RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 RCCD1A6NED2 376 aa10.73□□□□□ -0.69
LINC00534-203ENST00000523406 SSTR3P32745 418 aaPredicted RBP10.73□□□□□ -0.69
LINC00534-203ENST00000523406 POTEBQ6S5H4 581 aa10.73□□□□□ -0.69
LINC00534-203ENST00000523406 AXIN2Q9Y2T1 843 aa10.73□□□□□ -0.69
LINC00534-203ENST00000523406 DMRTA1Q5VZB9 504 aa10.72□□□□□ -0.69
LINC00534-203ENST00000523406 HS3ST6Q96QI5 342 aa10.71□□□□□ -0.69
LINC00534-203ENST00000523406 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.69
LINC00534-203ENST00000523406 SMAPO00193 183 aa10.69□□□□□ -0.7
LINC00534-203ENST00000523406 DNAJB2P25686 324 aa10.69□□□□□ -0.7
LINC00534-203ENST00000523406 RABGEF1Q9UJ41 708 aa10.69□□□□□ -0.7
LINC00534-203ENST00000523406 TMEM134Q9H6X4 195 aa10.68□□□□□ -0.7
LINC00534-203ENST00000523406 GOPCQ9HD26 462 aa10.67□□□□□ -0.7
LINC00534-203ENST00000523406 VPS9D1Q9Y2B5 631 aa10.67□□□□□ -0.7
LINC00534-203ENST00000523406 TOP2AP11388 1531 aaKnown RBP10.67□□□□□ -0.7
LINC00534-203ENST00000523406 BEGAINQ9BUH8 593 aa10.66□□□□□ -0.7
LINC00534-203ENST00000523406 TK2O00142 265 aa10.62□□□□□ -0.71
LINC00534-203ENST00000523406 CD46P15529 392 aa10.62□□□□□ -0.71
LINC00534-203ENST00000523406 SH3D19Q5HYK7 790 aa10.62□□□□□ -0.71
LINC00534-203ENST00000523406 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
LINC00534-203ENST00000523406 BHMG1C9JSJ3 638 aaPredicted RBP10.61□□□□□ -0.71
LINC00534-203ENST00000523406 SULF1Q8IWU6 871 aa10.61□□□□□ -0.71
LINC00534-203ENST00000523406 SEPT9Q9UHD8 586 aaPredicted RBP10.61□□□□□ -0.71
LINC00534-203ENST00000523406 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
LINC00534-203ENST00000523406 FAM98CQ17RN3 349 aaKnown RBP10.6□□□□□ -0.71
LINC00534-203ENST00000523406 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
LINC00534-203ENST00000523406 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
LINC00534-203ENST00000523406 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
LINC00534-203ENST00000523406 TIMELESSQ9UNS1 1208 aa10.59□□□□□ -0.71
LINC00534-203ENST00000523406 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
LINC00534-203ENST00000523406 BAZ1BQ9UIG0 1483 aaKnown RBP10.58□□□□□ -0.72
LINC00534-203ENST00000523406 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC00534-203ENST00000523406 LAPTM4BQ86VI4 370 aa10.58□□□□□ -0.72
LINC00534-203ENST00000523406 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
LINC00534-203ENST00000523406 SWT1Q5T5J6 900 aaKnown RBP10.57□□□□□ -0.72
LINC00534-203ENST00000523406 TBC1D2Q9BYX2 928 aa10.57□□□□□ -0.72
LINC00534-203ENST00000523406 NBPF3Q9H094 633 aa10.57□□□□□ -0.72
LINC00534-203ENST00000523406 MYSM1Q5VVJ2 828 aa10.56□□□□□ -0.72
LINC00534-203ENST00000523406 ADGRD1Q6QNK2 874 aa10.56□□□□□ -0.72
LINC00534-203ENST00000523406 ERICH6Q7L0X2 663 aa10.56□□□□□ -0.72
LINC00534-203ENST00000523406 PCMTD1Q96MG8 357 aaPredicted RBP10.56□□□□□ -0.72
LINC00534-203ENST00000523406 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
LINC00534-203ENST00000523406 HRO43593 1189 aa10.55□□□□□ -0.72
LINC00534-203ENST00000523406 DIXDC1Q155Q3 683 aa10.55□□□□□ -0.72
LINC00534-203ENST00000523406 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
LINC00534-203ENST00000523406 SLC10A3P09131 477 aa10.53□□□□□ -0.72
LINC00534-203ENST00000523406 RDH13Q8NBN7 331 aa10.53□□□□□ -0.72
LINC00534-203ENST00000523406 SAMD7Q7Z3H4 446 aa10.52□□□□□ -0.73
LINC00534-203ENST00000523406 POLR3EQ9NVU0 708 aa10.52□□□□□ -0.73
LINC00534-203ENST00000523406 GCGRP47871 477 aa10.51□□□□□ -0.73
LINC00534-203ENST00000523406 HDGFP51858 240 aaKnown RBP10.51□□□□□ -0.73
LINC00534-203ENST00000523406 RSPH4AQ5TD94 716 aa10.51□□□□□ -0.73
LINC00534-203ENST00000523406 MRPL50Q8N5N7 158 aaKnown RBP10.51□□□□□ -0.73
LINC00534-203ENST00000523406 PROCA1Q8NCQ7 364 aaPredicted RBP10.51□□□□□ -0.73
LINC00534-203ENST00000523406 ZFRQ96KR1 1074 aaKnown RBP10.51□□□□□ -0.73
LINC00534-203ENST00000523406 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINC00534-203ENST00000523406 NCAPD3P42695 1498 aa10.5□□□□□ -0.73
LINC00534-203ENST00000523406 CLK2P49760 499 aaKnown RBP10.5□□□□□ -0.73
LINC00534-203ENST00000523406 NUTM1Q86Y26 1132 aa10.5□□□□□ -0.73
LINC00534-203ENST00000523406 SLF2Q8IX21 1173 aa10.5□□□□□ -0.73
LINC00534-203ENST00000523406 ANKRD13DQ6ZTN6 518 aa10.48□□□□□ -0.73
LINC00534-203ENST00000523406 C14orf37Q86TY3 774 aa10.48□□□□□ -0.73
LINC00534-203ENST00000523406 LIMD1Q9UGP4 676 aa10.48□□□□□ -0.73
LINC00534-203ENST00000523406 SPTLC1O15269 473 aa10.47□□□□□ -0.73
LINC00534-203ENST00000523406 KDM4AO75164 1064 aa10.47□□□□□ -0.73
LINC00534-203ENST00000523406 TUSC1Q2TAM9 212 aa10.47□□□□□ -0.73
LINC00534-203ENST00000523406 RIC3Q7Z5B4 369 aa10.47□□□□□ -0.73
LINC00534-203ENST00000523406 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
LINC00534-203ENST00000523406 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
LINC00534-203ENST00000523406 MOXD2PA6NHM9 499 aa10.46□□□□□ -0.73
LINC00534-203ENST00000523406 GJA5P36382 358 aa10.46□□□□□ -0.73
LINC00534-203ENST00000523406 SLC4A3P48751 1232 aa10.46□□□□□ -0.73
LINC00534-203ENST00000523406 USP46P62068 366 aa10.46□□□□□ -0.73
LINC00534-203ENST00000523406 RSBN1LQ6PCB5 846 aaPredicted RBP10.46□□□□□ -0.73
LINC00534-203ENST00000523406 HMGXB3Q12766 1538 aa10.46□□□□□ -0.74
LINC00534-203ENST00000523406 NDUFV2P19404 249 aa10.44□□□□□ -0.74
LINC00534-203ENST00000523406 HOXA2O43364 376 aa10.43□□□□□ -0.74
LINC00534-203ENST00000523406 FBXO31Q5XUX0 539 aaPredicted RBP10.43□□□□□ -0.74
LINC00534-203ENST00000523406 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
LINC00534-203ENST00000523406 LRCH3Q96II8 777 aa10.43□□□□□ -0.74
LINC00534-203ENST00000523406 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.43□□□□□ -0.74
LINC00534-203ENST00000523406 CFHP08603 1231 aa10.42□□□□□ -0.74
LINC00534-203ENST00000523406 LOC105371045A0A1W2PR82 267 aa10.41□□□□□ -0.74
LINC00534-203ENST00000523406 PPP2R2DQ66LE6 453 aa10.41□□□□□ -0.74
LINC00534-203ENST00000523406 ANKK1Q8NFD2 765 aa10.41□□□□□ -0.74
LINC00534-203ENST00000523406 STAC3Q96MF2 364 aa10.41□□□□□ -0.74
LINC00534-203ENST00000523406 RNF40O75150 1001 aa10.4□□□□□ -0.74
LINC00534-203ENST00000523406 FLIIQ13045 1269 aa10.4□□□□□ -0.74
LINC00534-203ENST00000523406 NECTIN2Q92692 538 aa10.4□□□□□ -0.74
LINC00534-203ENST00000523406 ATP1B4Q9UN42 357 aaPredicted RBP10.4□□□□□ -0.74
LINC00534-203ENST00000523406 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
LINC00534-203ENST00000523406 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
LINC00534-203ENST00000523406 GOLGA8CPA6NN73 597 aa10.39□□□□□ -0.75
LINC00534-203ENST00000523406 CC2D2AQ9P2K1 1620 aa10.38□□□□□ -0.75
LINC00534-203ENST00000523406 LILRB3O75022 631 aa10.38□□□□□ -0.75
LINC00534-203ENST00000523406 RFC5P40937 340 aa10.38□□□□□ -0.75
LINC00534-203ENST00000523406 FUT2Q10981 343 aa10.38□□□□□ -0.75
LINC00534-203ENST00000523406 QPCTQ16769 361 aa10.38□□□□□ -0.75
LINC00534-203ENST00000523406 HLA-CQ95604 372 aa10.38□□□□□ -0.75
LINC00534-203ENST00000523406 PCDHGC3Q9UN70 934 aa10.38□□□□□ -0.75
LINC00534-203ENST00000523406 FDX1P10109 184 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms