RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 ZFYVE9O95405 1425 aa16.66■□□□□ 0.26
LDLRAD3-204ENST00000529759 CHD2O14647 1828 aaKnown RBP16.66■□□□□ 0.26
LDLRAD3-204ENST00000529759 ANKRD30AQ9BXX3 1397 aa16.65■□□□□ 0.26
LDLRAD3-204ENST00000529759 NUTM2DQ5VT03 806 aaPredicted RBP16.65■□□□□ 0.26
LDLRAD3-204ENST00000529759 BCANQ96GW7 911 aa16.65■□□□□ 0.26
LDLRAD3-204ENST00000529759 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
LDLRAD3-204ENST00000529759 ADGRL2O95490 1459 aa16.64■□□□□ 0.25
LDLRAD3-204ENST00000529759 NKTRP30414 1462 aaKnown RBP16.62■□□□□ 0.25
LDLRAD3-204ENST00000529759 LRP6O75581 1613 aa16.62■□□□□ 0.25
LDLRAD3-204ENST00000529759 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
LDLRAD3-204ENST00000529759 TMEM131LA2VDJ0 1609 aa16.61■□□□□ 0.25
LDLRAD3-204ENST00000529759 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
LDLRAD3-204ENST00000529759 MSH6P52701 1360 aa16.61■□□□□ 0.25
LDLRAD3-204ENST00000529759 RIMS2Q9UQ26 1411 aa16.61■□□□□ 0.25
LDLRAD3-204ENST00000529759 COL16A1Q07092 1604 aaPredicted RBP16.6■□□□□ 0.25
LDLRAD3-204ENST00000529759 PLEKHG1Q9ULL1 1385 aa16.6■□□□□ 0.25
LDLRAD3-204ENST00000529759 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.24
LDLRAD3-204ENST00000529759 JCADQ9P266 1359 aa16.58■□□□□ 0.24
LDLRAD3-204ENST00000529759 ADAMTS13Q76LX8 1427 aa16.58■□□□□ 0.24
LDLRAD3-204ENST00000529759 ANKRD50Q9ULJ7 1429 aa16.57■□□□□ 0.24
LDLRAD3-204ENST00000529759 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
LDLRAD3-204ENST00000529759 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
LDLRAD3-204ENST00000529759 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
LDLRAD3-204ENST00000529759 UNC13BO14795 1591 aa16.55■□□□□ 0.24
LDLRAD3-204ENST00000529759 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
LDLRAD3-204ENST00000529759 E9PCH4 1651 aa16.54■□□□□ 0.24
LDLRAD3-204ENST00000529759 PPP1R15AO75807 674 aaPredicted RBP16.54■□□□□ 0.24
LDLRAD3-204ENST00000529759 RPRD2Q5VT52 1461 aaKnown RBP16.54■□□□□ 0.24
LDLRAD3-204ENST00000529759 TRIM52Q96A61 297 aa16.53■□□□□ 0.24
LDLRAD3-204ENST00000529759 UPF1Q92900 1129 aaKnown RBP eCLIP16.52■□□□□ 0.24
LDLRAD3-204ENST00000529759 BRINP3Q76B58 766 aa16.5■□□□□ 0.23
LDLRAD3-204ENST00000529759 C14orf37Q86TY3 774 aa16.5■□□□□ 0.23
LDLRAD3-204ENST00000529759 DIP2AQ14689 1571 aa16.49■□□□□ 0.23
LDLRAD3-204ENST00000529759 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
LDLRAD3-204ENST00000529759 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
LDLRAD3-204ENST00000529759 AMOTL2Q9Y2J4 779 aa16.49■□□□□ 0.23
LDLRAD3-204ENST00000529759 AHDC1Q5TGY3 1603 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD3-204ENST00000529759 IQGAP3Q86VI3 1631 aa16.48■□□□□ 0.23
LDLRAD3-204ENST00000529759 NUTM2BA6NNL0 878 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD3-204ENST00000529759 NUTM2EB1AL46 878 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD3-204ENST00000529759 NUTM2AQ8IVF1 878 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD3-204ENST00000529759 SHPRHQ149N8 1683 aa16.46■□□□□ 0.23
LDLRAD3-204ENST00000529759 SPATA31A6Q5VVP1 1343 aa16.46■□□□□ 0.23
LDLRAD3-204ENST00000529759 NCOA3Q9Y6Q9 1424 aa16.46■□□□□ 0.23
LDLRAD3-204ENST00000529759 NRXN3Q9Y4C0 1643 aa16.46■□□□□ 0.23
LDLRAD3-204ENST00000529759 MEX3CQ5U5Q3 659 aaKnown RBP16.46■□□□□ 0.23
LDLRAD3-204ENST00000529759 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.46■□□□□ 0.23
LDLRAD3-204ENST00000529759 ATF3P18847 181 aa16.45■□□□□ 0.22
LDLRAD3-204ENST00000529759 HDGFP51858 240 aaKnown RBP16.45■□□□□ 0.22
LDLRAD3-204ENST00000529759 CADPS2Q86UW7 1296 aa16.45■□□□□ 0.22
LDLRAD3-204ENST00000529759 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
LDLRAD3-204ENST00000529759 METP08581 1390 aa16.42■□□□□ 0.22
LDLRAD3-204ENST00000529759 ZNF772Q68DY9 489 aaPredicted RBP16.42■□□□□ 0.22
LDLRAD3-204ENST00000529759 NUP155O75694 1391 aa16.41■□□□□ 0.22
LDLRAD3-204ENST00000529759 PIK3R4Q99570 1358 aa16.41■□□□□ 0.22
LDLRAD3-204ENST00000529759 RXRBP28702 533 aa16.41■□□□□ 0.22
LDLRAD3-204ENST00000529759 ITGAEP38570 1179 aa16.41■□□□□ 0.22
LDLRAD3-204ENST00000529759 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
LDLRAD3-204ENST00000529759 XRN1Q8IZH2 1706 aaKnown RBP16.41■□□□□ 0.22
LDLRAD3-204ENST00000529759 AFF2P51816 1311 aa16.41■□□□□ 0.22
LDLRAD3-204ENST00000529759 TRPM2O94759 1503 aa16.4■□□□□ 0.22
LDLRAD3-204ENST00000529759 ASXL1Q8IXJ9 1541 aa16.4■□□□□ 0.22
LDLRAD3-204ENST00000529759 MST1RQ04912 1400 aa16.4■□□□□ 0.22
LDLRAD3-204ENST00000529759 SPHKAPQ2M3C7 1700 aa16.38■□□□□ 0.21
LDLRAD3-204ENST00000529759 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
LDLRAD3-204ENST00000529759 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
LDLRAD3-204ENST00000529759 SRCAPQ6ZRS2 3230 aa16.36■□□□□ 0.21
LDLRAD3-204ENST00000529759 SETBP1Q9Y6X0 1596 aa16.35■□□□□ 0.21
LDLRAD3-204ENST00000529759 C8orf37Q96NL8 207 aa16.35■□□□□ 0.21
LDLRAD3-204ENST00000529759 NALCNQ8IZF0 1738 aa16.34■□□□□ 0.21
LDLRAD3-204ENST00000529759 QTRT2Q9H974 415 aaKnown RBP16.34■□□□□ 0.21
LDLRAD3-204ENST00000529759 PNPLA6Q8IY17 1366 aa16.34■□□□□ 0.21
LDLRAD3-204ENST00000529759 RGS12O14924 1447 aa16.34■□□□□ 0.21
LDLRAD3-204ENST00000529759 ZNF326Q5BKZ1 582 aaKnown RBP16.33■□□□□ 0.2
LDLRAD3-204ENST00000529759 DCCP43146 1447 aa16.33■□□□□ 0.2
LDLRAD3-204ENST00000529759 CLTCL1P53675 1640 aa16.31■□□□□ 0.2
LDLRAD3-204ENST00000529759 CDK12Q9NYV4 1490 aaPredicted RBP16.31■□□□□ 0.2
LDLRAD3-204ENST00000529759 ADAMTS2O95450 1211 aa16.31■□□□□ 0.2
LDLRAD3-204ENST00000529759 LRRC59Q96AG4 307 aaKnown RBP16.31■□□□□ 0.2
LDLRAD3-204ENST00000529759 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
LDLRAD3-204ENST00000529759 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
LDLRAD3-204ENST00000529759 ADGRL3Q9HAR2 1447 aa16.3■□□□□ 0.2
LDLRAD3-204ENST00000529759 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
LDLRAD3-204ENST00000529759 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
LDLRAD3-204ENST00000529759 ROBO2Q9HCK4 1378 aa16.27■□□□□ 0.2
LDLRAD3-204ENST00000529759 RBM6P78332 1123 aaKnown RBP16.27■□□□□ 0.2
LDLRAD3-204ENST00000529759 NGLY1Q96IV0 654 aa16.26■□□□□ 0.19
LDLRAD3-204ENST00000529759 KIF1BO60333 1816 aa16.25■□□□□ 0.19
LDLRAD3-204ENST00000529759 SOS2Q07890 1332 aaPredicted RBP16.23■□□□□ 0.19
LDLRAD3-204ENST00000529759 LAMC1P11047 1609 aa16.23■□□□□ 0.19
LDLRAD3-204ENST00000529759 NAIPQ13075 1403 aa16.21■□□□□ 0.19
LDLRAD3-204ENST00000529759 EP400Q96L91 3159 aa16.21■□□□□ 0.19
LDLRAD3-204ENST00000529759 XPCQ01831 940 aaPredicted RBP16.2■□□□□ 0.18
LDLRAD3-204ENST00000529759 USP21Q9UK80 565 aa16.2■□□□□ 0.18
LDLRAD3-204ENST00000529759 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
LDLRAD3-204ENST00000529759 HFM1A2PYH4 1435 aa16.17■□□□□ 0.18
LDLRAD3-204ENST00000529759 ATRNO75882 1429 aa16.17■□□□□ 0.18
LDLRAD3-204ENST00000529759 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
LDLRAD3-204ENST00000529759 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
LDLRAD3-204ENST00000529759 NUTM2FA1L443 756 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms