RNA–Protein interactions for RNA: ENST00000526994.6

RAB3IP-208, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-208ENST00000526994 PHOX2BQ99453 314 aa11.26□□□□□ -0.61
RAB3IP-208ENST00000526994 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
RAB3IP-208ENST00000526994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
RAB3IP-208ENST00000526994 TMEM134Q9H6X4 195 aa11.25□□□□□ -0.61
RAB3IP-208ENST00000526994 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
RAB3IP-208ENST00000526994 TSR3Q9UJK0 312 aaKnown RBP11.23□□□□□ -0.61
RAB3IP-208ENST00000526994 PPP4CP60510 307 aa11.21□□□□□ -0.61
RAB3IP-208ENST00000526994 SLF2Q8IX21 1173 aa11.21□□□□□ -0.61
RAB3IP-208ENST00000526994 SLC4A3P48751 1232 aa11.18□□□□□ -0.62
RAB3IP-208ENST00000526994 MDM2Q00987 491 aaPredicted RBP11.16□□□□□ -0.62
RAB3IP-208ENST00000526994 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
RAB3IP-208ENST00000526994 DAXXQ9UER7 740 aaPredicted RBP11.15□□□□□ -0.62
RAB3IP-208ENST00000526994 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
RAB3IP-208ENST00000526994 SLC10A3P09131 477 aa11.13□□□□□ -0.63
RAB3IP-208ENST00000526994 APLP1P51693 650 aa11.13□□□□□ -0.63
RAB3IP-208ENST00000526994 NYAP1Q6ZVC0 841 aa11.12□□□□□ -0.63
RAB3IP-208ENST00000526994 RDH13Q8NBN7 331 aa11.12□□□□□ -0.63
RAB3IP-208ENST00000526994 AK7Q96M32 723 aa11.12□□□□□ -0.63
RAB3IP-208ENST00000526994 CFHP08603 1231 aa11.11□□□□□ -0.63
RAB3IP-208ENST00000526994 NECTIN2Q92692 538 aa11.11□□□□□ -0.63
RAB3IP-208ENST00000526994 TRIM66O15016 1216 aa11.1□□□□□ -0.63
RAB3IP-208ENST00000526994 TTLL12Q14166 644 aaPredicted RBP11.09□□□□□ -0.63
RAB3IP-208ENST00000526994 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
RAB3IP-208ENST00000526994 GPCPD1Q9NPB8 672 aa11.09□□□□□ -0.63
RAB3IP-208ENST00000526994 CLCN1P35523 988 aa11.08□□□□□ -0.64
RAB3IP-208ENST00000526994 REPIN1Q9BWE0 567 aaKnown RBP11.08□□□□□ -0.64
RAB3IP-208ENST00000526994 AMHR2Q16671 573 aa11.07□□□□□ -0.64
RAB3IP-208ENST00000526994 SULF1Q8IWU6 871 aa11.07□□□□□ -0.64
RAB3IP-208ENST00000526994 PLA2G2EQ9NZK7 142 aa11.07□□□□□ -0.64
RAB3IP-208ENST00000526994 KMT5BQ4FZB7 885 aa11.06□□□□□ -0.64
RAB3IP-208ENST00000526994 RSPH4AQ5TD94 716 aa11.06□□□□□ -0.64
RAB3IP-208ENST00000526994 TMUB1Q9BVT8 246 aa11.05□□□□□ -0.64
RAB3IP-208ENST00000526994 PRR14Q9BWN1 585 aa11.04□□□□□ -0.64
RAB3IP-208ENST00000526994 COPS2P61201 443 aa11.03□□□□□ -0.64
RAB3IP-208ENST00000526994 GIGYF2Q6Y7W6 1299 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-208ENST00000526994 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
RAB3IP-208ENST00000526994 MTRQ99707 1265 aa11.03□□□□□ -0.64
RAB3IP-208ENST00000526994 FAM217BQ9NTX9 383 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-208ENST00000526994 ACTN4O43707 911 aaKnown RBP11.02□□□□□ -0.65
RAB3IP-208ENST00000526994 CD46P15529 392 aa11.02□□□□□ -0.65
RAB3IP-208ENST00000526994 PDE4DQ08499 809 aa11.02□□□□□ -0.65
RAB3IP-208ENST00000526994 PCDHB3Q9Y5E6 796 aa11.02□□□□□ -0.65
RAB3IP-208ENST00000526994 ITGBL1O95965 494 aaPredicted RBP11.01□□□□□ -0.65
RAB3IP-208ENST00000526994 TJAP1Q5JTD0 557 aa11.01□□□□□ -0.65
RAB3IP-208ENST00000526994 GCGRP47871 477 aa11□□□□□ -0.65
RAB3IP-208ENST00000526994 BLOC1S3Q6QNY0 202 aa11□□□□□ -0.65
RAB3IP-208ENST00000526994 SSTR3P32745 418 aaPredicted RBP10.99□□□□□ -0.65
RAB3IP-208ENST00000526994 KCNC4Q03721 635 aa10.98□□□□□ -0.65
RAB3IP-208ENST00000526994 FUT2Q10981 343 aa10.98□□□□□ -0.65
RAB3IP-208ENST00000526994 PUS10Q3MIT2 529 aaKnown RBP10.98□□□□□ -0.65
RAB3IP-208ENST00000526994 ZNF516Q92618 1163 aa10.98□□□□□ -0.65
RAB3IP-208ENST00000526994 IL21Q9HBE4 155 aa10.98□□□□□ -0.65
RAB3IP-208ENST00000526994 PRKCSHP14314 528 aaPredicted RBP10.96□□□□□ -0.65
RAB3IP-208ENST00000526994 MS4A1P11836 297 aa10.95□□□□□ -0.66
RAB3IP-208ENST00000526994 TLL1O43897 1013 aa10.93□□□□□ -0.66
RAB3IP-208ENST00000526994 KDM4AO75164 1064 aa10.93□□□□□ -0.66
RAB3IP-208ENST00000526994 ZPR1O75312 459 aa10.92□□□□□ -0.66
RAB3IP-208ENST00000526994 ATP6V1AP38606 617 aa10.92□□□□□ -0.66
RAB3IP-208ENST00000526994 NKX2-3Q8TAU0 364 aa10.92□□□□□ -0.66
RAB3IP-208ENST00000526994 GPBP1L1Q9HC44 474 aaPredicted RBP10.92□□□□□ -0.66
RAB3IP-208ENST00000526994 MORN1Q5T089 497 aa10.91□□□□□ -0.66
RAB3IP-208ENST00000526994 IFFO2Q5TF58 517 aa10.91□□□□□ -0.66
RAB3IP-208ENST00000526994 HLA-CQ95604 372 aa10.91□□□□□ -0.66
RAB3IP-208ENST00000526994 BEGAINQ9BUH8 593 aa10.91□□□□□ -0.66
RAB3IP-208ENST00000526994 NR1I2O75469 434 aa10.9□□□□□ -0.66
RAB3IP-208ENST00000526994 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
RAB3IP-208ENST00000526994 SCUBE3Q8IX30 993 aa10.89□□□□□ -0.67
RAB3IP-208ENST00000526994 HOXA2O43364 376 aa10.88□□□□□ -0.67
RAB3IP-208ENST00000526994 SLC27A5Q9Y2P5 690 aa10.88□□□□□ -0.67
RAB3IP-208ENST00000526994 A0A0G2JS52 829 aa10.87□□□□□ -0.67
RAB3IP-208ENST00000526994 USP46P62068 366 aa10.87□□□□□ -0.67
RAB3IP-208ENST00000526994 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
RAB3IP-208ENST00000526994 GRIPAP1Q4V328 841 aa10.87□□□□□ -0.67
RAB3IP-208ENST00000526994 SPIRE2Q8WWL2 714 aa10.87□□□□□ -0.67
RAB3IP-208ENST00000526994 KDM4CQ9H3R0 1056 aa10.87□□□□□ -0.67
RAB3IP-208ENST00000526994 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
RAB3IP-208ENST00000526994 TBC1D2Q9BYX2 928 aa10.84□□□□□ -0.67
RAB3IP-208ENST00000526994 NDUFV2P19404 249 aa10.83□□□□□ -0.68
RAB3IP-208ENST00000526994 RNF19BQ6ZMZ0 732 aa10.83□□□□□ -0.68
RAB3IP-208ENST00000526994 ADH1BP00325 375 aa10.82□□□□□ -0.68
RAB3IP-208ENST00000526994 SPSB2Q99619 263 aa10.82□□□□□ -0.68
RAB3IP-208ENST00000526994 MOXD2PA6NHM9 499 aa10.81□□□□□ -0.68
RAB3IP-208ENST00000526994 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
RAB3IP-208ENST00000526994 PPP1R18Q6NYC8 613 aa10.81□□□□□ -0.68
RAB3IP-208ENST00000526994 THAP11Q96EK4 314 aa10.81□□□□□ -0.68
RAB3IP-208ENST00000526994 S1PR4O95977 384 aa10.8□□□□□ -0.68
RAB3IP-208ENST00000526994 FAM117AQ9C073 453 aa10.8□□□□□ -0.68
RAB3IP-208ENST00000526994 FDX1P10109 184 aa10.79□□□□□ -0.68
RAB3IP-208ENST00000526994 BRPF1P55201 1214 aaPredicted RBP10.79□□□□□ -0.68
RAB3IP-208ENST00000526994 Q3C1V9 767 aa10.78□□□□□ -0.68
RAB3IP-208ENST00000526994 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
RAB3IP-208ENST00000526994 SYMPKQ92797 1274 aaKnown RBP10.78□□□□□ -0.68
RAB3IP-208ENST00000526994 SLC6A16Q9GZN6 736 aa10.78□□□□□ -0.68
RAB3IP-208ENST00000526994 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
RAB3IP-208ENST00000526994 PRDM9Q9NQV7 894 aa10.77□□□□□ -0.69
RAB3IP-208ENST00000526994 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.77□□□□□ -0.69
RAB3IP-208ENST00000526994 GGCXP38435 758 aa10.76□□□□□ -0.69
RAB3IP-208ENST00000526994 DIXDC1Q155Q3 683 aa10.76□□□□□ -0.69
RAB3IP-208ENST00000526994 MYSM1Q5VVJ2 828 aa10.76□□□□□ -0.69
RAB3IP-208ENST00000526994 RSBN1LQ6PCB5 846 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms