RNA–Protein interactions for RNA: ENST00000523208.5

CD74-209, Transcript of CD74 molecule, humanhuman

TSL 5

Gene CD74, Length 767 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-209ENST00000523208 RIMS2Q9UQ26 1411 aa16.93■□□□□ 0.3
CD74-209ENST00000523208 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.3
CD74-209ENST00000523208 MYOM2P54296 1465 aa16.89■□□□□ 0.29
CD74-209ENST00000523208 DIP2AQ14689 1571 aa16.89■□□□□ 0.29
CD74-209ENST00000523208 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
CD74-209ENST00000523208 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
CD74-209ENST00000523208 SETBP1Q9Y6X0 1596 aa16.88■□□□□ 0.29
CD74-209ENST00000523208 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
CD74-209ENST00000523208 NPHP4O75161 1426 aaPredicted RBP16.85■□□□□ 0.29
CD74-209ENST00000523208 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
CD74-209ENST00000523208 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
CD74-209ENST00000523208 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
CD74-209ENST00000523208 PPP1R15AO75807 674 aaPredicted RBP16.83■□□□□ 0.28
CD74-209ENST00000523208 NUTM2DQ5VT03 806 aaPredicted RBP16.83■□□□□ 0.28
CD74-209ENST00000523208 KNDC1Q76NI1 1749 aa16.83■□□□□ 0.28
CD74-209ENST00000523208 THEMISQ8N1K5 641 aaPredicted RBP16.83■□□□□ 0.28
CD74-209ENST00000523208 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
CD74-209ENST00000523208 ASXL1Q8IXJ9 1541 aa16.82■□□□□ 0.28
CD74-209ENST00000523208 MED14O60244 1454 aa16.82■□□□□ 0.28
CD74-209ENST00000523208 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
CD74-209ENST00000523208 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
CD74-209ENST00000523208 RGL3Q3MIN7 710 aa16.82■□□□□ 0.28
CD74-209ENST00000523208 CHD2O14647 1828 aaKnown RBP16.82■□□□□ 0.28
CD74-209ENST00000523208 NCKAP5LQ9HCH0 1330 aa16.81■□□□□ 0.28
CD74-209ENST00000523208 XRN1Q8IZH2 1706 aaKnown RBP16.81■□□□□ 0.28
CD74-209ENST00000523208 NWD1Q149M9 1564 aa16.81■□□□□ 0.28
CD74-209ENST00000523208 ALKQ9UM73 1620 aa16.8■□□□□ 0.28
CD74-209ENST00000523208 NRXN1Q9ULB1 1477 aa16.8■□□□□ 0.28
CD74-209ENST00000523208 PIK3C2GO75747 1445 aa16.79■□□□□ 0.28
CD74-209ENST00000523208 PLEKHG1Q9ULL1 1385 aa16.79■□□□□ 0.28
CD74-209ENST00000523208 EID1Q9Y6B2 187 aa16.78■□□□□ 0.28
CD74-209ENST00000523208 ARHGEF28Q8N1W1 1705 aaKnown RBP16.78■□□□□ 0.28
CD74-209ENST00000523208 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.28
CD74-209ENST00000523208 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
CD74-209ENST00000523208 LTKP29376 864 aa16.76■□□□□ 0.27
CD74-209ENST00000523208 ANKLE2Q86XL3 938 aa16.76■□□□□ 0.27
CD74-209ENST00000523208 ADAMTS13Q76LX8 1427 aa16.76■□□□□ 0.27
CD74-209ENST00000523208 XIRP1Q702N8 1843 aaKnown RBP16.75■□□□□ 0.27
CD74-209ENST00000523208 PRAG1Q86YV5 1406 aa16.74■□□□□ 0.27
CD74-209ENST00000523208 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.74■□□□□ 0.27
CD74-209ENST00000523208 BCANQ96GW7 911 aa16.74■□□□□ 0.27
CD74-209ENST00000523208 RPGRIP1LQ68CZ1 1315 aa16.73■□□□□ 0.27
CD74-209ENST00000523208 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
CD74-209ENST00000523208 ADGRF5Q8IZF2 1346 aa16.72■□□□□ 0.27
CD74-209ENST00000523208 CPS1P31327 1500 aa16.71■□□□□ 0.27
CD74-209ENST00000523208 DCAF11Q8TEB1 546 aa16.71■□□□□ 0.27
CD74-209ENST00000523208 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
CD74-209ENST00000523208 ADGRB1O14514 1584 aa16.71■□□□□ 0.27
CD74-209ENST00000523208 QRICH2Q9H0J4 1663 aa16.7■□□□□ 0.26
CD74-209ENST00000523208 RALGAPBQ86X10 1494 aa16.69■□□□□ 0.26
CD74-209ENST00000523208 HDGFP51858 240 aaKnown RBP16.69■□□□□ 0.26
CD74-209ENST00000523208 L3MBTL2Q969R5 705 aa16.69■□□□□ 0.26
CD74-209ENST00000523208 NKTRP30414 1462 aaKnown RBP16.68■□□□□ 0.26
CD74-209ENST00000523208 VGFO15240 615 aaPredicted RBP16.67■□□□□ 0.26
CD74-209ENST00000523208 SLC26A8Q96RN1 970 aa16.67■□□□□ 0.26
CD74-209ENST00000523208 LTBP4Q8N2S1 1624 aa16.66■□□□□ 0.26
CD74-209ENST00000523208 PTPRUQ92729 1446 aa16.64■□□□□ 0.25
CD74-209ENST00000523208 ZNF335Q9H4Z2 1342 aaPredicted RBP16.63■□□□□ 0.25
CD74-209ENST00000523208 METP08581 1390 aa16.63■□□□□ 0.25
CD74-209ENST00000523208 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
CD74-209ENST00000523208 YTHDC2Q9H6S0 1430 aaKnown RBP16.61■□□□□ 0.25
CD74-209ENST00000523208 DLC1Q96QB1 1528 aa16.6■□□□□ 0.25
CD74-209ENST00000523208 CFAP70Q5T0N1 1121 aa16.6■□□□□ 0.25
CD74-209ENST00000523208 PIK3R4Q99570 1358 aa16.6■□□□□ 0.25
CD74-209ENST00000523208 PTCH1Q13635 1447 aa16.6■□□□□ 0.25
CD74-209ENST00000523208 ROCK2O75116 1388 aaKnown RBP16.59■□□□□ 0.25
CD74-209ENST00000523208 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.59■□□□□ 0.25
CD74-209ENST00000523208 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
CD74-209ENST00000523208 ADGRB2O60241 1585 aa16.57■□□□□ 0.24
CD74-209ENST00000523208 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
CD74-209ENST00000523208 TECPR2O15040 1411 aa16.57■□□□□ 0.24
CD74-209ENST00000523208 NBPF8Q3BBV2 869 aa16.57■□□□□ 0.24
CD74-209ENST00000523208 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
CD74-209ENST00000523208 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
CD74-209ENST00000523208 TMEM132EQ6IEE7 984 aa16.55■□□□□ 0.24
CD74-209ENST00000523208 STAC3Q96MF2 364 aa16.55■□□□□ 0.24
CD74-209ENST00000523208 RGPD8O14715 1765 aaPredicted RBP16.55■□□□□ 0.24
CD74-209ENST00000523208 ITSN1Q15811 1721 aa16.55■□□□□ 0.24
CD74-209ENST00000523208 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
CD74-209ENST00000523208 C14orf93Q9H972 538 aaKnown RBP16.54■□□□□ 0.24
CD74-209ENST00000523208 GPRASP1Q5JY77 1395 aa16.52■□□□□ 0.24
CD74-209ENST00000523208 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.24
CD74-209ENST00000523208 KCNA6P17658 529 aa16.52■□□□□ 0.24
CD74-209ENST00000523208 STK26Q9P289 416 aa16.52■□□□□ 0.24
CD74-209ENST00000523208 TIMELESSQ9UNS1 1208 aa16.51■□□□□ 0.23
CD74-209ENST00000523208 NBPF1Q3BBV0 1214 aa16.5■□□□□ 0.23
CD74-209ENST00000523208 AMOTL2Q9Y2J4 779 aa16.5■□□□□ 0.23
CD74-209ENST00000523208 ADGRL3Q9HAR2 1447 aa16.5■□□□□ 0.23
CD74-209ENST00000523208 TMEM94Q12767 1356 aa16.5■□□□□ 0.23
CD74-209ENST00000523208 PLEKHH1Q9ULM0 1364 aa16.5■□□□□ 0.23
CD74-209ENST00000523208 TOPAZ1Q8N9V7 1692 aa16.5■□□□□ 0.23
CD74-209ENST00000523208 EIF3AQ14152 1382 aaKnown RBP16.49■□□□□ 0.23
CD74-209ENST00000523208 FAM135BQ49AJ0 1406 aa16.48■□□□□ 0.23
CD74-209ENST00000523208 USP32Q8NFA0 1604 aa16.48■□□□□ 0.23
CD74-209ENST00000523208 IQSEC2Q5JU85 1478 aa16.48■□□□□ 0.23
CD74-209ENST00000523208 TULP4Q9NRJ4 1543 aa16.47■□□□□ 0.23
CD74-209ENST00000523208 RBM33Q96EV2 1170 aaKnown RBP16.47■□□□□ 0.23
CD74-209ENST00000523208 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
CD74-209ENST00000523208 ABCC11Q96J66 1382 aa16.47■□□□□ 0.23
CD74-209ENST00000523208 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms