RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 ANKRD30BQ9BXX2 1392 aa19.26■□□□□ 0.67
CNKSR1-211ENST00000528001 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
CNKSR1-211ENST00000528001 MYO5BQ9ULV0 1848 aa19.25■□□□□ 0.67
CNKSR1-211ENST00000528001 FOXD1Q16676 465 aa19.25■□□□□ 0.67
CNKSR1-211ENST00000528001 PLEKHG1Q9ULL1 1385 aa19.24■□□□□ 0.67
CNKSR1-211ENST00000528001 CHGAP10645 457 aaKnown RBP19.24■□□□□ 0.67
CNKSR1-211ENST00000528001 ILDR1Q86SU0 546 aaPredicted RBP19.24■□□□□ 0.67
CNKSR1-211ENST00000528001 SPATA31E1Q6ZUB1 1445 aa19.23■□□□□ 0.67
CNKSR1-211ENST00000528001 NEXMIFQ5QGS0 1516 aa19.21■□□□□ 0.67
CNKSR1-211ENST00000528001 DIP2AQ14689 1571 aa19.19■□□□□ 0.66
CNKSR1-211ENST00000528001 LTBP4Q8N2S1 1624 aa19.18■□□□□ 0.66
CNKSR1-211ENST00000528001 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
CNKSR1-211ENST00000528001 ZNF326Q5BKZ1 582 aaKnown RBP19.18■□□□□ 0.66
CNKSR1-211ENST00000528001 SETBP1Q9Y6X0 1596 aa19.17■□□□□ 0.66
CNKSR1-211ENST00000528001 VGFO15240 615 aaPredicted RBP19.16■□□□□ 0.66
CNKSR1-211ENST00000528001 IQSEC2Q5JU85 1478 aa19.16■□□□□ 0.66
CNKSR1-211ENST00000528001 CPS1P31327 1500 aa19.15■□□□□ 0.66
CNKSR1-211ENST00000528001 TBX22Q9Y458 520 aa19.15■□□□□ 0.66
CNKSR1-211ENST00000528001 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
CNKSR1-211ENST00000528001 PPLO60437 1756 aa19.14■□□□□ 0.65
CNKSR1-211ENST00000528001 STAC3Q96MF2 364 aa19.13■□□□□ 0.65
CNKSR1-211ENST00000528001 ADAMTS13Q76LX8 1427 aa19.13■□□□□ 0.65
CNKSR1-211ENST00000528001 IFT172Q9UG01 1749 aa19.12■□□□□ 0.65
CNKSR1-211ENST00000528001 DHX57Q6P158 1386 aaKnown RBP19.12■□□□□ 0.65
CNKSR1-211ENST00000528001 ZNF335Q9H4Z2 1342 aaPredicted RBP19.12■□□□□ 0.65
CNKSR1-211ENST00000528001 NRXN3Q9Y4C0 1643 aa19.1■□□□□ 0.65
CNKSR1-211ENST00000528001 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
CNKSR1-211ENST00000528001 MYOM2P54296 1465 aa19.09■□□□□ 0.65
CNKSR1-211ENST00000528001 CERKQ8TCT0 537 aa19.09■□□□□ 0.65
CNKSR1-211ENST00000528001 KCNA6P17658 529 aa19.08■□□□□ 0.64
CNKSR1-211ENST00000528001 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.64
CNKSR1-211ENST00000528001 NKTRP30414 1462 aaKnown RBP19.08■□□□□ 0.64
CNKSR1-211ENST00000528001 NRXN1Q9ULB1 1477 aa19.08■□□□□ 0.64
CNKSR1-211ENST00000528001 BCANQ96GW7 911 aa19.07■□□□□ 0.64
CNKSR1-211ENST00000528001 RGL3Q3MIN7 710 aa19.06■□□□□ 0.64
CNKSR1-211ENST00000528001 NUTM2DQ5VT03 806 aaPredicted RBP19.06■□□□□ 0.64
CNKSR1-211ENST00000528001 PIK3C2GO75747 1445 aa19.04■□□□□ 0.64
CNKSR1-211ENST00000528001 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
CNKSR1-211ENST00000528001 CHD2O14647 1828 aaKnown RBP19.04■□□□□ 0.64
CNKSR1-211ENST00000528001 STRCP1A6NGW2 1772 aa19.04■□□□□ 0.64
CNKSR1-211ENST00000528001 PRAG1Q86YV5 1406 aa19.03■□□□□ 0.64
CNKSR1-211ENST00000528001 FBXO41Q8TF61 875 aa19.03■□□□□ 0.64
CNKSR1-211ENST00000528001 LRRC7Q96NW7 1537 aa19.02■□□□□ 0.64
CNKSR1-211ENST00000528001 ALKQ9UM73 1620 aa19.02■□□□□ 0.64
CNKSR1-211ENST00000528001 SETD1AO15047 1707 aaKnown RBP19.02■□□□□ 0.63
CNKSR1-211ENST00000528001 ADGRF5Q8IZF2 1346 aa19.01■□□□□ 0.63
CNKSR1-211ENST00000528001 NCOA3Q9Y6Q9 1424 aa19.01■□□□□ 0.63
CNKSR1-211ENST00000528001 LAMC1P11047 1609 aa19■□□□□ 0.63
CNKSR1-211ENST00000528001 CLSPNQ9HAW4 1339 aa18.99■□□□□ 0.63
CNKSR1-211ENST00000528001 METP08581 1390 aa18.98■□□□□ 0.63
CNKSR1-211ENST00000528001 XRN1Q8IZH2 1706 aaKnown RBP18.98■□□□□ 0.63
CNKSR1-211ENST00000528001 PTPRUQ92729 1446 aa18.97■□□□□ 0.63
CNKSR1-211ENST00000528001 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
CNKSR1-211ENST00000528001 C14orf93Q9H972 538 aaKnown RBP18.96■□□□□ 0.63
CNKSR1-211ENST00000528001 PTCH1Q13635 1447 aa18.95■□□□□ 0.62
CNKSR1-211ENST00000528001 AMOTL2Q9Y2J4 779 aa18.94■□□□□ 0.62
CNKSR1-211ENST00000528001 TECPR2O15040 1411 aa18.93■□□□□ 0.62
CNKSR1-211ENST00000528001 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
CNKSR1-211ENST00000528001 PROSER2Q86WR7 435 aaPredicted RBP18.92■□□□□ 0.62
CNKSR1-211ENST00000528001 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
CNKSR1-211ENST00000528001 XIRP1Q702N8 1843 aaKnown RBP18.9■□□□□ 0.62
CNKSR1-211ENST00000528001 LRPPRCP42704 1394 aaKnown RBP18.9■□□□□ 0.62
CNKSR1-211ENST00000528001 ABCC11Q96J66 1382 aa18.9■□□□□ 0.62
CNKSR1-211ENST00000528001 ASXL1Q8IXJ9 1541 aa18.9■□□□□ 0.62
CNKSR1-211ENST00000528001 SIRT1Q96EB6 747 aa18.89■□□□□ 0.61
CNKSR1-211ENST00000528001 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
CNKSR1-211ENST00000528001 KNDC1Q76NI1 1749 aa18.88■□□□□ 0.61
CNKSR1-211ENST00000528001 KIAA1210Q9ULL0 1709 aa18.88■□□□□ 0.61
CNKSR1-211ENST00000528001 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
CNKSR1-211ENST00000528001 ADGRB1O14514 1584 aa18.87■□□□□ 0.61
CNKSR1-211ENST00000528001 TOM1O60784 492 aa18.87■□□□□ 0.61
CNKSR1-211ENST00000528001 DCCP43146 1447 aa18.87■□□□□ 0.61
CNKSR1-211ENST00000528001 KDM2AQ9Y2K7 1162 aa18.87■□□□□ 0.61
CNKSR1-211ENST00000528001 YTHDC2Q9H6S0 1430 aaKnown RBP18.86■□□□□ 0.61
CNKSR1-211ENST00000528001 MSH6P52701 1360 aa18.86■□□□□ 0.61
CNKSR1-211ENST00000528001 CFAP70Q5T0N1 1121 aa18.86■□□□□ 0.61
CNKSR1-211ENST00000528001 FAM135BQ49AJ0 1406 aa18.85■□□□□ 0.61
CNKSR1-211ENST00000528001 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
CNKSR1-211ENST00000528001 TIMELESSQ9UNS1 1208 aa18.85■□□□□ 0.61
CNKSR1-211ENST00000528001 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
CNKSR1-211ENST00000528001 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
CNKSR1-211ENST00000528001 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
CNKSR1-211ENST00000528001 ROBO2Q9HCK4 1378 aa18.83■□□□□ 0.61
CNKSR1-211ENST00000528001 UBAP1LF5GYI3 381 aa18.83■□□□□ 0.6
CNKSR1-211ENST00000528001 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.6
CNKSR1-211ENST00000528001 TMEM132EQ6IEE7 984 aa18.81■□□□□ 0.6
CNKSR1-211ENST00000528001 CADPS2Q86UW7 1296 aa18.8■□□□□ 0.6
CNKSR1-211ENST00000528001 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.78■□□□□ 0.6
CNKSR1-211ENST00000528001 TRPM1Q7Z4N2 1603 aa18.76■□□□□ 0.59
CNKSR1-211ENST00000528001 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
CNKSR1-211ENST00000528001 RBM33Q96EV2 1170 aaKnown RBP18.76■□□□□ 0.59
CNKSR1-211ENST00000528001 NALCNQ8IZF0 1738 aa18.76■□□□□ 0.59
CNKSR1-211ENST00000528001 ATF3P18847 181 aa18.75■□□□□ 0.59
CNKSR1-211ENST00000528001 STK26Q9P289 416 aa18.75■□□□□ 0.59
CNKSR1-211ENST00000528001 CDC42BPGQ6DT37 1551 aa18.75■□□□□ 0.59
CNKSR1-211ENST00000528001 GPRASP1Q5JY77 1395 aa18.74■□□□□ 0.59
CNKSR1-211ENST00000528001 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
CNKSR1-211ENST00000528001 SLAIN2Q9P270 581 aa18.73■□□□□ 0.59
CNKSR1-211ENST00000528001 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
CNKSR1-211ENST00000528001 ADGRB2O60241 1585 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms