RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 TET3O43151 1660 aa22.94■■□□□ 1.26
PUF60-212ENST00000528320 TMEM94Q12767 1356 aa22.94■■□□□ 1.26
PUF60-212ENST00000528320 PROSER2Q86WR7 435 aaPredicted RBP22.92■■□□□ 1.26
PUF60-212ENST00000528320 NAIPQ13075 1403 aa22.91■■□□□ 1.26
PUF60-212ENST00000528320 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
PUF60-212ENST00000528320 RGS17Q9UGC6 210 aaPredicted RBP22.89■■□□□ 1.25
PUF60-212ENST00000528320 NUP155O75694 1391 aa22.89■■□□□ 1.25
PUF60-212ENST00000528320 ADGRB3O60242 1522 aa22.88■■□□□ 1.25
PUF60-212ENST00000528320 HDGFP51858 240 aaKnown RBP22.87■■□□□ 1.25
PUF60-212ENST00000528320 BCANQ96GW7 911 aa22.87■■□□□ 1.25
PUF60-212ENST00000528320 RBM33Q96EV2 1170 aaKnown RBP22.86■■□□□ 1.25
PUF60-212ENST00000528320 GCC2Q8IWJ2 1684 aa22.86■■□□□ 1.25
PUF60-212ENST00000528320 HFM1A2PYH4 1435 aa22.85■■□□□ 1.25
PUF60-212ENST00000528320 NKTRP30414 1462 aaKnown RBP22.84■■□□□ 1.25
PUF60-212ENST00000528320 E9PCH4 1651 aa22.84■■□□□ 1.25
PUF60-212ENST00000528320 ZFYVE9O95405 1425 aa22.82■■□□□ 1.24
PUF60-212ENST00000528320 NWD1Q149M9 1564 aa22.81■■□□□ 1.24
PUF60-212ENST00000528320 PLEKHG1Q9ULL1 1385 aa22.81■■□□□ 1.24
PUF60-212ENST00000528320 MSH6P52701 1360 aa22.8■■□□□ 1.24
PUF60-212ENST00000528320 SLAIN2Q9P270 581 aa22.8■■□□□ 1.24
PUF60-212ENST00000528320 PPP1R15AO75807 674 aaPredicted RBP22.79■■□□□ 1.24
PUF60-212ENST00000528320 TBX22Q9Y458 520 aa22.79■■□□□ 1.24
PUF60-212ENST00000528320 RIMS2Q9UQ26 1411 aa22.79■■□□□ 1.24
PUF60-212ENST00000528320 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.78■■□□□ 1.24
PUF60-212ENST00000528320 ROBO1Q9Y6N7 1651 aa22.77■■□□□ 1.24
PUF60-212ENST00000528320 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
PUF60-212ENST00000528320 TMEM131LA2VDJ0 1609 aa22.75■■□□□ 1.23
PUF60-212ENST00000528320 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
PUF60-212ENST00000528320 CHGAP10645 457 aaKnown RBP22.73■■□□□ 1.23
PUF60-212ENST00000528320 POTEAQ6S8J7 498 aa22.73■■□□□ 1.23
PUF60-212ENST00000528320 MYO5BQ9ULV0 1848 aa22.73■■□□□ 1.23
PUF60-212ENST00000528320 NCOA3Q9Y6Q9 1424 aa22.73■■□□□ 1.23
PUF60-212ENST00000528320 PIK3R4Q99570 1358 aa22.68■■□□□ 1.22
PUF60-212ENST00000528320 JCADQ9P266 1359 aa22.68■■□□□ 1.22
PUF60-212ENST00000528320 ADAMTS13Q76LX8 1427 aa22.67■■□□□ 1.22
PUF60-212ENST00000528320 NUTM2DQ5VT03 806 aaPredicted RBP22.67■■□□□ 1.22
PUF60-212ENST00000528320 C19orf44Q9H6X5 657 aa22.67■■□□□ 1.22
PUF60-212ENST00000528320 C14orf37Q86TY3 774 aa22.66■■□□□ 1.22
PUF60-212ENST00000528320 CADPS2Q86UW7 1296 aa22.65■■□□□ 1.22
PUF60-212ENST00000528320 PHLPP1O60346 1717 aa22.64■■□□□ 1.21
PUF60-212ENST00000528320 SPHKAPQ2M3C7 1700 aa22.63■■□□□ 1.21
PUF60-212ENST00000528320 DIP2AQ14689 1571 aa22.63■■□□□ 1.21
PUF60-212ENST00000528320 ATF3P18847 181 aa22.62■■□□□ 1.21
PUF60-212ENST00000528320 TRPM2O94759 1503 aa22.62■■□□□ 1.21
PUF60-212ENST00000528320 AMOTL2Q9Y2J4 779 aa22.61■■□□□ 1.21
PUF60-212ENST00000528320 TRIM52Q96A61 297 aa22.59■■□□□ 1.21
PUF60-212ENST00000528320 SPATA31A6Q5VVP1 1343 aa22.58■■□□□ 1.21
PUF60-212ENST00000528320 SLC4A1APQ9BWU0 796 aaKnown RBP22.58■■□□□ 1.21
PUF60-212ENST00000528320 COL16A1Q07092 1604 aaPredicted RBP22.57■■□□□ 1.2
PUF60-212ENST00000528320 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.57■■□□□ 1.2
PUF60-212ENST00000528320 CLTCL1P53675 1640 aa22.56■■□□□ 1.2
PUF60-212ENST00000528320 PTPRUQ92729 1446 aa22.56■■□□□ 1.2
PUF60-212ENST00000528320 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
PUF60-212ENST00000528320 ACIN1Q9UKV3 1341 aaKnown RBP22.54■■□□□ 1.2
PUF60-212ENST00000528320 MPHOSPH9Q99550 1183 aa22.53■■□□□ 1.2
PUF60-212ENST00000528320 AHDC1Q5TGY3 1603 aaPredicted RBP22.53■■□□□ 1.2
PUF60-212ENST00000528320 BRINP3Q76B58 766 aa22.52■■□□□ 1.2
PUF60-212ENST00000528320 MEX3CQ5U5Q3 659 aaKnown RBP22.51■■□□□ 1.19
PUF60-212ENST00000528320 ZNF772Q68DY9 489 aaPredicted RBP22.51■■□□□ 1.19
PUF60-212ENST00000528320 DCCP43146 1447 aa22.5■■□□□ 1.19
PUF60-212ENST00000528320 ZNF326Q5BKZ1 582 aaKnown RBP22.5■■□□□ 1.19
PUF60-212ENST00000528320 LRP6O75581 1613 aa22.49■■□□□ 1.19
PUF60-212ENST00000528320 NEXMIFQ5QGS0 1516 aa22.48■■□□□ 1.19
PUF60-212ENST00000528320 SETBP1Q9Y6X0 1596 aa22.48■■□□□ 1.19
PUF60-212ENST00000528320 FOXD1Q16676 465 aa22.48■■□□□ 1.19
PUF60-212ENST00000528320 NRXN3Q9Y4C0 1643 aa22.47■■□□□ 1.19
PUF60-212ENST00000528320 HRCP23327 699 aa22.47■■□□□ 1.19
PUF60-212ENST00000528320 METP08581 1390 aa22.46■■□□□ 1.19
PUF60-212ENST00000528320 RAB3GAP2Q9H2M9 1393 aa22.46■■□□□ 1.19
PUF60-212ENST00000528320 SHPRHQ149N8 1683 aa22.46■■□□□ 1.19
PUF60-212ENST00000528320 RPGRIP1LQ68CZ1 1315 aa22.44■■□□□ 1.18
PUF60-212ENST00000528320 XRN1Q8IZH2 1706 aaKnown RBP22.44■■□□□ 1.18
PUF60-212ENST00000528320 SPATA31E1Q6ZUB1 1445 aa22.43■■□□□ 1.18
PUF60-212ENST00000528320 KIF1BO60333 1816 aa22.43■■□□□ 1.18
PUF60-212ENST00000528320 MST1RQ04912 1400 aa22.42■■□□□ 1.18
PUF60-212ENST00000528320 LRRC59Q96AG4 307 aaKnown RBP22.41■■□□□ 1.18
PUF60-212ENST00000528320 ASXL1Q8IXJ9 1541 aa22.41■■□□□ 1.18
PUF60-212ENST00000528320 SETD1AO15047 1707 aaKnown RBP22.4■■□□□ 1.18
PUF60-212ENST00000528320 NUTM2BA6NNL0 878 aaPredicted RBP22.4■■□□□ 1.18
PUF60-212ENST00000528320 NUTM2EB1AL46 878 aaPredicted RBP22.4■■□□□ 1.18
PUF60-212ENST00000528320 NUTM2AQ8IVF1 878 aaPredicted RBP22.4■■□□□ 1.18
PUF60-212ENST00000528320 RXRBP28702 533 aa22.39■■□□□ 1.17
PUF60-212ENST00000528320 VGFO15240 615 aaPredicted RBP22.38■■□□□ 1.17
PUF60-212ENST00000528320 ADGRL3Q9HAR2 1447 aa22.38■■□□□ 1.17
PUF60-212ENST00000528320 UPF1Q92900 1129 aaKnown RBP eCLIP22.37■■□□□ 1.17
PUF60-212ENST00000528320 CCDC144AA2RUR9 1427 aa22.37■■□□□ 1.17
PUF60-212ENST00000528320 AFF2P51816 1311 aa22.33■■□□□ 1.17
PUF60-212ENST00000528320 NHSL1Q5SYE7 1610 aa22.33■■□□□ 1.17
PUF60-212ENST00000528320 DDX17Q92841 729 aaKnown RBP22.32■■□□□ 1.16
PUF60-212ENST00000528320 ANKRD30BQ9BXX2 1392 aa22.32■■□□□ 1.16
PUF60-212ENST00000528320 PPLO60437 1756 aa22.32■■□□□ 1.16
PUF60-212ENST00000528320 PRAG1Q86YV5 1406 aa22.31■■□□□ 1.16
PUF60-212ENST00000528320 CDK12Q9NYV4 1490 aaPredicted RBP22.31■■□□□ 1.16
PUF60-212ENST00000528320 PNPLA6Q8IY17 1366 aa22.3■■□□□ 1.16
PUF60-212ENST00000528320 C1orf167Q5SNV9 1468 aa22.29■■□□□ 1.16
PUF60-212ENST00000528320 C8orf37Q96NL8 207 aa22.28■■□□□ 1.16
PUF60-212ENST00000528320 PTCH1Q13635 1447 aa22.28■■□□□ 1.16
PUF60-212ENST00000528320 ADGRF5Q8IZF2 1346 aa22.28■■□□□ 1.16
PUF60-212ENST00000528320 NALCNQ8IZF0 1738 aa22.27■■□□□ 1.16
PUF60-212ENST00000528320 QTRT2Q9H974 415 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms