RNA–Protein interactions for RNA: ENST00000528507.1

AP003555.2-201, humanhuman

TSL 3 BASIC

Gene AP003555.2, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.2-201ENST00000528507 SOCS7O14512 581 aa10.9□□□□□ -0.66
AP003555.2-201ENST00000528507 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
AP003555.2-201ENST00000528507 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.66
AP003555.2-201ENST00000528507 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
AP003555.2-201ENST00000528507 PDE4AP27815 886 aa10.89□□□□□ -0.67
AP003555.2-201ENST00000528507 GPIHBP1Q8IV16 184 aa10.89□□□□□ -0.67
AP003555.2-201ENST00000528507 ATP10AO60312 1499 aa10.88□□□□□ -0.67
AP003555.2-201ENST00000528507 CAMSAP2Q08AD1 1489 aa10.88□□□□□ -0.67
AP003555.2-201ENST00000528507 RSPH4AQ5TD94 716 aa10.88□□□□□ -0.67
AP003555.2-201ENST00000528507 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
AP003555.2-201ENST00000528507 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
AP003555.2-201ENST00000528507 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
AP003555.2-201ENST00000528507 ARHGEF12Q9NZN5 1544 aa10.88□□□□□ -0.67
AP003555.2-201ENST00000528507 PREX2Q70Z35 1606 aa10.87□□□□□ -0.67
AP003555.2-201ENST00000528507 PLEKHH2Q8IVE3 1493 aa10.87□□□□□ -0.67
AP003555.2-201ENST00000528507 CDC42BPAQ5VT25 1732 aa10.87□□□□□ -0.67
AP003555.2-201ENST00000528507 HRCP23327 699 aa10.87□□□□□ -0.67
AP003555.2-201ENST00000528507 ARIH1Q9Y4X5 557 aaPredicted RBP10.87□□□□□ -0.67
AP003555.2-201ENST00000528507 AFAP1Q8N556 730 aa10.86□□□□□ -0.67
AP003555.2-201ENST00000528507 PREX1Q8TCU6 1659 aa10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 SPAG9O60271 1321 aaKnown RBP10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 UHRF1BP1Q6BDS2 1440 aa10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 RRBP1Q9P2E9 1410 aaKnown RBP10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 CDC42BPBQ9Y5S2 1711 aa10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 SOX12O15370 315 aa10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 RBM42Q9BTD8 480 aaKnown RBP10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 RRP7BPQ9NSQ0 103 aa10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 STRCQ7RTU9 1775 aa10.85□□□□□ -0.67
AP003555.2-201ENST00000528507 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
AP003555.2-201ENST00000528507 SYCP2Q9BX26 1530 aa10.84□□□□□ -0.67
AP003555.2-201ENST00000528507 PDE4DQ08499 809 aa10.83□□□□□ -0.68
AP003555.2-201ENST00000528507 MFSD10Q14728 455 aa10.83□□□□□ -0.68
AP003555.2-201ENST00000528507 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
AP003555.2-201ENST00000528507 SAMD9LQ8IVG5 1584 aa10.82□□□□□ -0.68
AP003555.2-201ENST00000528507 TRIM66O15016 1216 aa10.82□□□□□ -0.68
AP003555.2-201ENST00000528507 EFCAB3Q8N7B9 438 aa10.82□□□□□ -0.68
AP003555.2-201ENST00000528507 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
AP003555.2-201ENST00000528507 DAPK1P53355 1430 aa10.82□□□□□ -0.68
AP003555.2-201ENST00000528507 SPATA31D1Q6ZQQ2 1576 aa10.82□□□□□ -0.68
AP003555.2-201ENST00000528507 TCOF1Q13428 1488 aaKnown RBP10.81□□□□□ -0.68
AP003555.2-201ENST00000528507 CCDC141Q6ZP82 1450 aa10.81□□□□□ -0.68
AP003555.2-201ENST00000528507 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
AP003555.2-201ENST00000528507 KIAA1107Q9UPP5 1409 aa10.81□□□□□ -0.68
AP003555.2-201ENST00000528507 ZNF518AQ6AHZ1 1483 aa10.81□□□□□ -0.68
AP003555.2-201ENST00000528507 ANKRD30AQ9BXX3 1397 aa10.8□□□□□ -0.68
AP003555.2-201ENST00000528507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
AP003555.2-201ENST00000528507 TRIM52Q96A61 297 aa10.8□□□□□ -0.68
AP003555.2-201ENST00000528507 ESF1Q9H501 851 aaKnown RBP10.8□□□□□ -0.68
AP003555.2-201ENST00000528507 TRAPPC8Q9Y2L5 1435 aa10.8□□□□□ -0.68
AP003555.2-201ENST00000528507 ABCC1P33527 1531 aa10.79□□□□□ -0.68
AP003555.2-201ENST00000528507 PTPRTO14522 1441 aa10.79□□□□□ -0.68
AP003555.2-201ENST00000528507 ABCC5O15440 1437 aa10.79□□□□□ -0.68
AP003555.2-201ENST00000528507 MKRN3Q13064 507 aaKnown RBP10.79□□□□□ -0.68
AP003555.2-201ENST00000528507 REM2Q8IYK8 340 aaPredicted RBP10.79□□□□□ -0.68
AP003555.2-201ENST00000528507 DIP2CQ9Y2E4 1556 aa10.78□□□□□ -0.68
AP003555.2-201ENST00000528507 ZBTB7CA1YPR0 619 aa10.78□□□□□ -0.68
AP003555.2-201ENST00000528507 C1orf115Q9H7X2 142 aa10.78□□□□□ -0.68
AP003555.2-201ENST00000528507 CABP2Q9NPB3 220 aa10.78□□□□□ -0.68
AP003555.2-201ENST00000528507 KDM5CP41229 1560 aa10.77□□□□□ -0.68
AP003555.2-201ENST00000528507 LTBP4Q8N2S1 1624 aa10.77□□□□□ -0.68
AP003555.2-201ENST00000528507 APBB1O00213 710 aa10.77□□□□□ -0.69
AP003555.2-201ENST00000528507 DNMT1P26358 1616 aaKnown RBP10.76□□□□□ -0.69
AP003555.2-201ENST00000528507 ABCA6Q8N139 1617 aa10.76□□□□□ -0.69
AP003555.2-201ENST00000528507 C3P01024 1663 aa10.76□□□□□ -0.69
AP003555.2-201ENST00000528507 ZNF316A6NFI3 1004 aaPredicted RBP10.76□□□□□ -0.69
AP003555.2-201ENST00000528507 PDIA4P13667 645 aaKnown RBP10.76□□□□□ -0.69
AP003555.2-201ENST00000528507 FLIIQ13045 1269 aa10.76□□□□□ -0.69
AP003555.2-201ENST00000528507 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
AP003555.2-201ENST00000528507 SETD1BQ9UPS6 1966 aaKnown RBP10.76□□□□□ -0.69
AP003555.2-201ENST00000528507 MBD5Q9P267 1494 aa10.75□□□□□ -0.69
AP003555.2-201ENST00000528507 ARHGEF5Q12774 1597 aa10.75□□□□□ -0.69
AP003555.2-201ENST00000528507 MLLT3P42568 568 aaPredicted RBP10.75□□□□□ -0.69
AP003555.2-201ENST00000528507 CRISPLD2Q9H0B8 497 aa10.75□□□□□ -0.69
AP003555.2-201ENST00000528507 KIF15Q9NS87 1388 aa10.75□□□□□ -0.69
AP003555.2-201ENST00000528507 NCOA1Q15788 1441 aa10.75□□□□□ -0.69
AP003555.2-201ENST00000528507 MLH3Q9UHC1 1453 aa10.74□□□□□ -0.69
AP003555.2-201ENST00000528507 ZNF335Q9H4Z2 1342 aaPredicted RBP10.74□□□□□ -0.69
AP003555.2-201ENST00000528507 UBAP1LF5GYI3 381 aa10.73□□□□□ -0.69
AP003555.2-201ENST00000528507 KIF3BO15066 747 aa10.73□□□□□ -0.69
AP003555.2-201ENST00000528507 GGT6Q6P531 493 aa10.73□□□□□ -0.69
AP003555.2-201ENST00000528507 CCDC9Q9Y3X0 531 aaKnown RBP10.73□□□□□ -0.69
AP003555.2-201ENST00000528507 PTPRKQ15262 1439 aa10.73□□□□□ -0.69
AP003555.2-201ENST00000528507 REREQ9P2R6 1566 aa10.73□□□□□ -0.69
AP003555.2-201ENST00000528507 DDRGK1Q96HY6 314 aa10.72□□□□□ -0.69
AP003555.2-201ENST00000528507 FAM117AQ9C073 453 aa10.72□□□□□ -0.69
AP003555.2-201ENST00000528507 SETD5Q9C0A6 1442 aa10.72□□□□□ -0.69
AP003555.2-201ENST00000528507 AGLP35573 1532 aa10.72□□□□□ -0.69
AP003555.2-201ENST00000528507 ATP7AQ04656 1500 aa10.72□□□□□ -0.69
AP003555.2-201ENST00000528507 CAMSAP1Q5T5Y3 1602 aa10.72□□□□□ -0.69
AP003555.2-201ENST00000528507 RTEL1-TNFRSF6BF6WH68 1400 aa10.71□□□□□ -0.69
AP003555.2-201ENST00000528507 SHANK2Q9UPX8 1470 aa10.71□□□□□ -0.69
AP003555.2-201ENST00000528507 IQSEC2Q5JU85 1478 aa10.7□□□□□ -0.7
AP003555.2-201ENST00000528507 CNTLNQ9NXG0 1405 aa10.7□□□□□ -0.7
AP003555.2-201ENST00000528507 ROCK1Q13464 1354 aa10.7□□□□□ -0.7
AP003555.2-201ENST00000528507 CCDC61Q9Y6R9 512 aa10.7□□□□□ -0.7
AP003555.2-201ENST00000528507 ANKRD50Q9ULJ7 1429 aa10.69□□□□□ -0.7
AP003555.2-201ENST00000528507 ZMYM3Q14202 1370 aa10.69□□□□□ -0.7
AP003555.2-201ENST00000528507 KANK1Q14678 1352 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms