RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-215ENST00000529764 TRIM52Q96A61 297 aa9.89□□□□□ -0.83
LTBP3-215ENST00000529764 ARHGAP23Q9P227 1491 aa9.89□□□□□ -0.83
LTBP3-215ENST00000529764 SYNMO15061 1565 aa9.88□□□□□ -0.83
LTBP3-215ENST00000529764 E9PCH4 1651 aa9.87□□□□□ -0.83
LTBP3-215ENST00000529764 LTKP29376 864 aa9.86□□□□□ -0.83
LTBP3-215ENST00000529764 ZNF326Q5BKZ1 582 aaKnown RBP9.85□□□□□ -0.83
LTBP3-215ENST00000529764 HFM1A2PYH4 1435 aa9.84□□□□□ -0.83
LTBP3-215ENST00000529764 NAIPQ13075 1403 aa9.84□□□□□ -0.83
LTBP3-215ENST00000529764 SPHKAPQ2M3C7 1700 aa9.84□□□□□ -0.83
LTBP3-215ENST00000529764 RIMS2Q9UQ26 1411 aa9.83□□□□□ -0.84
LTBP3-215ENST00000529764 PIP4K2BP78356 416 aa9.83□□□□□ -0.84
LTBP3-215ENST00000529764 SLC4A1APQ9BWU0 796 aaKnown RBP9.83□□□□□ -0.84
LTBP3-215ENST00000529764 TMEM131LA2VDJ0 1609 aa9.82□□□□□ -0.84
LTBP3-215ENST00000529764 KCNA6P17658 529 aa9.82□□□□□ -0.84
LTBP3-215ENST00000529764 PROSER2Q86WR7 435 aaPredicted RBP9.82□□□□□ -0.84
LTBP3-215ENST00000529764 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
LTBP3-215ENST00000529764 PLEKHG1Q9ULL1 1385 aa9.82□□□□□ -0.84
LTBP3-215ENST00000529764 MYO5BQ9ULV0 1848 aa9.82□□□□□ -0.84
LTBP3-215ENST00000529764 KIF1BO60333 1816 aa9.81□□□□□ -0.84
LTBP3-215ENST00000529764 C14orf37Q86TY3 774 aa9.8□□□□□ -0.84
LTBP3-215ENST00000529764 TBX22Q9Y458 520 aa9.8□□□□□ -0.84
LTBP3-215ENST00000529764 LRRC7Q96NW7 1537 aa9.8□□□□□ -0.84
LTBP3-215ENST00000529764 DIP2AQ14689 1571 aa9.8□□□□□ -0.84
LTBP3-215ENST00000529764 NKTRP30414 1462 aaKnown RBP9.79□□□□□ -0.84
LTBP3-215ENST00000529764 ZFYVE9O95405 1425 aa9.79□□□□□ -0.84
LTBP3-215ENST00000529764 MSH6P52701 1360 aa9.78□□□□□ -0.84
LTBP3-215ENST00000529764 PIK3R4Q99570 1358 aa9.78□□□□□ -0.84
LTBP3-215ENST00000529764 TRPM2O94759 1503 aa9.78□□□□□ -0.84
LTBP3-215ENST00000529764 VGFO15240 615 aaPredicted RBP9.78□□□□□ -0.84
LTBP3-215ENST00000529764 NUTM2DQ5VT03 806 aaPredicted RBP9.77□□□□□ -0.85
LTBP3-215ENST00000529764 STRCP1A6NGW2 1772 aa9.77□□□□□ -0.85
LTBP3-215ENST00000529764 TMEM94Q12767 1356 aa9.76□□□□□ -0.85
LTBP3-215ENST00000529764 DISP3Q9P2K9 1392 aa9.76□□□□□ -0.85
LTBP3-215ENST00000529764 RPGRIP1LQ68CZ1 1315 aa9.76□□□□□ -0.85
LTBP3-215ENST00000529764 CHD2O14647 1828 aaKnown RBP9.75□□□□□ -0.85
LTBP3-215ENST00000529764 CCDC144AA2RUR9 1427 aa9.75□□□□□ -0.85
LTBP3-215ENST00000529764 SETD5Q9C0A6 1442 aa9.75□□□□□ -0.85
LTBP3-215ENST00000529764 NCOA3Q9Y6Q9 1424 aa9.75□□□□□ -0.85
LTBP3-215ENST00000529764 NWD1Q149M9 1564 aa9.75□□□□□ -0.85
LTBP3-215ENST00000529764 ATF3P18847 181 aa9.74□□□□□ -0.85
LTBP3-215ENST00000529764 HSPA1LP34931 641 aa9.74□□□□□ -0.85
LTBP3-215ENST00000529764 MPHOSPH9Q99550 1183 aa9.74□□□□□ -0.85
LTBP3-215ENST00000529764 CLTCL1P53675 1640 aa9.74□□□□□ -0.85
LTBP3-215ENST00000529764 CADPS2Q86UW7 1296 aa9.73□□□□□ -0.85
LTBP3-215ENST00000529764 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
LTBP3-215ENST00000529764 SETBP1Q9Y6X0 1596 aa9.71□□□□□ -0.85
LTBP3-215ENST00000529764 XIRP1Q702N8 1843 aaKnown RBP9.71□□□□□ -0.85
LTBP3-215ENST00000529764 C19orf44Q9H6X5 657 aa9.71□□□□□ -0.86
LTBP3-215ENST00000529764 FAM135BQ49AJ0 1406 aa9.71□□□□□ -0.86
LTBP3-215ENST00000529764 ADAMTS13Q76LX8 1427 aa9.71□□□□□ -0.86
LTBP3-215ENST00000529764 SLAIN2Q9P270 581 aa9.7□□□□□ -0.86
LTBP3-215ENST00000529764 NEXMIFQ5QGS0 1516 aa9.7□□□□□ -0.86
LTBP3-215ENST00000529764 RGL3Q3MIN7 710 aa9.69□□□□□ -0.86
LTBP3-215ENST00000529764 ANKRD30BQ9BXX2 1392 aa9.69□□□□□ -0.86
LTBP3-215ENST00000529764 RAB3GAP2Q9H2M9 1393 aa9.68□□□□□ -0.86
LTBP3-215ENST00000529764 HRCP23327 699 aa9.68□□□□□ -0.86
LTBP3-215ENST00000529764 CACNB1Q02641 598 aaPredicted RBP9.68□□□□□ -0.86
LTBP3-215ENST00000529764 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
LTBP3-215ENST00000529764 PPLO60437 1756 aa9.67□□□□□ -0.86
LTBP3-215ENST00000529764 ROBO1Q9Y6N7 1651 aa9.67□□□□□ -0.86
LTBP3-215ENST00000529764 DCCP43146 1447 aa9.66□□□□□ -0.86
LTBP3-215ENST00000529764 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.65□□□□□ -0.86
LTBP3-215ENST00000529764 ALKQ9UM73 1620 aa9.65□□□□□ -0.86
LTBP3-215ENST00000529764 NRXN3Q9Y4C0 1643 aa9.65□□□□□ -0.86
LTBP3-215ENST00000529764 XRN1Q8IZH2 1706 aaKnown RBP9.65□□□□□ -0.87
LTBP3-215ENST00000529764 METP08581 1390 aa9.64□□□□□ -0.87
LTBP3-215ENST00000529764 MED1Q15648 1581 aaPredicted RBP9.64□□□□□ -0.87
LTBP3-215ENST00000529764 STAC3Q96MF2 364 aa9.64□□□□□ -0.87
LTBP3-215ENST00000529764 PHLPP1O60346 1717 aa9.64□□□□□ -0.87
LTBP3-215ENST00000529764 PTCH1Q13635 1447 aa9.63□□□□□ -0.87
LTBP3-215ENST00000529764 PTPRUQ92729 1446 aa9.63□□□□□ -0.87
LTBP3-215ENST00000529764 JCADQ9P266 1359 aa9.63□□□□□ -0.87
LTBP3-215ENST00000529764 ADGRL3Q9HAR2 1447 aa9.62□□□□□ -0.87
LTBP3-215ENST00000529764 LAMC1P11047 1609 aa9.61□□□□□ -0.87
LTBP3-215ENST00000529764 MEX3CQ5U5Q3 659 aaKnown RBP9.61□□□□□ -0.87
LTBP3-215ENST00000529764 PPP4R3CPQ6ZMV5 832 aa9.61□□□□□ -0.87
LTBP3-215ENST00000529764 SPATA31E1Q6ZUB1 1445 aa9.61□□□□□ -0.87
LTBP3-215ENST00000529764 DHX57Q6P158 1386 aaKnown RBP9.61□□□□□ -0.87
LTBP3-215ENST00000529764 ADGRF5Q8IZF2 1346 aa9.6□□□□□ -0.87
LTBP3-215ENST00000529764 IFT172Q9UG01 1749 aa9.6□□□□□ -0.87
LTBP3-215ENST00000529764 HOXD11P31277 338 aaPredicted RBP9.6□□□□□ -0.87
LTBP3-215ENST00000529764 STK26Q9P289 416 aa9.6□□□□□ -0.87
LTBP3-215ENST00000529764 SPATA31A6Q5VVP1 1343 aa9.59□□□□□ -0.87
LTBP3-215ENST00000529764 LRRC59Q96AG4 307 aaKnown RBP9.59□□□□□ -0.87
LTBP3-215ENST00000529764 MYOM2P54296 1465 aa9.59□□□□□ -0.87
LTBP3-215ENST00000529764 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
LTBP3-215ENST00000529764 PRAG1Q86YV5 1406 aa9.58□□□□□ -0.88
LTBP3-215ENST00000529764 AHDC1Q5TGY3 1603 aaPredicted RBP9.58□□□□□ -0.88
LTBP3-215ENST00000529764 SOCS7O14512 581 aa9.58□□□□□ -0.88
LTBP3-215ENST00000529764 BRINP3Q76B58 766 aa9.58□□□□□ -0.88
LTBP3-215ENST00000529764 SETD1AO15047 1707 aaKnown RBP9.58□□□□□ -0.88
LTBP3-215ENST00000529764 NALCNQ8IZF0 1738 aa9.58□□□□□ -0.88
LTBP3-215ENST00000529764 LRPPRCP42704 1394 aaKnown RBP9.58□□□□□ -0.88
LTBP3-215ENST00000529764 DCAF8L1A6NGE4 600 aa9.57□□□□□ -0.88
LTBP3-215ENST00000529764 DCAF11Q8TEB1 546 aa9.57□□□□□ -0.88
LTBP3-215ENST00000529764 C14orf93Q9H972 538 aaKnown RBP9.57□□□□□ -0.88
LTBP3-215ENST00000529764 POGKQ9P215 609 aa9.57□□□□□ -0.88
LTBP3-215ENST00000529764 ABCC11Q96J66 1382 aa9.57□□□□□ -0.88
LTBP3-215ENST00000529764 ROBO2Q9HCK4 1378 aa9.57□□□□□ -0.88
LTBP3-215ENST00000529764 MST1RQ04912 1400 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms