275 GSE1Q14687 1217 aa15.8■□□□□ 0.12
MACF1-230ENST00000530275 COG6Q9Y2V7 657 aa15.8■□□□□ 0.12
MACF1-230ENST00000530275 DHX16O60231 1041 aaKnown RBP15.8■□□□□ 0.12
MACF1-230ENST00000530275 VPS37DQ86XT2 251 aa15.79■□□□□ 0.12
MACF1-230ENST00000530275 RNF20Q5VTR2 975 aa15.79■□□□□ 0.12
MACF1-230ENST00000530275 DDX58O95786 925 aaKnown RBP15.79■□□□□ 0.12
MACF1-230ENST00000530275 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
MACF1-230ENST00000530275 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
MACF1-230ENST00000530275 ERICH2A1L162 156 aa15.78■□□□□ 0.12
MACF1-230ENST00000530275 PATL2C9JE40 543 aaKnown RBP15.78■□□□□ 0.12
MACF1-230ENST00000530275 TRDNQ13061 729 aa15.78■□□□□ 0.12
MACF1-230ENST00000530275 BICD2Q8TD16 824 aa15.78■□□□□ 0.12
MACF1-230ENST00000530275 API5Q9BZZ5 524 aaKnown RBP15.78■□□□□ 0.12
MACF1-230ENST00000530275 DIAPH1O60610 1272 aaKnown RBP15.78■□□□□ 0.12
MACF1-230ENST00000530275 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.12
MACF1-230ENST00000530275 MINK1Q8N4C8 1332 aaPredicted RBP15.77■□□□□ 0.12
MACF1-230ENST00000530275 ZBED9Q6R2W3 1325 aa15.77■□□□□ 0.11
MACF1-230ENST00000530275 USP47Q96K76 1375 aa15.77■□□□□ 0.11
MACF1-230ENST00000530275 G3BP1Q13283 466 aaKnown RBP eCLIP15.77■□□□□ 0.112e-7■□□□□ 9.5
MACF1-230ENST00000530275 ZNF771Q7L3S4 317 aaPredicted RBP15.76■□□□□ 0.11
MACF1-230ENST00000530275 NECTIN2Q92692 538 aa15.76■□□□□ 0.11
MACF1-230ENST00000530275 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
MACF1-230ENST00000530275 HOMER1Q86YM7 354 aa15.75■□□□□ 0.11
MACF1-230ENST00000530275 RIPK4P57078 832 aa15.74■□□□□ 0.11
MACF1-230ENST00000530275 CCDC43Q96MW1 224 aaKnown RBP15.74■□□□□ 0.11
MACF1-230ENST00000530275 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
MACF1-230ENST00000530275 INTS3Q68E01 1043 aaKnown RBP15.74■□□□□ 0.11
MACF1-230ENST00000530275 TEX35Q5T0J7 233 aa15.74■□□□□ 0.11
MACF1-230ENST00000530275 SASS6Q6UVJ0 657 aa15.73■□□□□ 0.11
MACF1-230ENST00000530275 MEX3CQ5U5Q3 659 aaKnown RBP15.73■□□□□ 0.11
MACF1-230ENST00000530275 SMC3Q9UQE7 1217 aa15.73■□□□□ 0.11
MACF1-230ENST00000530275 APAF1O14727 1248 aa15.72■□□□□ 0.11
MACF1-230ENST00000530275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.72■□□□□ 0.11
MACF1-230ENST00000530275 FKBP5Q13451 457 aaPredicted RBP15.72■□□□□ 0.11
MACF1-230ENST00000530275 SYTL4Q96C24 671 aaPredicted RBP15.72■□□□□ 0.11
MACF1-230ENST00000530275 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
MACF1-230ENST00000530275 CWC22Q9HCG8 908 aaKnown RBP15.72■□□□□ 0.11
MACF1-230ENST00000530275 ERC2O15083 957 aa15.72■□□□□ 0.11
MACF1-230ENST00000530275 HSP90AB4PQ58FF6 505 aa15.71■□□□□ 0.11
MACF1-230ENST00000530275 CHMP5Q9NZZ3 219 aa15.71■□□□□ 0.11
MACF1-230ENST00000530275 VPS37CA5D8V6 355 aaPredicted RBP15.71■□□□□ 0.11
MACF1-230ENST00000530275 PSME1Q06323 249 aa15.71■□□□□ 0.1
MACF1-230ENST00000530275 SAFBQ15424 915 aaKnown RBP eCLIP15.71■□□□□ 0.1
MACF1-230ENST00000530275 KRI1Q8N9T8 703 aaKnown RBP15.71■□□□□ 0.1
MACF1-230ENST00000530275 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
MACF1-230ENST00000530275 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
MACF1-230ENST00000530275 FOSBP53539 338 aa15.7■□□□□ 0.1
MACF1-230ENST00000530275 AK7Q96M32 723 aa15.7■□□□□ 0.1
MACF1-230ENST00000530275 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
MACF1-230ENST00000530275 RUFY1Q96T51 708 aa15.7■□□□□ 0.1
MACF1-230ENST00000530275 DHX57Q6P158 1386 aaKnown RBP15.69■□□□□ 0.1
MACF1-230ENST00000530275 NAP1L1P55209 391 aaKnown RBP15.69■□□□□ 0.1
MACF1-230ENST00000530275 JPH4Q96JJ6 628 aa15.69■□□□□ 0.1
MACF1-230ENST00000530275 TSPYL4Q9UJ04 414 aa15.69■□□□□ 0.1
MACF1-230ENST00000530275 CCDC73Q6ZRK6 1079 aa15.69■□□□□ 0.1
MACF1-230ENST00000530275 RBM33Q96EV2 1170 aaKnown RBP15.69■□□□□ 0.1
MACF1-230ENST00000530275 CDR1P51861 262 aa15.68■□□□□ 0.1
MACF1-230ENST00000530275 NUCB2P80303 420 aa15.68■□□□□ 0.1
MACF1-230ENST00000530275 NINLQ9Y2I6 1382 aa15.68■□□□□ 0.1
MACF1-230ENST00000530275 BRMS1Q9HCU9 246 aa15.68■□□□□ 0.1
MACF1-230ENST00000530275 GNAI1P63096 354 aa15.67■□□□□ 0.1
MACF1-230ENST00000530275 CT47A1Q5JQC4 288 aaPredicted RBP15.67■□□□□ 0.1
MACF1-230ENST00000530275 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.67■□□□□ 0.1
MACF1-230ENST00000530275 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.67■□□□□ 0.1
MACF1-230ENST00000530275 ACBD3Q9H3P7 528 aa15.66■□□□□ 0.1
MACF1-230ENST00000530275 OLFM4Q6UX06 510 aa15.66■□□□□ 0.1
MACF1-230ENST00000530275 RALYLQ86SE5 291 aaKnown RBP15.66■□□□□ 0.1
MACF1-230ENST00000530275 ARGLU1Q9NWB6 273 aaPredicted RBP15.66■□□□□ 0.1
MACF1-230ENST00000530275 RRP12Q5JTH9 1297 aaKnown RBP15.65■□□□□ 0.1
MACF1-230ENST00000530275 RIC3Q7Z5B4 369 aa15.65■□□□□ 0.1
MACF1-230ENST00000530275 MNS1Q8NEH6 495 aa15.65■□□□□ 0.1
MACF1-230ENST00000530275 EPS15P42566 896 aa15.64■□□□□ 0.09
MACF1-230ENST00000530275 ODF2Q5BJF6 829 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms