RNA–Protein interactions for RNA: ENST00000527397.1

RAB1B-202, Transcript of RAB1B, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB1B, Length 991 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1B-202ENST00000527397 SLIT1O75093 1534 aa23.28■■□□□ 1.32
RAB1B-202ENST00000527397 UHRF1BP1Q6BDS2 1440 aa23.27■■□□□ 1.32
RAB1B-202ENST00000527397 CHGAP10645 457 aaKnown RBP23.24■■□□□ 1.31
RAB1B-202ENST00000527397 DCAF11Q8TEB1 546 aa23.23■■□□□ 1.31
RAB1B-202ENST00000527397 TMEM2Q9UHN6 1383 aa23.23■■□□□ 1.31
RAB1B-202ENST00000527397 NBPF8Q3BBV2 869 aa23.22■■□□□ 1.31
RAB1B-202ENST00000527397 STAC3Q96MF2 364 aa23.22■■□□□ 1.31
RAB1B-202ENST00000527397 PRAG1Q86YV5 1406 aa23.22■■□□□ 1.31
RAB1B-202ENST00000527397 RIMS2Q9UQ26 1411 aa23.21■■□□□ 1.31
RAB1B-202ENST00000527397 TRPM1Q7Z4N2 1603 aa23.2■■□□□ 1.3
RAB1B-202ENST00000527397 LMTK3Q96Q04 1460 aa23.19■■□□□ 1.3
RAB1B-202ENST00000527397 KIAA1210Q9ULL0 1709 aa23.19■■□□□ 1.3
RAB1B-202ENST00000527397 NRXN3Q9Y4C0 1643 aa23.19■■□□□ 1.3
RAB1B-202ENST00000527397 ADGRF5Q8IZF2 1346 aa23.18■■□□□ 1.3
RAB1B-202ENST00000527397 ZNF326Q5BKZ1 582 aaKnown RBP23.18■■□□□ 1.3
RAB1B-202ENST00000527397 SETD1AO15047 1707 aaKnown RBP23.17■■□□□ 1.3
RAB1B-202ENST00000527397 THEMISQ8N1K5 641 aaPredicted RBP23.17■■□□□ 1.3
RAB1B-202ENST00000527397 STAG3Q9UJ98 1225 aa23.17■■□□□ 1.3
RAB1B-202ENST00000527397 PIK3C2GO75747 1445 aa23.16■■□□□ 1.3
RAB1B-202ENST00000527397 KDM2AQ9Y2K7 1162 aa23.16■■□□□ 1.3
RAB1B-202ENST00000527397 LTKP29376 864 aa23.14■■□□□ 1.29
RAB1B-202ENST00000527397 POLR1AO95602 1720 aaPredicted RBP23.13■■□□□ 1.29
RAB1B-202ENST00000527397 SETBP1Q9Y6X0 1596 aa23.13■■□□□ 1.29
RAB1B-202ENST00000527397 VGFO15240 615 aaPredicted RBP23.12■■□□□ 1.29
RAB1B-202ENST00000527397 IQGAP1P46940 1657 aa23.12■■□□□ 1.29
RAB1B-202ENST00000527397 RALGAPBQ86X10 1494 aa23.11■■□□□ 1.29
RAB1B-202ENST00000527397 NUTM2DQ5VT03 806 aaPredicted RBP23.1■■□□□ 1.29
RAB1B-202ENST00000527397 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
RAB1B-202ENST00000527397 SCAF11Q99590 1463 aaKnown RBP23.1■■□□□ 1.29
RAB1B-202ENST00000527397 LAMC1P11047 1609 aa23.09■■□□□ 1.29
RAB1B-202ENST00000527397 MED14O60244 1454 aa23.09■■□□□ 1.29
RAB1B-202ENST00000527397 STRCQ7RTU9 1775 aa23.09■■□□□ 1.29
RAB1B-202ENST00000527397 PLEKHG1Q9ULL1 1385 aa23.08■■□□□ 1.29
RAB1B-202ENST00000527397 ALKQ9UM73 1620 aa23.08■■□□□ 1.28
RAB1B-202ENST00000527397 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
RAB1B-202ENST00000527397 ASXL1Q8IXJ9 1541 aa23.07■■□□□ 1.28
RAB1B-202ENST00000527397 ADGRB1O14514 1584 aa23.06■■□□□ 1.28
RAB1B-202ENST00000527397 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
RAB1B-202ENST00000527397 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
RAB1B-202ENST00000527397 ADAMTS13Q76LX8 1427 aa23.06■■□□□ 1.28
RAB1B-202ENST00000527397 HDGFP51858 240 aaKnown RBP23.05■■□□□ 1.28
RAB1B-202ENST00000527397 NBPF1Q3BBV0 1214 aa23.03■■□□□ 1.28
RAB1B-202ENST00000527397 CFAP70Q5T0N1 1121 aa23.02■■□□□ 1.28
RAB1B-202ENST00000527397 EID1Q9Y6B2 187 aa23.01■■□□□ 1.27
RAB1B-202ENST00000527397 HSPA2P54652 639 aa23■■□□□ 1.27
RAB1B-202ENST00000527397 ANKLE2Q86XL3 938 aa23■■□□□ 1.27
RAB1B-202ENST00000527397 DIP2AQ14689 1571 aa22.99■■□□□ 1.27
RAB1B-202ENST00000527397 NCKAP5LQ9HCH0 1330 aa22.97■■□□□ 1.27
RAB1B-202ENST00000527397 NPHP4O75161 1426 aaPredicted RBP22.96■■□□□ 1.27
RAB1B-202ENST00000527397 ROCK2O75116 1388 aaKnown RBP22.94■■□□□ 1.26
RAB1B-202ENST00000527397 TBX22Q9Y458 520 aa22.94■■□□□ 1.26
RAB1B-202ENST00000527397 METP08581 1390 aa22.93■■□□□ 1.26
RAB1B-202ENST00000527397 CHD2O14647 1828 aaKnown RBP22.93■■□□□ 1.26
RAB1B-202ENST00000527397 KNDC1Q76NI1 1749 aa22.93■■□□□ 1.26
RAB1B-202ENST00000527397 ARHGEF28Q8N1W1 1705 aaKnown RBP22.92■■□□□ 1.26
RAB1B-202ENST00000527397 TMEM132EQ6IEE7 984 aa22.9■■□□□ 1.26
RAB1B-202ENST00000527397 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
RAB1B-202ENST00000527397 PTPRUQ92729 1446 aa22.9■■□□□ 1.26
RAB1B-202ENST00000527397 XRN1Q8IZH2 1706 aaKnown RBP22.89■■□□□ 1.26
RAB1B-202ENST00000527397 SLC26A8Q96RN1 970 aa22.88■■□□□ 1.25
RAB1B-202ENST00000527397 CARD11Q9BXL7 1154 aa22.88■■□□□ 1.25
RAB1B-202ENST00000527397 YTHDC2Q9H6S0 1430 aaKnown RBP22.88■■□□□ 1.25
RAB1B-202ENST00000527397 TECPR2O15040 1411 aa22.87■■□□□ 1.25
RAB1B-202ENST00000527397 DLC1Q96QB1 1528 aa22.87■■□□□ 1.25
RAB1B-202ENST00000527397 LRPPRCP42704 1394 aaKnown RBP22.86■■□□□ 1.25
RAB1B-202ENST00000527397 PIK3R4Q99570 1358 aa22.86■■□□□ 1.25
RAB1B-202ENST00000527397 CPS1P31327 1500 aa22.85■■□□□ 1.25
RAB1B-202ENST00000527397 ABCC11Q96J66 1382 aa22.85■■□□□ 1.25
RAB1B-202ENST00000527397 USP47Q96K76 1375 aa22.85■■□□□ 1.25
RAB1B-202ENST00000527397 NWD1Q149M9 1564 aa22.84■■□□□ 1.25
RAB1B-202ENST00000527397 STRCP1A6NGW2 1772 aa22.84■■□□□ 1.25
RAB1B-202ENST00000527397 HSPA5P11021 654 aaKnown RBP22.8■■□□□ 1.24
RAB1B-202ENST00000527397 BCANQ96GW7 911 aa22.8■■□□□ 1.24
RAB1B-202ENST00000527397 EIF4G2P78344 907 aaKnown RBP eCLIP22.79■■□□□ 1.24
RAB1B-202ENST00000527397 QRICH2Q9H0J4 1663 aa22.78■■□□□ 1.24
RAB1B-202ENST00000527397 SIRT1Q96EB6 747 aa22.78■■□□□ 1.24
RAB1B-202ENST00000527397 TRAK1Q9UPV9 953 aa22.77■■□□□ 1.24
RAB1B-202ENST00000527397 PTCH1Q13635 1447 aa22.76■■□□□ 1.23
RAB1B-202ENST00000527397 FAM135BQ49AJ0 1406 aa22.76■■□□□ 1.23
RAB1B-202ENST00000527397 ST20-MTHFSA0A0A6YYL1 179 aa22.76■■□□□ 1.23
RAB1B-202ENST00000527397 TESK2Q96S53 571 aa22.76■■□□□ 1.23
RAB1B-202ENST00000527397 ROBO2Q9HCK4 1378 aa22.76■■□□□ 1.23
RAB1B-202ENST00000527397 AMOTL2Q9Y2J4 779 aa22.74■■□□□ 1.23
RAB1B-202ENST00000527397 SBNO2Q9Y2G9 1366 aa22.74■■□□□ 1.23
RAB1B-202ENST00000527397 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.74■■□□□ 1.23
RAB1B-202ENST00000527397 STK26Q9P289 416 aa22.73■■□□□ 1.23
RAB1B-202ENST00000527397 PLEKHH1Q9ULM0 1364 aa22.73■■□□□ 1.23
RAB1B-202ENST00000527397 KCNA6P17658 529 aa22.72■■□□□ 1.23
RAB1B-202ENST00000527397 HIRIP3Q9BW71 556 aaPredicted RBP22.72■■□□□ 1.23
RAB1B-202ENST00000527397 EIF3AQ14152 1382 aaKnown RBP22.72■■□□□ 1.23
RAB1B-202ENST00000527397 XIRP1Q702N8 1843 aaKnown RBP22.7■■□□□ 1.22
RAB1B-202ENST00000527397 NKTRP30414 1462 aaKnown RBP22.69■■□□□ 1.22
RAB1B-202ENST00000527397 CENPJQ9HC77 1338 aaPredicted RBP22.69■■□□□ 1.22
RAB1B-202ENST00000527397 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
RAB1B-202ENST00000527397 C11orf95C9JLR9 678 aaPredicted RBP22.68■■□□□ 1.22
RAB1B-202ENST00000527397 WAPLQ7Z5K2 1190 aa22.68■■□□□ 1.22
RAB1B-202ENST00000527397 PRAM1Q96QH2 718 aa22.68■■□□□ 1.22
RAB1B-202ENST00000527397 ADGRB2O60241 1585 aa22.67■■□□□ 1.22
RAB1B-202ENST00000527397 TULP4Q9NRJ4 1543 aa22.66■■□□□ 1.22
RAB1B-202ENST00000527397 NALCNQ8IZF0 1738 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms