RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 KRI1Q8N9T8 703 aaKnown RBP13.32□□□□□ -0.28
CTNND1-211ENST00000525821 SWT1Q5T5J6 900 aaKnown RBP13.31□□□□□ -0.28
CTNND1-211ENST00000525821 NACADO15069 1562 aa13.3□□□□□ -0.28
CTNND1-211ENST00000525821 TMEM134Q9H6X4 195 aa13.3□□□□□ -0.28
CTNND1-211ENST00000525821 CCDC102AQ96A19 550 aa13.28□□□□□ -0.28
CTNND1-211ENST00000525821 TSR3Q9UJK0 312 aaKnown RBP13.28□□□□□ -0.28
CTNND1-211ENST00000525821 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
CTNND1-211ENST00000525821 PHOX2BQ99453 314 aa13.27□□□□□ -0.29
CTNND1-211ENST00000525821 SLC4A3P48751 1232 aa13.26□□□□□ -0.29
CTNND1-211ENST00000525821 SLF2Q8IX21 1173 aa13.26□□□□□ -0.29
CTNND1-211ENST00000525821 WBP1LQ9NX94 342 aa13.26□□□□□ -0.29
CTNND1-211ENST00000525821 PPP4CP60510 307 aa13.25□□□□□ -0.29
CTNND1-211ENST00000525821 RNF40O75150 1001 aa13.24□□□□□ -0.29
CTNND1-211ENST00000525821 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
CTNND1-211ENST00000525821 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
CTNND1-211ENST00000525821 NYAP1Q6ZVC0 841 aa13.21□□□□□ -0.29
CTNND1-211ENST00000525821 NECTIN2Q92692 538 aa13.2□□□□□ -0.3
CTNND1-211ENST00000525821 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
CTNND1-211ENST00000525821 AK7Q96M32 723 aa13.16□□□□□ -0.3
CTNND1-211ENST00000525821 MDM2Q00987 491 aaPredicted RBP13.15□□□□□ -0.3
CTNND1-211ENST00000525821 RSPH4AQ5TD94 716 aa13.15□□□□□ -0.3
CTNND1-211ENST00000525821 SLC24A3Q9HC58 644 aa13.15□□□□□ -0.3
CTNND1-211ENST00000525821 SLC10A3P09131 477 aa13.14□□□□□ -0.31
CTNND1-211ENST00000525821 CECR2Q9BXF3 1484 aa13.12□□□□□ -0.31
CTNND1-211ENST00000525821 TRIM66O15016 1216 aa13.12□□□□□ -0.31
CTNND1-211ENST00000525821 APLP1P51693 650 aa13.12□□□□□ -0.31
CTNND1-211ENST00000525821 SULF1Q8IWU6 871 aa13.12□□□□□ -0.31
CTNND1-211ENST00000525821 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
CTNND1-211ENST00000525821 CLCN1P35523 988 aa13.11□□□□□ -0.31
CTNND1-211ENST00000525821 AMHR2Q16671 573 aa13.1□□□□□ -0.31
CTNND1-211ENST00000525821 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
CTNND1-211ENST00000525821 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
CTNND1-211ENST00000525821 RDH13Q8NBN7 331 aa13.09□□□□□ -0.31
CTNND1-211ENST00000525821 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
CTNND1-211ENST00000525821 PRR14Q9BWN1 585 aa13.09□□□□□ -0.31
CTNND1-211ENST00000525821 CFHP08603 1231 aa13.08□□□□□ -0.32
CTNND1-211ENST00000525821 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
CTNND1-211ENST00000525821 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
CTNND1-211ENST00000525821 REPIN1Q9BWE0 567 aaKnown RBP13.05□□□□□ -0.32
CTNND1-211ENST00000525821 PLA2G2EQ9NZK7 142 aa13.05□□□□□ -0.32
CTNND1-211ENST00000525821 TPRNQ4KMQ1 711 aa13.04□□□□□ -0.32
CTNND1-211ENST00000525821 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
CTNND1-211ENST00000525821 ACTN4O43707 911 aaKnown RBP13.03□□□□□ -0.32
CTNND1-211ENST00000525821 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.33
CTNND1-211ENST00000525821 CD46P15529 392 aa13.02□□□□□ -0.33
CTNND1-211ENST00000525821 PDE4DQ08499 809 aa13.02□□□□□ -0.33
CTNND1-211ENST00000525821 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.33
CTNND1-211ENST00000525821 GCGRP47871 477 aa13.01□□□□□ -0.33
CTNND1-211ENST00000525821 PCDHB3Q9Y5E6 796 aa13.01□□□□□ -0.33
CTNND1-211ENST00000525821 SSTR3P32745 418 aaPredicted RBP13□□□□□ -0.33
CTNND1-211ENST00000525821 TJAP1Q5JTD0 557 aa13□□□□□ -0.33
CTNND1-211ENST00000525821 PARP9Q8IXQ6 854 aa13□□□□□ -0.33
CTNND1-211ENST00000525821 MTRQ99707 1265 aa13□□□□□ -0.33
CTNND1-211ENST00000525821 GIGYF2Q6Y7W6 1299 aaKnown RBP12.99□□□□□ -0.33
CTNND1-211ENST00000525821 IL21Q9HBE4 155 aa12.99□□□□□ -0.33
CTNND1-211ENST00000525821 KCNC4Q03721 635 aa12.98□□□□□ -0.33
CTNND1-211ENST00000525821 COPS2P61201 443 aa12.97□□□□□ -0.33
CTNND1-211ENST00000525821 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
CTNND1-211ENST00000525821 BLOC1S3Q6QNY0 202 aa12.95□□□□□ -0.34
CTNND1-211ENST00000525821 FUT2Q10981 343 aa12.94□□□□□ -0.34
CTNND1-211ENST00000525821 ZNF516Q92618 1163 aa12.94□□□□□ -0.34
CTNND1-211ENST00000525821 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
CTNND1-211ENST00000525821 KDM4AO75164 1064 aa12.92□□□□□ -0.34
CTNND1-211ENST00000525821 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
CTNND1-211ENST00000525821 PUS10Q3MIT2 529 aaKnown RBP12.92□□□□□ -0.34
CTNND1-211ENST00000525821 ZPR1O75312 459 aa12.91□□□□□ -0.34
CTNND1-211ENST00000525821 NR1I2O75469 434 aa12.9□□□□□ -0.34
CTNND1-211ENST00000525821 MS4A1P11836 297 aa12.9□□□□□ -0.34
CTNND1-211ENST00000525821 GRIPAP1Q4V328 841 aa12.9□□□□□ -0.34
CTNND1-211ENST00000525821 MORN1Q5T089 497 aa12.9□□□□□ -0.34
CTNND1-211ENST00000525821 USP46P62068 366 aa12.89□□□□□ -0.35
CTNND1-211ENST00000525821 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
CTNND1-211ENST00000525821 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
CTNND1-211ENST00000525821 SCUBE3Q8IX30 993 aa12.88□□□□□ -0.35
CTNND1-211ENST00000525821 BEGAINQ9BUH8 593 aa12.88□□□□□ -0.35
CTNND1-211ENST00000525821 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
CTNND1-211ENST00000525821 PRKCSHP14314 528 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-211ENST00000525821 NKX2-3Q8TAU0 364 aa12.85□□□□□ -0.35
CTNND1-211ENST00000525821 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
CTNND1-211ENST00000525821 SLC27A5Q9Y2P5 690 aa12.84□□□□□ -0.35
CTNND1-211ENST00000525821 A0A0G2JS52 829 aa12.83□□□□□ -0.36
CTNND1-211ENST00000525821 HOXA2O43364 376 aa12.83□□□□□ -0.36
CTNND1-211ENST00000525821 SPIRE2Q8WWL2 714 aa12.83□□□□□ -0.36
CTNND1-211ENST00000525821 KDM4CQ9H3R0 1056 aa12.82□□□□□ -0.36
CTNND1-211ENST00000525821 TLL1O43897 1013 aa12.81□□□□□ -0.36
CTNND1-211ENST00000525821 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
CTNND1-211ENST00000525821 HLA-CQ95604 372 aa12.79□□□□□ -0.36
CTNND1-211ENST00000525821 TBC1D2Q9BYX2 928 aa12.79□□□□□ -0.36
CTNND1-211ENST00000525821 SALL2Q9Y467 1007 aaPredicted RBP12.79□□□□□ -0.36
CTNND1-211ENST00000525821 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
CTNND1-211ENST00000525821 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
CTNND1-211ENST00000525821 ADH1BP00325 375 aa12.78□□□□□ -0.36
CTNND1-211ENST00000525821 THAP11Q96EK4 314 aa12.78□□□□□ -0.36
CTNND1-211ENST00000525821 SPSB2Q99619 263 aa12.78□□□□□ -0.36
CTNND1-211ENST00000525821 Q3C1V9 767 aa12.77□□□□□ -0.37
CTNND1-211ENST00000525821 BRICD5Q6PL45 260 aa12.77□□□□□ -0.37
CTNND1-211ENST00000525821 MOXD2PA6NHM9 499 aa12.76□□□□□ -0.37
CTNND1-211ENST00000525821 GUCA2AQ02747 115 aa12.76□□□□□ -0.37
CTNND1-211ENST00000525821 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
CTNND1-211ENST00000525821 NDUFV2P19404 249 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms