RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ADGRL2O95490 1459 aa25.94■■□□□ 1.74
CCS-204ENST00000526066 NOS1P29475 1434 aa25.94■■□□□ 1.74
CCS-204ENST00000526066 ROCK1Q13464 1354 aa25.94■■□□□ 1.74
CCS-204ENST00000526066 TET3O43151 1660 aa25.93■■□□□ 1.74
CCS-204ENST00000526066 MSH6P52701 1360 aa25.93■■□□□ 1.74
CCS-204ENST00000526066 RPRD2Q5VT52 1461 aaKnown RBP25.91■■□□□ 1.74
CCS-204ENST00000526066 PPP1R15AO75807 674 aaPredicted RBP25.91■■□□□ 1.74
CCS-204ENST00000526066 HDGFP51858 240 aaKnown RBP25.91■■□□□ 1.74
CCS-204ENST00000526066 RGS17Q9UGC6 210 aaPredicted RBP25.91■■□□□ 1.74
CCS-204ENST00000526066 NWD1Q149M9 1564 aa25.9■■□□□ 1.74
CCS-204ENST00000526066 RBM33Q96EV2 1170 aaKnown RBP25.88■■□□□ 1.73
CCS-204ENST00000526066 ANKRD50Q9ULJ7 1429 aa25.87■■□□□ 1.73
CCS-204ENST00000526066 GCC2Q8IWJ2 1684 aa25.84■■□□□ 1.73
CCS-204ENST00000526066 PHLPP1O60346 1717 aa25.83■■□□□ 1.72
CCS-204ENST00000526066 PLEKHG1Q9ULL1 1385 aa25.82■■□□□ 1.72
CCS-204ENST00000526066 MYO5BQ9ULV0 1848 aa25.82■■□□□ 1.72
CCS-204ENST00000526066 HFM1A2PYH4 1435 aa25.81■■□□□ 1.72
CCS-204ENST00000526066 RIMS2Q9UQ26 1411 aa25.81■■□□□ 1.72
CCS-204ENST00000526066 SLAIN2Q9P270 581 aa25.81■■□□□ 1.72
CCS-204ENST00000526066 CHD2O14647 1828 aaKnown RBP25.8■■□□□ 1.72
CCS-204ENST00000526066 C14orf37Q86TY3 774 aa25.8■■□□□ 1.72
CCS-204ENST00000526066 ZFYVE9O95405 1425 aa25.8■■□□□ 1.72
CCS-204ENST00000526066 CHGAP10645 457 aaKnown RBP25.79■■□□□ 1.72
CCS-204ENST00000526066 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.79■■□□□ 1.72
CCS-204ENST00000526066 NAIPQ13075 1403 aa25.78■■□□□ 1.72
CCS-204ENST00000526066 JCADQ9P266 1359 aa25.77■■□□□ 1.72
CCS-204ENST00000526066 TMEM131LA2VDJ0 1609 aa25.77■■□□□ 1.72
CCS-204ENST00000526066 POTEAQ6S8J7 498 aa25.76■■□□□ 1.71
CCS-204ENST00000526066 PCGF6Q9BYE7 350 aa25.75■■□□□ 1.71
CCS-204ENST00000526066 UNC13BO14795 1591 aa25.74■■□□□ 1.71
CCS-204ENST00000526066 TBX22Q9Y458 520 aa25.73■■□□□ 1.71
CCS-204ENST00000526066 NCOA3Q9Y6Q9 1424 aa25.72■■□□□ 1.71
CCS-204ENST00000526066 DIP2AQ14689 1571 aa25.71■■□□□ 1.71
CCS-204ENST00000526066 SETD5Q9C0A6 1442 aa25.71■■□□□ 1.71
CCS-204ENST00000526066 E9PCH4 1651 aa25.68■■□□□ 1.7
CCS-204ENST00000526066 ATF3P18847 181 aa25.68■■□□□ 1.7
CCS-204ENST00000526066 MEX3CQ5U5Q3 659 aaKnown RBP25.68■■□□□ 1.7
CCS-204ENST00000526066 CADPS2Q86UW7 1296 aa25.68■■□□□ 1.7
CCS-204ENST00000526066 COL16A1Q07092 1604 aaPredicted RBP25.66■■□□□ 1.7
CCS-204ENST00000526066 PIK3R4Q99570 1358 aa25.66■■□□□ 1.7
CCS-204ENST00000526066 SPATA31A6Q5VVP1 1343 aa25.65■■□□□ 1.7
CCS-204ENST00000526066 NUTM2DQ5VT03 806 aaPredicted RBP25.65■■□□□ 1.7
CCS-204ENST00000526066 C19orf44Q9H6X5 657 aa25.65■■□□□ 1.7
CCS-204ENST00000526066 IQGAP3Q86VI3 1631 aa25.65■■□□□ 1.7
CCS-204ENST00000526066 TRPM2O94759 1503 aa25.64■■□□□ 1.7
CCS-204ENST00000526066 HRCP23327 699 aa25.64■■□□□ 1.7
CCS-204ENST00000526066 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.63■■□□□ 1.69
CCS-204ENST00000526066 SETD1AO15047 1707 aaKnown RBP25.63■■□□□ 1.69
CCS-204ENST00000526066 ACIN1Q9UKV3 1341 aaKnown RBP25.63■■□□□ 1.69
CCS-204ENST00000526066 RAB3GAP2Q9H2M9 1393 aa25.62■■□□□ 1.69
CCS-204ENST00000526066 ADAMTS13Q76LX8 1427 aa25.62■■□□□ 1.69
CCS-204ENST00000526066 ZNF772Q68DY9 489 aaPredicted RBP25.6■■□□□ 1.69
CCS-204ENST00000526066 AHDC1Q5TGY3 1603 aaPredicted RBP25.59■■□□□ 1.69
CCS-204ENST00000526066 NUP155O75694 1391 aa25.59■■□□□ 1.69
CCS-204ENST00000526066 SHPRHQ149N8 1683 aa25.58■■□□□ 1.68
CCS-204ENST00000526066 AMOTL2Q9Y2J4 779 aa25.56■■□□□ 1.68
CCS-204ENST00000526066 LRP6O75581 1613 aa25.55■■□□□ 1.68
CCS-204ENST00000526066 DCCP43146 1447 aa25.53■■□□□ 1.68
CCS-204ENST00000526066 ZNF326Q5BKZ1 582 aaKnown RBP25.51■■□□□ 1.67
CCS-204ENST00000526066 SPHKAPQ2M3C7 1700 aa25.5■■□□□ 1.67
CCS-204ENST00000526066 BRINP3Q76B58 766 aa25.49■■□□□ 1.67
CCS-204ENST00000526066 TRIM52Q96A61 297 aa25.49■■□□□ 1.67
CCS-204ENST00000526066 NUTM2BA6NNL0 878 aaPredicted RBP25.48■■□□□ 1.67
CCS-204ENST00000526066 NUTM2EB1AL46 878 aaPredicted RBP25.48■■□□□ 1.67
CCS-204ENST00000526066 NUTM2AQ8IVF1 878 aaPredicted RBP25.48■■□□□ 1.67
CCS-204ENST00000526066 SETBP1Q9Y6X0 1596 aa25.48■■□□□ 1.67
CCS-204ENST00000526066 PTPRUQ92729 1446 aa25.47■■□□□ 1.67
CCS-204ENST00000526066 XRN1Q8IZH2 1706 aaKnown RBP25.47■■□□□ 1.67
CCS-204ENST00000526066 ASXL1Q8IXJ9 1541 aa25.46■■□□□ 1.67
CCS-204ENST00000526066 RXRBP28702 533 aa25.45■■□□□ 1.66
CCS-204ENST00000526066 NRXN3Q9Y4C0 1643 aa25.44■■□□□ 1.66
CCS-204ENST00000526066 UPF1Q92900 1129 aaKnown RBP eCLIP25.41■■□□□ 1.66
CCS-204ENST00000526066 MST1RQ04912 1400 aa25.4■■□□□ 1.66
CCS-204ENST00000526066 LRRC59Q96AG4 307 aaKnown RBP25.4■■□□□ 1.66
CCS-204ENST00000526066 NHSL1Q5SYE7 1610 aa25.4■■□□□ 1.66
CCS-204ENST00000526066 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
CCS-204ENST00000526066 CDK12Q9NYV4 1490 aaPredicted RBP25.37■■□□□ 1.65
CCS-204ENST00000526066 METP08581 1390 aa25.37■■□□□ 1.65
CCS-204ENST00000526066 AFF2P51816 1311 aa25.37■■□□□ 1.65
CCS-204ENST00000526066 KIF1BO60333 1816 aa25.35■■□□□ 1.65
CCS-204ENST00000526066 MPHOSPH9Q99550 1183 aa25.35■■□□□ 1.65
CCS-204ENST00000526066 SLC4A1APQ9BWU0 796 aaKnown RBP25.34■■□□□ 1.65
CCS-204ENST00000526066 CLTCL1P53675 1640 aa25.34■■□□□ 1.65
CCS-204ENST00000526066 NALCNQ8IZF0 1738 aa25.33■■□□□ 1.65
CCS-204ENST00000526066 NEXMIFQ5QGS0 1516 aa25.32■■□□□ 1.64
CCS-204ENST00000526066 C8orf37Q96NL8 207 aa25.32■■□□□ 1.64
CCS-204ENST00000526066 DHX57Q6P158 1386 aaKnown RBP25.3■■□□□ 1.64
CCS-204ENST00000526066 PNPLA6Q8IY17 1366 aa25.29■■□□□ 1.64
CCS-204ENST00000526066 VGFO15240 615 aaPredicted RBP25.26■■□□□ 1.63
CCS-204ENST00000526066 RBM6P78332 1123 aaKnown RBP25.26■■□□□ 1.63
CCS-204ENST00000526066 DDX17Q92841 729 aaKnown RBP25.26■■□□□ 1.63
CCS-204ENST00000526066 NGLY1Q96IV0 654 aa25.25■■□□□ 1.63
CCS-204ENST00000526066 QTRT2Q9H974 415 aaKnown RBP25.25■■□□□ 1.63
CCS-204ENST00000526066 PTCH1Q13635 1447 aa25.25■■□□□ 1.63
CCS-204ENST00000526066 C1orf167Q5SNV9 1468 aa25.24■■□□□ 1.63
CCS-204ENST00000526066 ADAMTS2O95450 1211 aa25.23■■□□□ 1.63
CCS-204ENST00000526066 RGS12O14924 1447 aa25.21■■□□□ 1.63
CCS-204ENST00000526066 LAMC1P11047 1609 aa25.19■■□□□ 1.62
CCS-204ENST00000526066 RPGRIP1LQ68CZ1 1315 aa25.17■■□□□ 1.62
CCS-204ENST00000526066 ROBO2Q9HCK4 1378 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms