RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 LNPKQ9C0E8 428 aa10.33□□□□□ -0.76
CHD7-203ENST00000525508 SLC26A8Q96RN1 970 aa10.33□□□□□ -0.76
CHD7-203ENST00000525508 NLRP2Q9NX02 1062 aa10.33□□□□□ -0.76
CHD7-203ENST00000525508 UACAQ9BZF9 1416 aa10.32□□□□□ -0.76
CHD7-203ENST00000525508 CCDC184Q52MB2 194 aa10.32□□□□□ -0.76
CHD7-203ENST00000525508 GPATCH3Q96I76 525 aa10.32□□□□□ -0.76
CHD7-203ENST00000525508 TTC5Q8N0Z6 440 aa10.32□□□□□ -0.76
CHD7-203ENST00000525508 PRG4Q92954 1404 aaPredicted RBP10.32□□□□□ -0.76
CHD7-203ENST00000525508 G3V3G9 751 aa10.31□□□□□ -0.76
CHD7-203ENST00000525508 MSNP26038 577 aaKnown RBP10.31□□□□□ -0.76
CHD7-203ENST00000525508 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
CHD7-203ENST00000525508 CREBRFQ8IUR6 639 aa10.31□□□□□ -0.76
CHD7-203ENST00000525508 PRAM1Q96QH2 718 aa10.31□□□□□ -0.76
CHD7-203ENST00000525508 DZIP1LQ8IYY4 767 aaKnown RBP10.31□□□□□ -0.76
CHD7-203ENST00000525508 TCP11L2Q8N4U5 519 aa10.31□□□□□ -0.76
CHD7-203ENST00000525508 FANCIQ9NVI1 1328 aa10.31□□□□□ -0.76
CHD7-203ENST00000525508 CENPQQ7L2Z9 268 aaPredicted RBP10.31□□□□□ -0.76
CHD7-203ENST00000525508 CHMP4AQ9BY43 222 aa10.31□□□□□ -0.76
CHD7-203ENST00000525508 TSPYL4Q9UJ04 414 aa10.31□□□□□ -0.76
CHD7-203ENST00000525508 SCAPERQ9BY12 1400 aa10.3□□□□□ -0.76
CHD7-203ENST00000525508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.3□□□□□ -0.76
CHD7-203ENST00000525508 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
CHD7-203ENST00000525508 CFAP44Q96MT7 982 aa10.29□□□□□ -0.76
CHD7-203ENST00000525508 SYNJ1O43426 1573 aa10.29□□□□□ -0.76
CHD7-203ENST00000525508 NRDCO43847 1150 aa10.29□□□□□ -0.76
CHD7-203ENST00000525508 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
CHD7-203ENST00000525508 TMX4Q9H1E5 349 aaPredicted RBP10.29□□□□□ -0.76
CHD7-203ENST00000525508 FAM177BA6PVY3 158 aa10.29□□□□□ -0.76
CHD7-203ENST00000525508 NEXNQ0ZGT2 675 aa10.29□□□□□ -0.76
CHD7-203ENST00000525508 ABTB2Q8N961 1025 aa10.29□□□□□ -0.76
CHD7-203ENST00000525508 HDAC5Q9UQL6 1122 aa10.29□□□□□ -0.76
CHD7-203ENST00000525508 ESCO1Q5FWF5 840 aa10.28□□□□□ -0.76
CHD7-203ENST00000525508 TSR2Q969E8 191 aaKnown RBP10.28□□□□□ -0.76
CHD7-203ENST00000525508 RAPGEF4Q8WZA2 1011 aa10.28□□□□□ -0.76
CHD7-203ENST00000525508 CABP1Q9NZU7 370 aa10.28□□□□□ -0.76
CHD7-203ENST00000525508 GOLGA6L6A8MZA4 724 aa10.27□□□□□ -0.76
CHD7-203ENST00000525508 ATF3P18847 181 aa10.27□□□□□ -0.76
CHD7-203ENST00000525508 PRKAR2BP31323 418 aa10.27□□□□□ -0.76
CHD7-203ENST00000525508 L1TD1Q5T7N2 865 aaKnown RBP10.27□□□□□ -0.76
CHD7-203ENST00000525508 XPCQ01831 940 aaPredicted RBP10.27□□□□□ -0.77
CHD7-203ENST00000525508 ST18O60284 1047 aa10.27□□□□□ -0.77
CHD7-203ENST00000525508 RASSF8Q8NHQ8 419 aa10.27□□□□□ -0.77
CHD7-203ENST00000525508 RBM33Q96EV2 1170 aaKnown RBP10.27□□□□□ -0.77
CHD7-203ENST00000525508 ANO8Q9HCE9 1232 aaPredicted RBP10.27□□□□□ -0.77
CHD7-203ENST00000525508 CASKIN1Q8WXD9 1431 aa10.27□□□□□ -0.77
CHD7-203ENST00000525508 ARHGAP5Q13017 1502 aa10.27□□□□□ -0.77
CHD7-203ENST00000525508 GRIN2BQ13224 1484 aa10.26□□□□□ -0.77
CHD7-203ENST00000525508 RAD21O60216 631 aa10.26□□□□□ -0.77
CHD7-203ENST00000525508 C1orf115Q9H7X2 142 aa10.26□□□□□ -0.77
CHD7-203ENST00000525508 ANO2Q9NQ90 1003 aa10.26□□□□□ -0.77
CHD7-203ENST00000525508 DDX19BQ9UMR2 479 aa10.26□□□□□ -0.77
CHD7-203ENST00000525508 PPP2R1AP30153 589 aa10.26□□□□□ -0.77
CHD7-203ENST00000525508 PDE4CQ08493 712 aa10.26□□□□□ -0.77
CHD7-203ENST00000525508 KIF16BQ96L93 1317 aa10.26□□□□□ -0.77
CHD7-203ENST00000525508 DIAPH3Q9NSV4 1193 aa10.26□□□□□ -0.77
CHD7-203ENST00000525508 APPP05067 770 aa10.25□□□□□ -0.77
CHD7-203ENST00000525508 BCAR3O75815 825 aa10.25□□□□□ -0.77
CHD7-203ENST00000525508 EXOSC9Q06265 439 aaKnown RBP10.25□□□□□ -0.77
CHD7-203ENST00000525508 SF3A1Q15459 793 aaKnown RBP10.25□□□□□ -0.77
CHD7-203ENST00000525508 STRN4Q9NRL3 753 aa10.25□□□□□ -0.77
CHD7-203ENST00000525508 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.24□□□□□ -0.77
CHD7-203ENST00000525508 GOLGA6L3A6NEY3 463 aa10.24□□□□□ -0.77
CHD7-203ENST00000525508 MCTP1Q6DN14 999 aa10.24□□□□□ -0.77
CHD7-203ENST00000525508 PROSER2Q86WR7 435 aaPredicted RBP10.24□□□□□ -0.77
CHD7-203ENST00000525508 IFIT2P09913 472 aaKnown RBP10.24□□□□□ -0.77
CHD7-203ENST00000525508 NEUROD6Q96NK8 337 aa10.24□□□□□ -0.77
CHD7-203ENST00000525508 API5Q9BZZ5 524 aaKnown RBP10.24□□□□□ -0.77
CHD7-203ENST00000525508 DDX49Q9Y6V7 483 aaKnown RBP10.24□□□□□ -0.77
CHD7-203ENST00000525508 CHAF1AQ13111 956 aaPredicted RBP10.23□□□□□ -0.77
CHD7-203ENST00000525508 SULT6B1Q6IMI4 303 aa10.23□□□□□ -0.77
CHD7-203ENST00000525508 FOSBP53539 338 aa10.23□□□□□ -0.77
CHD7-203ENST00000525508 GNAI1P63096 354 aa10.23□□□□□ -0.77
CHD7-203ENST00000525508 RRS1Q15050 365 aaKnown RBP10.23□□□□□ -0.77
CHD7-203ENST00000525508 VPS53Q5VIR6 699 aa10.23□□□□□ -0.77
CHD7-203ENST00000525508 RIC3Q7Z5B4 369 aa10.23□□□□□ -0.77
CHD7-203ENST00000525508 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
CHD7-203ENST00000525508 CNTLNQ9NXG0 1405 aa10.22□□□□□ -0.77
CHD7-203ENST00000525508 CDK19Q9BWU1 502 aa10.22□□□□□ -0.77
CHD7-203ENST00000525508 FYCO1Q9BQS8 1478 aa10.22□□□□□ -0.77
CHD7-203ENST00000525508 G3BP1Q13283 466 aaKnown RBP eCLIP10.22□□□□□ -0.778e-6■■□□□ 11.5
CHD7-203ENST00000525508 FAM184AQ8NB25 1140 aa10.22□□□□□ -0.77
CHD7-203ENST00000525508 H3BQV1 296 aa10.21□□□□□ -0.77
CHD7-203ENST00000525508 IFFO2Q5TF58 517 aa10.21□□□□□ -0.77
CHD7-203ENST00000525508 KLHL34Q8N239 644 aa10.21□□□□□ -0.77
CHD7-203ENST00000525508 KIAA2012Q0VF49 1180 aa10.21□□□□□ -0.77
CHD7-203ENST00000525508 KDM4AO75164 1064 aa10.21□□□□□ -0.78
CHD7-203ENST00000525508 SYNJ2O15056 1496 aa10.21□□□□□ -0.78
CHD7-203ENST00000525508 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.78
CHD7-203ENST00000525508 C9orf84Q5VXU9 1444 aa10.2□□□□□ -0.78
CHD7-203ENST00000525508 WAPLQ7Z5K2 1190 aa10.2□□□□□ -0.78
CHD7-203ENST00000525508 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
CHD7-203ENST00000525508 TOPBP1Q92547 1522 aa10.2□□□□□ -0.78
CHD7-203ENST00000525508 CUX1P39880 1505 aa10.2□□□□□ -0.78
CHD7-203ENST00000525508 C11orf95C9JLR9 678 aaPredicted RBP10.2□□□□□ -0.78
CHD7-203ENST00000525508 PES1O00541 588 aaKnown RBP10.2□□□□□ -0.78
CHD7-203ENST00000525508 DDX58O95786 925 aaKnown RBP10.2□□□□□ -0.78
CHD7-203ENST00000525508 SYAP1Q96A49 352 aaPredicted RBP10.2□□□□□ -0.78
CHD7-203ENST00000525508 THUMPD2Q9BTF0 503 aaKnown RBP10.2□□□□□ -0.78
CHD7-203ENST00000525508 PRXQ9BXM0 1461 aa10.19□□□□□ -0.78
CHD7-203ENST00000525508 MARCH6O60337 910 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms