RNA–Protein interactions for RNA: ENST00000524998.1

RECQL4-202, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-202ENST00000524998 PHF23Q9BUL5 403 aaPredicted RBP30.17■■■□□ 2.42
RECQL4-202ENST00000524998 MED1Q15648 1581 aaPredicted RBP30.16■■■□□ 2.42
RECQL4-202ENST00000524998 TMEM94Q12767 1356 aa30.15■■■□□ 2.42
RECQL4-202ENST00000524998 UNC13BO14795 1591 aa30.13■■■□□ 2.41
RECQL4-202ENST00000524998 GCC2Q8IWJ2 1684 aa30.11■■■□□ 2.41
RECQL4-202ENST00000524998 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.1■■■□□ 2.41
RECQL4-202ENST00000524998 NUP155O75694 1391 aa30.1■■■□□ 2.41
RECQL4-202ENST00000524998 RIMS2Q9UQ26 1411 aa30.1■■■□□ 2.41
RECQL4-202ENST00000524998 PLEKHG1Q9ULL1 1385 aa30.08■■■□□ 2.41
RECQL4-202ENST00000524998 RBM33Q96EV2 1170 aaKnown RBP30.08■■■□□ 2.41
RECQL4-202ENST00000524998 ZFYVE9O95405 1425 aa30.06■■■□□ 2.4
RECQL4-202ENST00000524998 XIRP1Q702N8 1843 aaKnown RBP30.06■■■□□ 2.4
RECQL4-202ENST00000524998 NKTRP30414 1462 aaKnown RBP30.05■■■□□ 2.4
RECQL4-202ENST00000524998 TMEM131LA2VDJ0 1609 aa30.04■■■□□ 2.4
RECQL4-202ENST00000524998 FAM135BQ49AJ0 1406 aa30.03■■■□□ 2.4
RECQL4-202ENST00000524998 IQGAP3Q86VI3 1631 aa30.03■■■□□ 2.4
RECQL4-202ENST00000524998 E9PCH4 1651 aa30.02■■■□□ 2.4
RECQL4-202ENST00000524998 MSH6P52701 1360 aa30.02■■■□□ 2.4
RECQL4-202ENST00000524998 MYO5BQ9ULV0 1848 aa30.01■■■□□ 2.4
RECQL4-202ENST00000524998 NUTM2DQ5VT03 806 aaPredicted RBP30■■■□□ 2.39
RECQL4-202ENST00000524998 TBX22Q9Y458 520 aa29.99■■■□□ 2.39
RECQL4-202ENST00000524998 NWD1Q149M9 1564 aa29.98■■■□□ 2.39
RECQL4-202ENST00000524998 C14orf37Q86TY3 774 aa29.96■■■□□ 2.39
RECQL4-202ENST00000524998 SLAIN2Q9P270 581 aa29.92■■■□□ 2.38
RECQL4-202ENST00000524998 ZNF326Q5BKZ1 582 aaKnown RBP29.89■■■□□ 2.38
RECQL4-202ENST00000524998 CHD2O14647 1828 aaKnown RBP29.89■■■□□ 2.38
RECQL4-202ENST00000524998 ROBO1Q9Y6N7 1651 aa29.88■■■□□ 2.37
RECQL4-202ENST00000524998 PIK3R4Q99570 1358 aa29.87■■■□□ 2.37
RECQL4-202ENST00000524998 ADAMTS13Q76LX8 1427 aa29.86■■■□□ 2.37
RECQL4-202ENST00000524998 DIP2AQ14689 1571 aa29.86■■■□□ 2.37
RECQL4-202ENST00000524998 NCOA3Q9Y6Q9 1424 aa29.85■■■□□ 2.37
RECQL4-202ENST00000524998 RRBP1Q9P2E9 1410 aaKnown RBP29.83■■■□□ 2.37
RECQL4-202ENST00000524998 ATF3P18847 181 aa29.82■■■□□ 2.36
RECQL4-202ENST00000524998 AMOTL2Q9Y2J4 779 aa29.81■■■□□ 2.36
RECQL4-202ENST00000524998 CADPS2Q86UW7 1296 aa29.8■■■□□ 2.36
RECQL4-202ENST00000524998 C19orf44Q9H6X5 657 aa29.8■■■□□ 2.36
RECQL4-202ENST00000524998 TRPM2O94759 1503 aa29.8■■■□□ 2.36
RECQL4-202ENST00000524998 SPHKAPQ2M3C7 1700 aa29.79■■■□□ 2.36
RECQL4-202ENST00000524998 TRIM52Q96A61 297 aa29.78■■■□□ 2.36
RECQL4-202ENST00000524998 NAIPQ13075 1403 aa29.76■■■□□ 2.35
RECQL4-202ENST00000524998 RGS17Q9UGC6 210 aaPredicted RBP29.73■■■□□ 2.35
RECQL4-202ENST00000524998 PHLPP1O60346 1717 aa29.73■■■□□ 2.35
RECQL4-202ENST00000524998 JCADQ9P266 1359 aa29.72■■■□□ 2.35
RECQL4-202ENST00000524998 PTPRUQ92729 1446 aa29.7■■■□□ 2.34
RECQL4-202ENST00000524998 SETBP1Q9Y6X0 1596 aa29.68■■■□□ 2.34
RECQL4-202ENST00000524998 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.67■■■□□ 2.34
RECQL4-202ENST00000524998 SLC4A1APQ9BWU0 796 aaKnown RBP29.66■■■□□ 2.34
RECQL4-202ENST00000524998 HFM1A2PYH4 1435 aa29.65■■■□□ 2.34
RECQL4-202ENST00000524998 CLTCL1P53675 1640 aa29.65■■■□□ 2.34
RECQL4-202ENST00000524998 METP08581 1390 aa29.64■■■□□ 2.33
RECQL4-202ENST00000524998 NRXN3Q9Y4C0 1643 aa29.62■■■□□ 2.33
RECQL4-202ENST00000524998 VGFO15240 615 aaPredicted RBP29.61■■■□□ 2.33
RECQL4-202ENST00000524998 POTEAQ6S8J7 498 aa29.61■■■□□ 2.33
RECQL4-202ENST00000524998 KIF1BO60333 1816 aa29.6■■■□□ 2.33
RECQL4-202ENST00000524998 MEX3CQ5U5Q3 659 aaKnown RBP29.6■■■□□ 2.33
RECQL4-202ENST00000524998 DCCP43146 1447 aa29.6■■■□□ 2.33
RECQL4-202ENST00000524998 BRINP3Q76B58 766 aa29.59■■■□□ 2.33
RECQL4-202ENST00000524998 NEXMIFQ5QGS0 1516 aa29.59■■■□□ 2.33
RECQL4-202ENST00000524998 COL16A1Q07092 1604 aaPredicted RBP29.58■■■□□ 2.33
RECQL4-202ENST00000524998 SPATA31A6Q5VVP1 1343 aa29.58■■■□□ 2.33
RECQL4-202ENST00000524998 XRN1Q8IZH2 1706 aaKnown RBP29.58■■■□□ 2.33
RECQL4-202ENST00000524998 AHDC1Q5TGY3 1603 aaPredicted RBP29.55■■■□□ 2.32
RECQL4-202ENST00000524998 RPGRIP1LQ68CZ1 1315 aa29.53■■■□□ 2.32
RECQL4-202ENST00000524998 ADGRL3Q9HAR2 1447 aa29.5■■■□□ 2.31
RECQL4-202ENST00000524998 MST1RQ04912 1400 aa29.48■■■□□ 2.31
RECQL4-202ENST00000524998 ASXL1Q8IXJ9 1541 aa29.47■■■□□ 2.31
RECQL4-202ENST00000524998 NUTM2BA6NNL0 878 aaPredicted RBP29.46■■■□□ 2.31
RECQL4-202ENST00000524998 NUTM2EB1AL46 878 aaPredicted RBP29.46■■■□□ 2.31
RECQL4-202ENST00000524998 FOXD1Q16676 465 aa29.46■■■□□ 2.31
RECQL4-202ENST00000524998 ZNF772Q68DY9 489 aaPredicted RBP29.46■■■□□ 2.31
RECQL4-202ENST00000524998 NUTM2AQ8IVF1 878 aaPredicted RBP29.46■■■□□ 2.31
RECQL4-202ENST00000524998 LRRC59Q96AG4 307 aaKnown RBP29.44■■■□□ 2.3
RECQL4-202ENST00000524998 LRP6O75581 1613 aa29.44■■■□□ 2.3
RECQL4-202ENST00000524998 SHPRHQ149N8 1683 aa29.44■■■□□ 2.3
RECQL4-202ENST00000524998 CCDC144AA2RUR9 1427 aa29.42■■■□□ 2.3
RECQL4-202ENST00000524998 PTCH1Q13635 1447 aa29.42■■■□□ 2.3
RECQL4-202ENST00000524998 SETD5Q9C0A6 1442 aa29.39■■■□□ 2.3
RECQL4-202ENST00000524998 RGL3Q3MIN7 710 aa29.39■■■□□ 2.3
RECQL4-202ENST00000524998 MPHOSPH9Q99550 1183 aa29.39■■■□□ 2.3
RECQL4-202ENST00000524998 ROBO2Q9HCK4 1378 aa29.39■■■□□ 2.29
RECQL4-202ENST00000524998 NALCNQ8IZF0 1738 aa29.37■■■□□ 2.29
RECQL4-202ENST00000524998 DDX17Q92841 729 aaKnown RBP29.37■■■□□ 2.29
RECQL4-202ENST00000524998 C1orf167Q5SNV9 1468 aa29.35■■■□□ 2.29
RECQL4-202ENST00000524998 PPLO60437 1756 aa29.34■■■□□ 2.29
RECQL4-202ENST00000524998 NHSL1Q5SYE7 1610 aa29.34■■■□□ 2.29
RECQL4-202ENST00000524998 ACIN1Q9UKV3 1341 aaKnown RBP29.33■■■□□ 2.29
RECQL4-202ENST00000524998 SETD1AO15047 1707 aaKnown RBP29.31■■■□□ 2.28
RECQL4-202ENST00000524998 ANKRD30BQ9BXX2 1392 aa29.3■■■□□ 2.28
RECQL4-202ENST00000524998 ADGRF5Q8IZF2 1346 aa29.3■■■□□ 2.28
RECQL4-202ENST00000524998 RXRBP28702 533 aa29.3■■■□□ 2.28
RECQL4-202ENST00000524998 PRAG1Q86YV5 1406 aa29.29■■■□□ 2.28
RECQL4-202ENST00000524998 ORAI2Q96SN7 254 aa29.29■■■□□ 2.28
RECQL4-202ENST00000524998 STK26Q9P289 416 aa29.29■■■□□ 2.28
RECQL4-202ENST00000524998 AFF2P51816 1311 aa29.28■■■□□ 2.28
RECQL4-202ENST00000524998 C8orf37Q96NL8 207 aa29.28■■■□□ 2.28
RECQL4-202ENST00000524998 PNPLA6Q8IY17 1366 aa29.27■■■□□ 2.28
RECQL4-202ENST00000524998 SPATA31E1Q6ZUB1 1445 aa29.25■■■□□ 2.27
RECQL4-202ENST00000524998 ADAMTS2O95450 1211 aa29.22■■■□□ 2.27
RECQL4-202ENST00000524998 ESCO1Q5FWF5 840 aa29.22■■■□□ 2.27
RECQL4-202ENST00000524998 SOS2Q07890 1332 aaPredicted RBP29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms