RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 KIAA1210Q9ULL0 1709 aa12.35□□□□□ -0.43
PABPC4-220ENST00000525669 NBPF1Q3BBV0 1214 aa12.35□□□□□ -0.43
PABPC4-220ENST00000525669 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
PABPC4-220ENST00000525669 IQGAP1P46940 1657 aa12.35□□□□□ -0.43
PABPC4-220ENST00000525669 MYOM2P54296 1465 aa12.34□□□□□ -0.43
PABPC4-220ENST00000525669 USP47Q96K76 1375 aa12.34□□□□□ -0.43
PABPC4-220ENST00000525669 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
PABPC4-220ENST00000525669 CARD11Q9BXL7 1154 aa12.34□□□□□ -0.43
PABPC4-220ENST00000525669 ADGRF5Q8IZF2 1346 aa12.34□□□□□ -0.43
PABPC4-220ENST00000525669 CEBPAP49715 358 aaPredicted RBP12.32□□□□□ -0.44
PABPC4-220ENST00000525669 UBR1Q8IWV7 1749 aa12.31□□□□□ -0.44
PABPC4-220ENST00000525669 DDX10Q13206 875 aaKnown RBP12.31□□□□□ -0.44
PABPC4-220ENST00000525669 SLC52A1Q9NWF4 448 aa12.31□□□□□ -0.44
PABPC4-220ENST00000525669 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
PABPC4-220ENST00000525669 NRXN1Q9ULB1 1477 aa12.3□□□□□ -0.44
PABPC4-220ENST00000525669 C11orf95C9JLR9 678 aaPredicted RBP12.3□□□□□ -0.44
PABPC4-220ENST00000525669 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
PABPC4-220ENST00000525669 GPRASP1Q5JY77 1395 aa12.29□□□□□ -0.44
PABPC4-220ENST00000525669 TNRQ92752 1358 aa12.29□□□□□ -0.44
PABPC4-220ENST00000525669 A2ML1A8K2U0 1454 aa12.28□□□□□ -0.44
PABPC4-220ENST00000525669 CFAP70Q5T0N1 1121 aa12.28□□□□□ -0.44
PABPC4-220ENST00000525669 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
PABPC4-220ENST00000525669 RPGRIP1LQ68CZ1 1315 aa12.28□□□□□ -0.44
PABPC4-220ENST00000525669 MYO3AQ8NEV4 1616 aa12.27□□□□□ -0.44
PABPC4-220ENST00000525669 ST20-MTHFSA0A0A6YYL1 179 aa12.27□□□□□ -0.45
PABPC4-220ENST00000525669 STAC3Q96MF2 364 aa12.27□□□□□ -0.45
PABPC4-220ENST00000525669 PIK3C2GO75747 1445 aa12.27□□□□□ -0.45
PABPC4-220ENST00000525669 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
PABPC4-220ENST00000525669 MIER1Q8N108 512 aa12.26□□□□□ -0.45
PABPC4-220ENST00000525669 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
PABPC4-220ENST00000525669 POLR3GLQ9BT43 218 aa12.25□□□□□ -0.45
PABPC4-220ENST00000525669 CCDC7Q96M83 1385 aa12.25□□□□□ -0.45
PABPC4-220ENST00000525669 SETBP1Q9Y6X0 1596 aa12.25□□□□□ -0.45
PABPC4-220ENST00000525669 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
PABPC4-220ENST00000525669 RIMS2Q9UQ26 1411 aa12.24□□□□□ -0.45
PABPC4-220ENST00000525669 SCAF11Q99590 1463 aaKnown RBP12.23□□□□□ -0.45
PABPC4-220ENST00000525669 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
PABPC4-220ENST00000525669 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
PABPC4-220ENST00000525669 ARHGEF28Q8N1W1 1705 aaKnown RBP12.23□□□□□ -0.45
PABPC4-220ENST00000525669 QRICH2Q9H0J4 1663 aa12.22□□□□□ -0.45
PABPC4-220ENST00000525669 ADGRB1O14514 1584 aa12.22□□□□□ -0.45
PABPC4-220ENST00000525669 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
PABPC4-220ENST00000525669 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
PABPC4-220ENST00000525669 ALKQ9UM73 1620 aa12.22□□□□□ -0.45
PABPC4-220ENST00000525669 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
PABPC4-220ENST00000525669 ASXL1Q8IXJ9 1541 aa12.21□□□□□ -0.45
PABPC4-220ENST00000525669 ZFYVE9O95405 1425 aa12.21□□□□□ -0.45
PABPC4-220ENST00000525669 NLRP1Q9C000 1473 aa12.21□□□□□ -0.46
PABPC4-220ENST00000525669 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
PABPC4-220ENST00000525669 CEP170BQ9Y4F5 1589 aaPredicted RBP12.18□□□□□ -0.46
PABPC4-220ENST00000525669 TESK2Q96S53 571 aa12.18□□□□□ -0.46
PABPC4-220ENST00000525669 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
PABPC4-220ENST00000525669 ZNF142P52746 1687 aaPredicted RBP12.18□□□□□ -0.46
PABPC4-220ENST00000525669 PTPRMP28827 1452 aa12.17□□□□□ -0.46
PABPC4-220ENST00000525669 EIF3AQ14152 1382 aaKnown RBP12.17□□□□□ -0.46
PABPC4-220ENST00000525669 TMEM2Q9UHN6 1383 aa12.16□□□□□ -0.46
PABPC4-220ENST00000525669 MYOM1P52179 1685 aa12.16□□□□□ -0.46
PABPC4-220ENST00000525669 STK26Q9P289 416 aa12.15□□□□□ -0.46
PABPC4-220ENST00000525669 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
PABPC4-220ENST00000525669 BCANQ96GW7 911 aa12.14□□□□□ -0.47
PABPC4-220ENST00000525669 SLIT1O75093 1534 aa12.14□□□□□ -0.47
PABPC4-220ENST00000525669 LTKP29376 864 aa12.13□□□□□ -0.47
PABPC4-220ENST00000525669 TMF1P82094 1093 aa12.13□□□□□ -0.47
PABPC4-220ENST00000525669 YTHDC2Q9H6S0 1430 aaKnown RBP12.12□□□□□ -0.47
PABPC4-220ENST00000525669 ARHGAP23Q9P227 1491 aa12.12□□□□□ -0.47
PABPC4-220ENST00000525669 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
PABPC4-220ENST00000525669 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
PABPC4-220ENST00000525669 ANP32CO43423 234 aa12.11□□□□□ -0.47
PABPC4-220ENST00000525669 HDGFP51858 240 aaKnown RBP12.11□□□□□ -0.47
PABPC4-220ENST00000525669 CNGB1Q14028 1251 aaPredicted RBP12.11□□□□□ -0.47
PABPC4-220ENST00000525669 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
PABPC4-220ENST00000525669 TXNDC2Q86VQ3 553 aa12.11□□□□□ -0.47
PABPC4-220ENST00000525669 METP08581 1390 aa12.1□□□□□ -0.47
PABPC4-220ENST00000525669 PLEKHG1Q9ULL1 1385 aa12.09□□□□□ -0.47
PABPC4-220ENST00000525669 THEMISQ8N1K5 641 aaPredicted RBP12.09□□□□□ -0.47
PABPC4-220ENST00000525669 TULP4Q9NRJ4 1543 aa12.09□□□□□ -0.47
PABPC4-220ENST00000525669 ADAMTS13Q76LX8 1427 aa12.09□□□□□ -0.47
PABPC4-220ENST00000525669 SETD1BQ9UPS6 1966 aaKnown RBP12.09□□□□□ -0.47
PABPC4-220ENST00000525669 EID1Q9Y6B2 187 aa12.08□□□□□ -0.48
PABPC4-220ENST00000525669 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
PABPC4-220ENST00000525669 SLC26A8Q96RN1 970 aa12.07□□□□□ -0.48
PABPC4-220ENST00000525669 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
PABPC4-220ENST00000525669 LRPPRCP42704 1394 aaKnown RBP12.06□□□□□ -0.48
PABPC4-220ENST00000525669 PRAM1Q96QH2 718 aa12.06□□□□□ -0.48
PABPC4-220ENST00000525669 MINK1Q8N4C8 1332 aaPredicted RBP12.06□□□□□ -0.48
PABPC4-220ENST00000525669 CPS1P31327 1500 aa12.06□□□□□ -0.48
PABPC4-220ENST00000525669 PLEKHH1Q9ULM0 1364 aa12.05□□□□□ -0.48
PABPC4-220ENST00000525669 SBNO2Q9Y2G9 1366 aa12.05□□□□□ -0.48
PABPC4-220ENST00000525669 WAPLQ7Z5K2 1190 aa12.05□□□□□ -0.48
PABPC4-220ENST00000525669 POGKQ9P215 609 aa12.05□□□□□ -0.48
PABPC4-220ENST00000525669 MED14O60244 1454 aa12.05□□□□□ -0.48
PABPC4-220ENST00000525669 PANK3Q9H999 370 aa12.04□□□□□ -0.48
PABPC4-220ENST00000525669 DIP2AQ14689 1571 aa12.04□□□□□ -0.48
PABPC4-220ENST00000525669 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
PABPC4-220ENST00000525669 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
PABPC4-220ENST00000525669 CDCA8Q53HL2 280 aa12.03□□□□□ -0.48
PABPC4-220ENST00000525669 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.03□□□□□ -0.48
PABPC4-220ENST00000525669 PRKRIP1Q9H875 184 aaPredicted RBP12.02□□□□□ -0.49
PABPC4-220ENST00000525669 XRN1Q8IZH2 1706 aaKnown RBP12.02□□□□□ -0.49
PABPC4-220ENST00000525669 ABCC11Q96J66 1382 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms