RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 PROSER2Q86WR7 435 aaPredicted RBP24.59■■□□□ 1.53
TRIM3-209ENST00000529529 GCC2Q8IWJ2 1684 aa24.58■■□□□ 1.53
TRIM3-209ENST00000529529 RIMS2Q9UQ26 1411 aa24.57■■□□□ 1.52
TRIM3-209ENST00000529529 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.56■■□□□ 1.52
TRIM3-209ENST00000529529 RBM33Q96EV2 1170 aaKnown RBP24.56■■□□□ 1.52
TRIM3-209ENST00000529529 TMEM94Q12767 1356 aa24.55■■□□□ 1.52
TRIM3-209ENST00000529529 ZFYVE9O95405 1425 aa24.55■■□□□ 1.52
TRIM3-209ENST00000529529 NUTM2DQ5VT03 806 aaPredicted RBP24.55■■□□□ 1.52
TRIM3-209ENST00000529529 E9PCH4 1651 aa24.55■■□□□ 1.52
TRIM3-209ENST00000529529 IQGAP3Q86VI3 1631 aa24.54■■□□□ 1.52
TRIM3-209ENST00000529529 PLEKHG1Q9ULL1 1385 aa24.54■■□□□ 1.52
TRIM3-209ENST00000529529 TMEM131LA2VDJ0 1609 aa24.53■■□□□ 1.52
TRIM3-209ENST00000529529 RRBP1Q9P2E9 1410 aaKnown RBP24.52■■□□□ 1.52
TRIM3-209ENST00000529529 SOCS7O14512 581 aa24.5■■□□□ 1.51
TRIM3-209ENST00000529529 TBX22Q9Y458 520 aa24.5■■□□□ 1.51
TRIM3-209ENST00000529529 MYO5BQ9ULV0 1848 aa24.48■■□□□ 1.51
TRIM3-209ENST00000529529 XIRP1Q702N8 1843 aaKnown RBP24.47■■□□□ 1.51
TRIM3-209ENST00000529529 NKTRP30414 1462 aaKnown RBP24.43■■□□□ 1.5
TRIM3-209ENST00000529529 NAIPQ13075 1403 aa24.43■■□□□ 1.5
TRIM3-209ENST00000529529 ZNF326Q5BKZ1 582 aaKnown RBP24.42■■□□□ 1.5
TRIM3-209ENST00000529529 TRIM52Q96A61 297 aa24.42■■□□□ 1.5
TRIM3-209ENST00000529529 FAM135BQ49AJ0 1406 aa24.42■■□□□ 1.5
TRIM3-209ENST00000529529 NWD1Q149M9 1564 aa24.41■■□□□ 1.5
TRIM3-209ENST00000529529 MED1Q15648 1581 aaPredicted RBP24.41■■□□□ 1.5
TRIM3-209ENST00000529529 ADAMTS13Q76LX8 1427 aa24.4■■□□□ 1.5
TRIM3-209ENST00000529529 MSH6P52701 1360 aa24.4■■□□□ 1.5
TRIM3-209ENST00000529529 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
TRIM3-209ENST00000529529 SLAIN2Q9P270 581 aa24.38■■□□□ 1.49
TRIM3-209ENST00000529529 C14orf37Q86TY3 774 aa24.37■■□□□ 1.49
TRIM3-209ENST00000529529 CHD2O14647 1828 aaKnown RBP24.36■■□□□ 1.49
TRIM3-209ENST00000529529 AMOTL2Q9Y2J4 779 aa24.35■■□□□ 1.49
TRIM3-209ENST00000529529 PIK3R4Q99570 1358 aa24.34■■□□□ 1.49
TRIM3-209ENST00000529529 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
TRIM3-209ENST00000529529 SLC4A1APQ9BWU0 796 aaKnown RBP24.32■■□□□ 1.48
TRIM3-209ENST00000529529 HFM1A2PYH4 1435 aa24.32■■□□□ 1.48
TRIM3-209ENST00000529529 DIP2AQ14689 1571 aa24.3■■□□□ 1.48
TRIM3-209ENST00000529529 NCOA3Q9Y6Q9 1424 aa24.3■■□□□ 1.48
TRIM3-209ENST00000529529 C19orf44Q9H6X5 657 aa24.3■■□□□ 1.48
TRIM3-209ENST00000529529 ROBO1Q9Y6N7 1651 aa24.27■■□□□ 1.48
TRIM3-209ENST00000529529 PTPRUQ92729 1446 aa24.27■■□□□ 1.48
TRIM3-209ENST00000529529 TRPM2O94759 1503 aa24.27■■□□□ 1.48
TRIM3-209ENST00000529529 ATF3P18847 181 aa24.27■■□□□ 1.48
TRIM3-209ENST00000529529 CADPS2Q86UW7 1296 aa24.26■■□□□ 1.47
TRIM3-209ENST00000529529 CLTCL1P53675 1640 aa24.25■■□□□ 1.47
TRIM3-209ENST00000529529 METP08581 1390 aa24.23■■□□□ 1.47
TRIM3-209ENST00000529529 VGFO15240 615 aaPredicted RBP24.21■■□□□ 1.47
TRIM3-209ENST00000529529 FOXD1Q16676 465 aa24.21■■□□□ 1.47
TRIM3-209ENST00000529529 SETBP1Q9Y6X0 1596 aa24.2■■□□□ 1.47
TRIM3-209ENST00000529529 RGS17Q9UGC6 210 aaPredicted RBP24.2■■□□□ 1.46
TRIM3-209ENST00000529529 NRXN3Q9Y4C0 1643 aa24.19■■□□□ 1.46
TRIM3-209ENST00000529529 NEXMIFQ5QGS0 1516 aa24.19■■□□□ 1.46
TRIM3-209ENST00000529529 RPGRIP1LQ68CZ1 1315 aa24.17■■□□□ 1.46
TRIM3-209ENST00000529529 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.16■■□□□ 1.46
TRIM3-209ENST00000529529 KIF1BO60333 1816 aa24.16■■□□□ 1.46
TRIM3-209ENST00000529529 MPHOSPH9Q99550 1183 aa24.15■■□□□ 1.46
TRIM3-209ENST00000529529 JCADQ9P266 1359 aa24.14■■□□□ 1.45
TRIM3-209ENST00000529529 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
TRIM3-209ENST00000529529 BRINP3Q76B58 766 aa24.12■■□□□ 1.45
TRIM3-209ENST00000529529 XRN1Q8IZH2 1706 aaKnown RBP24.11■■□□□ 1.45
TRIM3-209ENST00000529529 RGL3Q3MIN7 710 aa24.09■■□□□ 1.45
TRIM3-209ENST00000529529 DCCP43146 1447 aa24.08■■□□□ 1.44
TRIM3-209ENST00000529529 POTEAQ6S8J7 498 aa24.07■■□□□ 1.44
TRIM3-209ENST00000529529 CCDC144AA2RUR9 1427 aa24.06■■□□□ 1.44
TRIM3-209ENST00000529529 COL16A1Q07092 1604 aaPredicted RBP24.05■■□□□ 1.44
TRIM3-209ENST00000529529 MST1RQ04912 1400 aa24.04■■□□□ 1.44
TRIM3-209ENST00000529529 ADGRL3Q9HAR2 1447 aa24.03■■□□□ 1.44
TRIM3-209ENST00000529529 SPATA31A6Q5VVP1 1343 aa24.03■■□□□ 1.44
TRIM3-209ENST00000529529 ACIN1Q9UKV3 1341 aaKnown RBP24.03■■□□□ 1.44
TRIM3-209ENST00000529529 SETD5Q9C0A6 1442 aa24.02■■□□□ 1.44
TRIM3-209ENST00000529529 ADGRF5Q8IZF2 1346 aa24.02■■□□□ 1.44
TRIM3-209ENST00000529529 AHDC1Q5TGY3 1603 aaPredicted RBP24.02■■□□□ 1.44
TRIM3-209ENST00000529529 ROBO2Q9HCK4 1378 aa24.02■■□□□ 1.44
TRIM3-209ENST00000529529 MEX3CQ5U5Q3 659 aaKnown RBP24■■□□□ 1.43
TRIM3-209ENST00000529529 DDX17Q92841 729 aaKnown RBP23.99■■□□□ 1.43
TRIM3-209ENST00000529529 NUTM2BA6NNL0 878 aaPredicted RBP23.98■■□□□ 1.43
TRIM3-209ENST00000529529 NUTM2EB1AL46 878 aaPredicted RBP23.98■■□□□ 1.43
TRIM3-209ENST00000529529 NUTM2AQ8IVF1 878 aaPredicted RBP23.98■■□□□ 1.43
TRIM3-209ENST00000529529 SPATA31E1Q6ZUB1 1445 aa23.98■■□□□ 1.43
TRIM3-209ENST00000529529 ASXL1Q8IXJ9 1541 aa23.98■■□□□ 1.43
TRIM3-209ENST00000529529 PPLO60437 1756 aa23.98■■□□□ 1.43
TRIM3-209ENST00000529529 PTCH1Q13635 1447 aa23.97■■□□□ 1.43
TRIM3-209ENST00000529529 LRRC59Q96AG4 307 aaKnown RBP23.97■■□□□ 1.43
TRIM3-209ENST00000529529 ANKRD30BQ9BXX2 1392 aa23.96■■□□□ 1.43
TRIM3-209ENST00000529529 STK26Q9P289 416 aa23.96■■□□□ 1.43
TRIM3-209ENST00000529529 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
TRIM3-209ENST00000529529 LRP6O75581 1613 aa23.95■■□□□ 1.42
TRIM3-209ENST00000529529 ORAI2Q96SN7 254 aa23.94■■□□□ 1.42
TRIM3-209ENST00000529529 NALCNQ8IZF0 1738 aa23.93■■□□□ 1.42
TRIM3-209ENST00000529529 TMEM132EQ6IEE7 984 aa23.93■■□□□ 1.42
TRIM3-209ENST00000529529 C1orf167Q5SNV9 1468 aa23.93■■□□□ 1.42
TRIM3-209ENST00000529529 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
TRIM3-209ENST00000529529 PRAG1Q86YV5 1406 aa23.91■■□□□ 1.42
TRIM3-209ENST00000529529 ZNF772Q68DY9 489 aaPredicted RBP23.9■■□□□ 1.42
TRIM3-209ENST00000529529 WAPLQ7Z5K2 1190 aa23.9■■□□□ 1.42
TRIM3-209ENST00000529529 SHPRHQ149N8 1683 aa23.89■■□□□ 1.42
TRIM3-209ENST00000529529 LRPPRCP42704 1394 aaKnown RBP23.87■■□□□ 1.41
TRIM3-209ENST00000529529 NHSL1Q5SYE7 1610 aa23.87■■□□□ 1.41
TRIM3-209ENST00000529529 ESCO1Q5FWF5 840 aa23.85■■□□□ 1.41
TRIM3-209ENST00000529529 ABCC11Q96J66 1382 aa23.85■■□□□ 1.41
TRIM3-209ENST00000529529 C14orf93Q9H972 538 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms