RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 COL16A1Q07092 1604 aaPredicted RBP14.74□□□□□ -0.05
PTPN12-216ENST00000523952 TET3O43151 1660 aa14.74□□□□□ -0.05
PTPN12-216ENST00000523952 SHPRHQ149N8 1683 aa14.74□□□□□ -0.05
PTPN12-216ENST00000523952 KIF15Q9NS87 1388 aa14.73□□□□□ -0.05
PTPN12-216ENST00000523952 ADGRB3O60242 1522 aa14.73□□□□□ -0.05
PTPN12-216ENST00000523952 SLAIN2Q9P270 581 aa14.72□□□□□ -0.05
PTPN12-216ENST00000523952 PTPN23Q9H3S7 1636 aa14.71□□□□□ -0.05
PTPN12-216ENST00000523952 C14orf37Q86TY3 774 aa14.71□□□□□ -0.05
PTPN12-216ENST00000523952 TRIM52Q96A61 297 aa14.71□□□□□ -0.05
PTPN12-216ENST00000523952 RRP7BPQ9NSQ0 103 aa14.71□□□□□ -0.05
PTPN12-216ENST00000523952 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.7□□□□□ -0.06
PTPN12-216ENST00000523952 ZNF772Q68DY9 489 aaPredicted RBP14.7□□□□□ -0.06
PTPN12-216ENST00000523952 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
PTPN12-216ENST00000523952 IDI1Q13907 227 aa14.68□□□□□ -0.06
PTPN12-216ENST00000523952 SPATA31A6Q5VVP1 1343 aa14.67□□□□□ -0.06
PTPN12-216ENST00000523952 UPF1Q92900 1129 aaKnown RBP eCLIP14.67□□□□□ -0.06
PTPN12-216ENST00000523952 HOXD11P31277 338 aaPredicted RBP14.66□□□□□ -0.06
PTPN12-216ENST00000523952 LRP6O75581 1613 aa14.66□□□□□ -0.06
PTPN12-216ENST00000523952 LMTK2Q8IWU2 1503 aa14.66□□□□□ -0.06
PTPN12-216ENST00000523952 FGD6Q6ZV73 1430 aa14.66□□□□□ -0.06
PTPN12-216ENST00000523952 VPS8Q8N3P4 1428 aa14.66□□□□□ -0.06
PTPN12-216ENST00000523952 HDGFP51858 240 aaKnown RBP14.65□□□□□ -0.06
PTPN12-216ENST00000523952 AHDC1Q5TGY3 1603 aaPredicted RBP14.65□□□□□ -0.06
PTPN12-216ENST00000523952 RXRBP28702 533 aa14.63□□□□□ -0.07
PTPN12-216ENST00000523952 ANKRD30AQ9BXX3 1397 aa14.62□□□□□ -0.07
PTPN12-216ENST00000523952 ABCC5O15440 1437 aa14.62□□□□□ -0.07
PTPN12-216ENST00000523952 ATF3P18847 181 aa14.62□□□□□ -0.07
PTPN12-216ENST00000523952 DAPK1P53355 1430 aa14.62□□□□□ -0.07
PTPN12-216ENST00000523952 SLC52A1Q9NWF4 448 aa14.62□□□□□ -0.07
PTPN12-216ENST00000523952 NUTM2BA6NNL0 878 aaPredicted RBP14.61□□□□□ -0.07
PTPN12-216ENST00000523952 NUTM2EB1AL46 878 aaPredicted RBP14.61□□□□□ -0.07
PTPN12-216ENST00000523952 NUTM2AQ8IVF1 878 aaPredicted RBP14.61□□□□□ -0.07
PTPN12-216ENST00000523952 TMEM131LA2VDJ0 1609 aa14.61□□□□□ -0.07
PTPN12-216ENST00000523952 PLEKHG1Q9ULL1 1385 aa14.6□□□□□ -0.07
PTPN12-216ENST00000523952 DIP2AQ14689 1571 aa14.6□□□□□ -0.07
PTPN12-216ENST00000523952 NOS1P29475 1434 aa14.6□□□□□ -0.07
PTPN12-216ENST00000523952 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
PTPN12-216ENST00000523952 CADPS2Q86UW7 1296 aa14.6□□□□□ -0.07
PTPN12-216ENST00000523952 CHIC2Q9UKJ5 165 aa14.6□□□□□ -0.07
PTPN12-216ENST00000523952 RIMS2Q9UQ26 1411 aa14.59□□□□□ -0.07
PTPN12-216ENST00000523952 NCOA3Q9Y6Q9 1424 aa14.59□□□□□ -0.07
PTPN12-216ENST00000523952 APLP2Q06481 763 aa14.59□□□□□ -0.07
PTPN12-216ENST00000523952 RPRD2Q5VT52 1461 aaKnown RBP14.58□□□□□ -0.08
PTPN12-216ENST00000523952 CDK12Q9NYV4 1490 aaPredicted RBP14.58□□□□□ -0.08
PTPN12-216ENST00000523952 CHGAP10645 457 aaKnown RBP14.58□□□□□ -0.08
PTPN12-216ENST00000523952 NHSL1Q5SYE7 1610 aa14.58□□□□□ -0.08
PTPN12-216ENST00000523952 ZFYVE9O95405 1425 aa14.57□□□□□ -0.08
PTPN12-216ENST00000523952 TRPM2O94759 1503 aa14.56□□□□□ -0.08
PTPN12-216ENST00000523952 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTPN12-216ENST00000523952 C19orf44Q9H6X5 657 aa14.56□□□□□ -0.08
PTPN12-216ENST00000523952 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
PTPN12-216ENST00000523952 TBX22Q9Y458 520 aa14.55□□□□□ -0.08
PTPN12-216ENST00000523952 AFF2P51816 1311 aa14.55□□□□□ -0.08
PTPN12-216ENST00000523952 E9PCH4 1651 aa14.55□□□□□ -0.08
PTPN12-216ENST00000523952 NUTM2DQ5VT03 806 aaPredicted RBP14.53□□□□□ -0.08
PTPN12-216ENST00000523952 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
PTPN12-216ENST00000523952 ASXL1Q8IXJ9 1541 aa14.51□□□□□ -0.09
PTPN12-216ENST00000523952 PIK3R4Q99570 1358 aa14.51□□□□□ -0.09
PTPN12-216ENST00000523952 UNC13BO14795 1591 aa14.51□□□□□ -0.09
PTPN12-216ENST00000523952 C8orf37Q96NL8 207 aa14.5□□□□□ -0.09
PTPN12-216ENST00000523952 RBM6P78332 1123 aaKnown RBP14.49□□□□□ -0.09
PTPN12-216ENST00000523952 BRINP3Q76B58 766 aa14.49□□□□□ -0.09
PTPN12-216ENST00000523952 QTRT2Q9H974 415 aaKnown RBP14.49□□□□□ -0.09
PTPN12-216ENST00000523952 XRN1Q8IZH2 1706 aaKnown RBP14.49□□□□□ -0.09
PTPN12-216ENST00000523952 RGS12O14924 1447 aa14.49□□□□□ -0.09
PTPN12-216ENST00000523952 ADAMTS13Q76LX8 1427 aa14.49□□□□□ -0.09
PTPN12-216ENST00000523952 LRRC59Q96AG4 307 aaKnown RBP14.48□□□□□ -0.09
PTPN12-216ENST00000523952 AMOTL2Q9Y2J4 779 aa14.48□□□□□ -0.09
PTPN12-216ENST00000523952 NALCNQ8IZF0 1738 aa14.48□□□□□ -0.09
PTPN12-216ENST00000523952 ADGRL2O95490 1459 aa14.48□□□□□ -0.09
PTPN12-216ENST00000523952 DCCP43146 1447 aa14.48□□□□□ -0.09
PTPN12-216ENST00000523952 ANKRD50Q9ULJ7 1429 aa14.48□□□□□ -0.09
PTPN12-216ENST00000523952 NGLY1Q96IV0 654 aa14.47□□□□□ -0.09
PTPN12-216ENST00000523952 SETD5Q9C0A6 1442 aa14.47□□□□□ -0.09
PTPN12-216ENST00000523952 SPHKAPQ2M3C7 1700 aa14.46□□□□□ -0.09
PTPN12-216ENST00000523952 MARF1Q9Y4F3 1742 aaKnown RBP14.46□□□□□ -0.09
PTPN12-216ENST00000523952 FAM50AQ14320 339 aaKnown RBP14.46□□□□□ -0.09
PTPN12-216ENST00000523952 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.1
PTPN12-216ENST00000523952 IQGAP3Q86VI3 1631 aa14.45□□□□□ -0.1
PTPN12-216ENST00000523952 KIF1BO60333 1816 aa14.45□□□□□ -0.1
PTPN12-216ENST00000523952 MST1RQ04912 1400 aa14.43□□□□□ -0.1
PTPN12-216ENST00000523952 ZRANB1Q9UGI0 708 aa14.43□□□□□ -0.1
PTPN12-216ENST00000523952 NRXN3Q9Y4C0 1643 aa14.43□□□□□ -0.1
PTPN12-216ENST00000523952 LOC105371045A0A1W2PR82 267 aa14.42□□□□□ -0.1
PTPN12-216ENST00000523952 ADAMTS2O95450 1211 aa14.42□□□□□ -0.1
PTPN12-216ENST00000523952 PTPRUQ92729 1446 aa14.41□□□□□ -0.1
PTPN12-216ENST00000523952 PNPLA6Q8IY17 1366 aa14.41□□□□□ -0.1
PTPN12-216ENST00000523952 SETBP1Q9Y6X0 1596 aa14.41□□□□□ -0.1
PTPN12-216ENST00000523952 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
PTPN12-216ENST00000523952 ZNF326Q5BKZ1 582 aaKnown RBP14.39□□□□□ -0.11
PTPN12-216ENST00000523952 DDX17Q92841 729 aaKnown RBP14.39□□□□□ -0.11
PTPN12-216ENST00000523952 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
PTPN12-216ENST00000523952 USP21Q9UK80 565 aa14.38□□□□□ -0.11
PTPN12-216ENST00000523952 ADGRL3Q9HAR2 1447 aa14.38□□□□□ -0.11
PTPN12-216ENST00000523952 LAMC1P11047 1609 aa14.37□□□□□ -0.11
PTPN12-216ENST00000523952 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
PTPN12-216ENST00000523952 COL22A1Q8NFW1 1626 aaPredicted RBP14.35□□□□□ -0.11
PTPN12-216ENST00000523952 BRWD3Q6RI45 1802 aa14.35□□□□□ -0.11
PTPN12-216ENST00000523952 SRCAPQ6ZRS2 3230 aa14.35□□□□□ -0.11
PTPN12-216ENST00000523952 PTCH1Q13635 1447 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms