RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
CHD7-209ENST00000529472 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
CHD7-209ENST00000529472 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
CHD7-209ENST00000529472 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
CHD7-209ENST00000529472 ANKLE2Q86XL3 938 aa16.6■□□□□ 0.25
CHD7-209ENST00000529472 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
CHD7-209ENST00000529472 NEXMIFQ5QGS0 1516 aa16.6■□□□□ 0.25
CHD7-209ENST00000529472 LTKP29376 864 aa16.59■□□□□ 0.25
CHD7-209ENST00000529472 PPLO60437 1756 aa16.59■□□□□ 0.25
CHD7-209ENST00000529472 PPP1R15AO75807 674 aaPredicted RBP16.58■□□□□ 0.24
CHD7-209ENST00000529472 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
CHD7-209ENST00000529472 IFT172Q9UG01 1749 aa16.57■□□□□ 0.24
CHD7-209ENST00000529472 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
CHD7-209ENST00000529472 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.56■□□□□ 0.24
CHD7-209ENST00000529472 IQGAP1P46940 1657 aa16.56■□□□□ 0.24
CHD7-209ENST00000529472 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
CHD7-209ENST00000529472 RPGRIP1LQ68CZ1 1315 aa16.55■□□□□ 0.24
CHD7-209ENST00000529472 MED14O60244 1454 aa16.54■□□□□ 0.24
CHD7-209ENST00000529472 BCANQ96GW7 911 aa16.53■□□□□ 0.24
CHD7-209ENST00000529472 PLEKHG1Q9ULL1 1385 aa16.52■□□□□ 0.24
CHD7-209ENST00000529472 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
CHD7-209ENST00000529472 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
CHD7-209ENST00000529472 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
CHD7-209ENST00000529472 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
CHD7-209ENST00000529472 ADGRF5Q8IZF2 1346 aa16.49■□□□□ 0.23
CHD7-209ENST00000529472 MYOM2P54296 1465 aa16.49■□□□□ 0.23
CHD7-209ENST00000529472 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
CHD7-209ENST00000529472 SETBP1Q9Y6X0 1596 aa16.49■□□□□ 0.23
CHD7-209ENST00000529472 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
CHD7-209ENST00000529472 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
CHD7-209ENST00000529472 L3MBTL2Q969R5 705 aa16.48■□□□□ 0.23
CHD7-209ENST00000529472 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
CHD7-209ENST00000529472 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
CHD7-209ENST00000529472 ADAMTS13Q76LX8 1427 aa16.45■□□□□ 0.22
CHD7-209ENST00000529472 NRXN1Q9ULB1 1477 aa16.45■□□□□ 0.22
CHD7-209ENST00000529472 DIP2AQ14689 1571 aa16.45■□□□□ 0.22
CHD7-209ENST00000529472 ALKQ9UM73 1620 aa16.44■□□□□ 0.22
CHD7-209ENST00000529472 SETD1AO15047 1707 aaKnown RBP16.42■□□□□ 0.22
CHD7-209ENST00000529472 STAC3Q96MF2 364 aa16.41■□□□□ 0.22
CHD7-209ENST00000529472 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
CHD7-209ENST00000529472 LAMC1P11047 1609 aa16.41■□□□□ 0.22
CHD7-209ENST00000529472 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
CHD7-209ENST00000529472 ZNF335Q9H4Z2 1342 aaPredicted RBP16.4■□□□□ 0.22
CHD7-209ENST00000529472 METP08581 1390 aa16.39■□□□□ 0.21
CHD7-209ENST00000529472 CFAP70Q5T0N1 1121 aa16.39■□□□□ 0.21
CHD7-209ENST00000529472 STRCP1A6NGW2 1772 aa16.38■□□□□ 0.21
CHD7-209ENST00000529472 ASXL1Q8IXJ9 1541 aa16.37■□□□□ 0.21
CHD7-209ENST00000529472 C14orf93Q9H972 538 aaKnown RBP16.37■□□□□ 0.21
CHD7-209ENST00000529472 CHD2O14647 1828 aaKnown RBP16.37■□□□□ 0.21
CHD7-209ENST00000529472 PTPRUQ92729 1446 aa16.36■□□□□ 0.21
CHD7-209ENST00000529472 NWD1Q149M9 1564 aa16.35■□□□□ 0.21
CHD7-209ENST00000529472 TMEM132EQ6IEE7 984 aa16.35■□□□□ 0.21
CHD7-209ENST00000529472 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
CHD7-209ENST00000529472 KIAA1210Q9ULL0 1709 aa16.35■□□□□ 0.21
CHD7-209ENST00000529472 PIK3R4Q99570 1358 aa16.35■□□□□ 0.21
CHD7-209ENST00000529472 TRPM1Q7Z4N2 1603 aa16.34■□□□□ 0.21
CHD7-209ENST00000529472 NBPF8Q3BBV2 869 aa16.34■□□□□ 0.21
CHD7-209ENST00000529472 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.21
CHD7-209ENST00000529472 KCNA6P17658 529 aa16.33■□□□□ 0.2
CHD7-209ENST00000529472 ADGRB1O14514 1584 aa16.33■□□□□ 0.2
CHD7-209ENST00000529472 LTBP4Q8N2S1 1624 aa16.32■□□□□ 0.2
CHD7-209ENST00000529472 STK26Q9P289 416 aa16.32■□□□□ 0.2
CHD7-209ENST00000529472 AMOTL2Q9Y2J4 779 aa16.32■□□□□ 0.2
CHD7-209ENST00000529472 CPS1P31327 1500 aa16.31■□□□□ 0.2
CHD7-209ENST00000529472 NKTRP30414 1462 aaKnown RBP16.31■□□□□ 0.2
CHD7-209ENST00000529472 NBPF1Q3BBV0 1214 aa16.31■□□□□ 0.2
CHD7-209ENST00000529472 YTHDC2Q9H6S0 1430 aaKnown RBP16.3■□□□□ 0.2
CHD7-209ENST00000529472 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
CHD7-209ENST00000529472 ROCK2O75116 1388 aaKnown RBP16.29■□□□□ 0.2
CHD7-209ENST00000529472 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
CHD7-209ENST00000529472 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
CHD7-209ENST00000529472 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
CHD7-209ENST00000529472 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
CHD7-209ENST00000529472 LRRC7Q96NW7 1537 aa16.27■□□□□ 0.2
CHD7-209ENST00000529472 PTCH1Q13635 1447 aa16.27■□□□□ 0.19
CHD7-209ENST00000529472 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
CHD7-209ENST00000529472 TRAK1Q9UPV9 953 aa16.26■□□□□ 0.19
CHD7-209ENST00000529472 TECPR2O15040 1411 aa16.26■□□□□ 0.19
CHD7-209ENST00000529472 ABCC11Q96J66 1382 aa16.26■□□□□ 0.19
CHD7-209ENST00000529472 TMEM94Q12767 1356 aa16.25■□□□□ 0.19
CHD7-209ENST00000529472 XIRP1Q702N8 1843 aaKnown RBP16.24■□□□□ 0.19
CHD7-209ENST00000529472 ARHGEF28Q8N1W1 1705 aaKnown RBP16.24■□□□□ 0.19
CHD7-209ENST00000529472 CARD11Q9BXL7 1154 aa16.23■□□□□ 0.19
CHD7-209ENST00000529472 GPRASP1Q5JY77 1395 aa16.23■□□□□ 0.19
CHD7-209ENST00000529472 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
CHD7-209ENST00000529472 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
CHD7-209ENST00000529472 DLC1Q96QB1 1528 aa16.22■□□□□ 0.19
CHD7-209ENST00000529472 PLEKHH1Q9ULM0 1364 aa16.22■□□□□ 0.19
CHD7-209ENST00000529472 SAFB2Q14151 953 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHD7-209ENST00000529472 PRAM1Q96QH2 718 aa16.21■□□□□ 0.19
CHD7-209ENST00000529472 FAM135BQ49AJ0 1406 aa16.2■□□□□ 0.18
CHD7-209ENST00000529472 NALCNQ8IZF0 1738 aa16.2■□□□□ 0.18
CHD7-209ENST00000529472 CERKQ8TCT0 537 aa16.2■□□□□ 0.18
CHD7-209ENST00000529472 POGKQ9P215 609 aa16.2■□□□□ 0.18
CHD7-209ENST00000529472 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.17■□□□□ 0.18
CHD7-209ENST00000529472 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
CHD7-209ENST00000529472 SIRT1Q96EB6 747 aa16.17■□□□□ 0.18
CHD7-209ENST00000529472 ADGRL3Q9HAR2 1447 aa16.17■□□□□ 0.18
CHD7-209ENST00000529472 NCOA3Q9Y6Q9 1424 aa16.17■□□□□ 0.18
CHD7-209ENST00000529472 QRICH2Q9H0J4 1663 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms