RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
CASP4-204ENST00000524843 KTN1Q86UP2 1357 aaKnown RBP10.33□□□□□ -0.76
CASP4-204ENST00000524843 ARHGAP31Q2M1Z3 1444 aa10.33□□□□□ -0.76
CASP4-204ENST00000524843 MYT1LQ9UL68 1186 aa10.32□□□□□ -0.76
CASP4-204ENST00000524843 PIK3C2BO00750 1634 aa10.31□□□□□ -0.76
CASP4-204ENST00000524843 AGLP35573 1532 aa10.31□□□□□ -0.76
CASP4-204ENST00000524843 MROH2AA6NES4 1674 aa10.31□□□□□ -0.76
CASP4-204ENST00000524843 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
CASP4-204ENST00000524843 EIF3AQ14152 1382 aaKnown RBP10.3□□□□□ -0.76
CASP4-204ENST00000524843 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
CASP4-204ENST00000524843 SCAF11Q99590 1463 aaKnown RBP10.3□□□□□ -0.76
CASP4-204ENST00000524843 MYO3AQ8NEV4 1616 aa10.29□□□□□ -0.76
CASP4-204ENST00000524843 PPLO60437 1756 aa10.29□□□□□ -0.76
CASP4-204ENST00000524843 ARHGEF40Q8TER5 1519 aa10.29□□□□□ -0.76
CASP4-204ENST00000524843 NPATQ14207 1427 aa10.29□□□□□ -0.76
CASP4-204ENST00000524843 NOS1P29475 1434 aa10.28□□□□□ -0.76
CASP4-204ENST00000524843 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
CASP4-204ENST00000524843 SLC24A1O60721 1099 aa10.27□□□□□ -0.77
CASP4-204ENST00000524843 PRKRIP1Q9H875 184 aaPredicted RBP10.27□□□□□ -0.77
CASP4-204ENST00000524843 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
CASP4-204ENST00000524843 SYNMO15061 1565 aa10.26□□□□□ -0.77
CASP4-204ENST00000524843 KIF13AQ9H1H9 1805 aa10.26□□□□□ -0.77
CASP4-204ENST00000524843 C11orf95C9JLR9 678 aaPredicted RBP10.26□□□□□ -0.77
CASP4-204ENST00000524843 PREX1Q8TCU6 1659 aa10.25□□□□□ -0.77
CASP4-204ENST00000524843 RGL3Q3MIN7 710 aa10.25□□□□□ -0.77
CASP4-204ENST00000524843 CYB5RLQ6IPT4 315 aa10.25□□□□□ -0.77
CASP4-204ENST00000524843 UGGT1Q9NYU2 1555 aa10.25□□□□□ -0.77
CASP4-204ENST00000524843 RPGRIP1LQ68CZ1 1315 aa10.25□□□□□ -0.77
CASP4-204ENST00000524843 ST20-MTHFSA0A0A6YYL1 179 aa10.24□□□□□ -0.77
CASP4-204ENST00000524843 KDM5AP29375 1690 aaKnown RBP10.24□□□□□ -0.77
CASP4-204ENST00000524843 SBNO2Q9Y2G9 1366 aa10.24□□□□□ -0.77
CASP4-204ENST00000524843 SIGLEC1Q9BZZ2 1709 aa10.24□□□□□ -0.77
CASP4-204ENST00000524843 CAPN15O75808 1086 aa10.23□□□□□ -0.77
CASP4-204ENST00000524843 CDCA8Q53HL2 280 aa10.23□□□□□ -0.77
CASP4-204ENST00000524843 WASHC2CQ9Y4E1 1318 aa10.23□□□□□ -0.77
CASP4-204ENST00000524843 TSPOAP1O95153 1857 aa10.23□□□□□ -0.77
CASP4-204ENST00000524843 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
CASP4-204ENST00000524843 TMF1P82094 1093 aa10.22□□□□□ -0.77
CASP4-204ENST00000524843 PIK3C2GO75747 1445 aa10.22□□□□□ -0.77
CASP4-204ENST00000524843 ZFYVE9O95405 1425 aa10.21□□□□□ -0.78
CASP4-204ENST00000524843 NEXMIFQ5QGS0 1516 aa10.21□□□□□ -0.78
CASP4-204ENST00000524843 BRD4O60885 1362 aaPredicted RBP10.2□□□□□ -0.78
CASP4-204ENST00000524843 RAPGEF3O95398 923 aa10.2□□□□□ -0.78
CASP4-204ENST00000524843 MYOM1P52179 1685 aa10.2□□□□□ -0.78
CASP4-204ENST00000524843 FAM69CQ0P6D2 419 aa10.2□□□□□ -0.78
CASP4-204ENST00000524843 RALBP1Q15311 655 aa10.2□□□□□ -0.78
CASP4-204ENST00000524843 TESK2Q96S53 571 aa10.2□□□□□ -0.78
CASP4-204ENST00000524843 ATF5Q9Y2D1 282 aaPredicted RBP10.2□□□□□ -0.78
CASP4-204ENST00000524843 SPATA31D1Q6ZQQ2 1576 aa10.19□□□□□ -0.78
CASP4-204ENST00000524843 ERVK-7P63135 1459 aa10.19□□□□□ -0.78
CASP4-204ENST00000524843 INSRP06213 1382 aa10.19□□□□□ -0.78
CASP4-204ENST00000524843 NBPF1Q3BBV0 1214 aa10.19□□□□□ -0.78
CASP4-204ENST00000524843 PARD3Q8TEW0 1356 aa10.18□□□□□ -0.78
CASP4-204ENST00000524843 DISP3Q9P2K9 1392 aa10.18□□□□□ -0.78
CASP4-204ENST00000524843 MYBBP1AQ9BQG0 1328 aaKnown RBP10.18□□□□□ -0.78
CASP4-204ENST00000524843 MRS2Q9HD23 443 aa10.18□□□□□ -0.78
CASP4-204ENST00000524843 SLC52A1Q9NWF4 448 aa10.18□□□□□ -0.78
CASP4-204ENST00000524843 TMEM131LA2VDJ0 1609 aa10.18□□□□□ -0.78
CASP4-204ENST00000524843 ADGRB1O14514 1584 aa10.18□□□□□ -0.78
CASP4-204ENST00000524843 TRHP20396 242 aaPredicted RBP10.17□□□□□ -0.78
CASP4-204ENST00000524843 GGT6Q6P531 493 aa10.17□□□□□ -0.78
CASP4-204ENST00000524843 NPC1L1Q9UHC9 1359 aa10.16□□□□□ -0.78
CASP4-204ENST00000524843 QRICH2Q9H0J4 1663 aa10.16□□□□□ -0.78
CASP4-204ENST00000524843 ZBED9Q6R2W3 1325 aa10.16□□□□□ -0.78
CASP4-204ENST00000524843 SPINK5Q9NQ38 1064 aaPredicted RBP10.16□□□□□ -0.78
CASP4-204ENST00000524843 ARHGEF28Q8N1W1 1705 aaKnown RBP10.16□□□□□ -0.78
CASP4-204ENST00000524843 CLTCQ00610 1675 aaKnown RBP10.15□□□□□ -0.78
CASP4-204ENST00000524843 POLR3GLQ9BT43 218 aa10.15□□□□□ -0.78
CASP4-204ENST00000524843 CFAP65Q6ZU64 1925 aaKnown RBP10.15□□□□□ -0.79
CASP4-204ENST00000524843 USP32Q8NFA0 1604 aa10.15□□□□□ -0.79
CASP4-204ENST00000524843 HNRNPUQ00839 825 aaKnown RBP eCLIP10.14□□□□□ -0.79
CASP4-204ENST00000524843 PELP1Q8IZL8 1130 aaKnown RBP10.14□□□□□ -0.79
CASP4-204ENST00000524843 ASXL1Q8IXJ9 1541 aa10.13□□□□□ -0.79
CASP4-204ENST00000524843 MYO5BQ9ULV0 1848 aa10.13□□□□□ -0.79
CASP4-204ENST00000524843 NEFLP07196 543 aa10.13□□□□□ -0.79
CASP4-204ENST00000524843 NLRP13Q86W25 1043 aa10.13□□□□□ -0.79
CASP4-204ENST00000524843 LRPPRCP42704 1394 aaKnown RBP10.13□□□□□ -0.79
CASP4-204ENST00000524843 ADGRF5Q8IZF2 1346 aa10.12□□□□□ -0.79
CASP4-204ENST00000524843 VGFO15240 615 aaPredicted RBP10.12□□□□□ -0.79
CASP4-204ENST00000524843 PUS7Q96PZ0 661 aaKnown RBP10.11□□□□□ -0.79
CASP4-204ENST00000524843 C14orf93Q9H972 538 aaKnown RBP10.11□□□□□ -0.79
CASP4-204ENST00000524843 CENPJQ9HC77 1338 aaPredicted RBP10.1□□□□□ -0.79
CASP4-204ENST00000524843 PER1O15534 1290 aaPredicted RBP10.1□□□□□ -0.79
CASP4-204ENST00000524843 ZBTB12Q9Y330 459 aaPredicted RBP10.1□□□□□ -0.79
CASP4-204ENST00000524843 DLC1Q96QB1 1528 aa10.09□□□□□ -0.79
CASP4-204ENST00000524843 CFAP70Q5T0N1 1121 aa10.09□□□□□ -0.79
CASP4-204ENST00000524843 TMC1Q8TDI8 760 aa10.09□□□□□ -0.79
CASP4-204ENST00000524843 NINLQ9Y2I6 1382 aa10.09□□□□□ -0.79
CASP4-204ENST00000524843 CHGAP10645 457 aaKnown RBP10.08□□□□□ -0.8
CASP4-204ENST00000524843 SUPT16HQ9Y5B9 1047 aaKnown RBP10.08□□□□□ -0.8
CASP4-204ENST00000524843 ERICH6BQ5W0A0 696 aa10.07□□□□□ -0.8
CASP4-204ENST00000524843 PANK3Q9H999 370 aa10.07□□□□□ -0.8
CASP4-204ENST00000524843 KNSTRNQ9Y448 316 aa10.07□□□□□ -0.8
CASP4-204ENST00000524843 SETD1AO15047 1707 aaKnown RBP10.07□□□□□ -0.8
CASP4-204ENST00000524843 KNDC1Q76NI1 1749 aa10.07□□□□□ -0.8
CASP4-204ENST00000524843 BLMP54132 1417 aaPredicted RBP10.07□□□□□ -0.8
CASP4-204ENST00000524843 SMG6Q86US8 1419 aaKnown RBP10.07□□□□□ -0.8
CASP4-204ENST00000524843 A2ML1A8K2U0 1454 aa10.06□□□□□ -0.8
CASP4-204ENST00000524843 CCDC184Q52MB2 194 aa10.06□□□□□ -0.8
CASP4-204ENST00000524843 FAM9BQ8IZU0 186 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms