RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 CARD11Q9BXL7 1154 aa16.57■□□□□ 0.24
CSTF3-205ENST00000524775 SLC52A1Q9NWF4 448 aa16.57■□□□□ 0.24
CSTF3-205ENST00000524775 ZMYM3Q14202 1370 aa16.56■□□□□ 0.24
CSTF3-205ENST00000524775 RPGRIP1LQ68CZ1 1315 aa16.56■□□□□ 0.24
CSTF3-205ENST00000524775 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
CSTF3-205ENST00000524775 DDX10Q13206 875 aaKnown RBP16.56■□□□□ 0.24
CSTF3-205ENST00000524775 FER1L4A9Z1Z3 1794 aa16.56■□□□□ 0.24
CSTF3-205ENST00000524775 CCDC7Q96M83 1385 aa16.55■□□□□ 0.24
CSTF3-205ENST00000524775 C3P01024 1663 aa16.54■□□□□ 0.24
CSTF3-205ENST00000524775 ZFYVE9O95405 1425 aa16.53■□□□□ 0.24
CSTF3-205ENST00000524775 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.23
CSTF3-205ENST00000524775 PIK3C2GO75747 1445 aa16.52■□□□□ 0.23
CSTF3-205ENST00000524775 SETBP1Q9Y6X0 1596 aa16.51■□□□□ 0.23
CSTF3-205ENST00000524775 KIF7Q2M1P5 1343 aa16.5■□□□□ 0.23
CSTF3-205ENST00000524775 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
CSTF3-205ENST00000524775 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
CSTF3-205ENST00000524775 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
CSTF3-205ENST00000524775 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
CSTF3-205ENST00000524775 ADGRB1O14514 1584 aa16.48■□□□□ 0.23
CSTF3-205ENST00000524775 CFAP70Q5T0N1 1121 aa16.48■□□□□ 0.23
CSTF3-205ENST00000524775 UBR1Q8IWV7 1749 aa16.48■□□□□ 0.23
CSTF3-205ENST00000524775 TESK2Q96S53 571 aa16.47■□□□□ 0.23
CSTF3-205ENST00000524775 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
CSTF3-205ENST00000524775 ADAMTSL3P82987 1691 aa16.46■□□□□ 0.23
CSTF3-205ENST00000524775 MYO3AQ8NEV4 1616 aa16.46■□□□□ 0.23
CSTF3-205ENST00000524775 C14orf93Q9H972 538 aaKnown RBP16.46■□□□□ 0.23
CSTF3-205ENST00000524775 SETD1AO15047 1707 aaKnown RBP16.45■□□□□ 0.22
CSTF3-205ENST00000524775 TNRQ92752 1358 aa16.44■□□□□ 0.22
CSTF3-205ENST00000524775 ESF1Q9H501 851 aaKnown RBP16.44■□□□□ 0.22
CSTF3-205ENST00000524775 VGFO15240 615 aaPredicted RBP16.43■□□□□ 0.22
CSTF3-205ENST00000524775 ASXL1Q8IXJ9 1541 aa16.42■□□□□ 0.22
CSTF3-205ENST00000524775 RIMS1Q86UR5 1692 aaKnown RBP16.42■□□□□ 0.22
CSTF3-205ENST00000524775 ARHGEF28Q8N1W1 1705 aaKnown RBP16.41■□□□□ 0.22
CSTF3-205ENST00000524775 NRXN3Q9Y4C0 1643 aa16.4■□□□□ 0.22
CSTF3-205ENST00000524775 RIMS2Q9UQ26 1411 aa16.39■□□□□ 0.21
CSTF3-205ENST00000524775 ALKQ9UM73 1620 aa16.39■□□□□ 0.21
CSTF3-205ENST00000524775 CEBPAP49715 358 aaPredicted RBP16.39■□□□□ 0.21
CSTF3-205ENST00000524775 NUTM2DQ5VT03 806 aaPredicted RBP16.39■□□□□ 0.21
CSTF3-205ENST00000524775 DISP3Q9P2K9 1392 aa16.38■□□□□ 0.21
CSTF3-205ENST00000524775 NLRP1Q9C000 1473 aa16.38■□□□□ 0.21
CSTF3-205ENST00000524775 QRICH2Q9H0J4 1663 aa16.37■□□□□ 0.21
CSTF3-205ENST00000524775 SETD1BQ9UPS6 1966 aaKnown RBP16.36■□□□□ 0.21
CSTF3-205ENST00000524775 PTPRMP28827 1452 aa16.35■□□□□ 0.21
CSTF3-205ENST00000524775 MYOM1P52179 1685 aa16.34■□□□□ 0.21
CSTF3-205ENST00000524775 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
CSTF3-205ENST00000524775 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
CSTF3-205ENST00000524775 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
CSTF3-205ENST00000524775 SBNO2Q9Y2G9 1366 aa16.33■□□□□ 0.2
CSTF3-205ENST00000524775 ARHGAP23Q9P227 1491 aa16.32■□□□□ 0.2
CSTF3-205ENST00000524775 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
CSTF3-205ENST00000524775 SLIT1O75093 1534 aa16.31■□□□□ 0.2
CSTF3-205ENST00000524775 TMF1P82094 1093 aa16.31■□□□□ 0.2
CSTF3-205ENST00000524775 ANP32CO43423 234 aa16.3■□□□□ 0.2
CSTF3-205ENST00000524775 ZNF142P52746 1687 aaPredicted RBP16.3■□□□□ 0.2
CSTF3-205ENST00000524775 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
CSTF3-205ENST00000524775 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
CSTF3-205ENST00000524775 TRAK1Q9UPV9 953 aa16.28■□□□□ 0.2
CSTF3-205ENST00000524775 KNDC1Q76NI1 1749 aa16.28■□□□□ 0.2
CSTF3-205ENST00000524775 YTHDC2Q9H6S0 1430 aaKnown RBP16.28■□□□□ 0.2
CSTF3-205ENST00000524775 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.2
CSTF3-205ENST00000524775 CEP170BQ9Y4F5 1589 aaPredicted RBP16.26■□□□□ 0.19
CSTF3-205ENST00000524775 DLC1Q96QB1 1528 aa16.26■□□□□ 0.19
CSTF3-205ENST00000524775 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
CSTF3-205ENST00000524775 MED14O60244 1454 aa16.26■□□□□ 0.19
CSTF3-205ENST00000524775 PER1O15534 1290 aaPredicted RBP16.25■□□□□ 0.19
CSTF3-205ENST00000524775 LTKP29376 864 aa16.25■□□□□ 0.19
CSTF3-205ENST00000524775 PRKRIP1Q9H875 184 aaPredicted RBP16.25■□□□□ 0.19
CSTF3-205ENST00000524775 ADAMTS13Q76LX8 1427 aa16.25■□□□□ 0.19
CSTF3-205ENST00000524775 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
CSTF3-205ENST00000524775 LRPPRCP42704 1394 aaKnown RBP16.24■□□□□ 0.19
CSTF3-205ENST00000524775 TULP4Q9NRJ4 1543 aa16.24■□□□□ 0.19
CSTF3-205ENST00000524775 HDGFP51858 240 aaKnown RBP16.23■□□□□ 0.19
CSTF3-205ENST00000524775 PLEKHG1Q9ULL1 1385 aa16.23■□□□□ 0.19
CSTF3-205ENST00000524775 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
CSTF3-205ENST00000524775 METP08581 1390 aa16.22■□□□□ 0.19
CSTF3-205ENST00000524775 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
CSTF3-205ENST00000524775 AEBP2Q6ZN18 517 aaPredicted RBP16.21■□□□□ 0.19
CSTF3-205ENST00000524775 ABCC11Q96J66 1382 aa16.21■□□□□ 0.19
CSTF3-205ENST00000524775 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
CSTF3-205ENST00000524775 THEMISQ8N1K5 641 aaPredicted RBP16.19■□□□□ 0.18
CSTF3-205ENST00000524775 PUS7Q96PZ0 661 aaKnown RBP16.19■□□□□ 0.18
CSTF3-205ENST00000524775 PANK3Q9H999 370 aa16.19■□□□□ 0.18
CSTF3-205ENST00000524775 STK26Q9P289 416 aa16.19■□□□□ 0.18
CSTF3-205ENST00000524775 TECPR2O15040 1411 aa16.19■□□□□ 0.18
CSTF3-205ENST00000524775 TXNDC2Q86VQ3 553 aa16.18■□□□□ 0.18
CSTF3-205ENST00000524775 CPS1P31327 1500 aa16.18■□□□□ 0.18
CSTF3-205ENST00000524775 CCDC184Q52MB2 194 aa16.17■□□□□ 0.18
CSTF3-205ENST00000524775 SIRT1Q96EB6 747 aa16.17■□□□□ 0.18
CSTF3-205ENST00000524775 DIP2AQ14689 1571 aa16.16■□□□□ 0.18
CSTF3-205ENST00000524775 PRAM1Q96QH2 718 aa16.15■□□□□ 0.18
CSTF3-205ENST00000524775 PARD3Q8TEW0 1356 aa16.14■□□□□ 0.17
CSTF3-205ENST00000524775 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
CSTF3-205ENST00000524775 PTPRUQ92729 1446 aa16.14■□□□□ 0.17
CSTF3-205ENST00000524775 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
CSTF3-205ENST00000524775 FAM135BQ49AJ0 1406 aa16.13■□□□□ 0.17
CSTF3-205ENST00000524775 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
CSTF3-205ENST00000524775 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.13■□□□□ 0.17
CSTF3-205ENST00000524775 EVC2Q86UK5 1308 aa16.13■□□□□ 0.17
CSTF3-205ENST00000524775 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
CSTF3-205ENST00000524775 XRN1Q8IZH2 1706 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms