RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 JPH4Q96JJ6 628 aa10.27□□□□□ -0.77
CSMD1-211ENST00000523062 BCL2L12Q9HB09 334 aa10.27□□□□□ -0.77
CSMD1-211ENST00000523062 GPHNQ9NQX3 736 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-211ENST00000523062 SUPT6HQ7KZ85 1726 aaKnown RBP10.27□□□□□ -0.77
CSMD1-211ENST00000523062 DSG2Q14126 1118 aa10.26□□□□□ -0.77
CSMD1-211ENST00000523062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.26□□□□□ -0.77
CSMD1-211ENST00000523062 NCOA2Q15596 1464 aa10.25□□□□□ -0.77
CSMD1-211ENST00000523062 FGD6Q6ZV73 1430 aa10.24□□□□□ -0.77
CSMD1-211ENST00000523062 NUP153P49790 1475 aaKnown RBP10.24□□□□□ -0.77
CSMD1-211ENST00000523062 CDK13Q14004 1512 aaKnown RBP10.24□□□□□ -0.77
CSMD1-211ENST00000523062 ARHGEF11O15085 1522 aa10.23□□□□□ -0.77
CSMD1-211ENST00000523062 MAGI3Q5TCQ9 1506 aa10.23□□□□□ -0.77
CSMD1-211ENST00000523062 PTPREP23469 700 aa10.23□□□□□ -0.77
CSMD1-211ENST00000523062 ZNF454Q8N9F8 522 aa10.23□□□□□ -0.77
CSMD1-211ENST00000523062 MYOM3Q5VTT5 1437 aa10.23□□□□□ -0.77
CSMD1-211ENST00000523062 ECM2O94769 699 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-211ENST00000523062 LAPTM4AQ15012 233 aa10.22□□□□□ -0.77
CSMD1-211ENST00000523062 ZBED2Q9BTP6 218 aa10.22□□□□□ -0.77
CSMD1-211ENST00000523062 NBPF3Q9H094 633 aa10.22□□□□□ -0.77
CSMD1-211ENST00000523062 PRG4Q92954 1404 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-211ENST00000523062 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
CSMD1-211ENST00000523062 RGL2O15211 777 aa10.21□□□□□ -0.77
CSMD1-211ENST00000523062 ITGBL1O95965 494 aaPredicted RBP10.21□□□□□ -0.77
CSMD1-211ENST00000523062 ABCA8O94911 1581 aa10.2□□□□□ -0.78
CSMD1-211ENST00000523062 FAM50AQ14320 339 aaKnown RBP10.2□□□□□ -0.78
CSMD1-211ENST00000523062 PLB1Q6P1J6 1458 aa10.2□□□□□ -0.78
CSMD1-211ENST00000523062 OXER1Q8TDS5 423 aa10.2□□□□□ -0.78
CSMD1-211ENST00000523062 CDK11AQ9UQ88 783 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-211ENST00000523062 CLASP1Q7Z460 1538 aa10.18□□□□□ -0.78
CSMD1-211ENST00000523062 TCOF1Q13428 1488 aaKnown RBP10.17□□□□□ -0.78
CSMD1-211ENST00000523062 PTPRGP23470 1445 aa10.17□□□□□ -0.78
CSMD1-211ENST00000523062 TROQ12816 1431 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-211ENST00000523062 MIA2Q96PC5 1412 aa10.17□□□□□ -0.78
CSMD1-211ENST00000523062 ITGAEP38570 1179 aa10.17□□□□□ -0.78
CSMD1-211ENST00000523062 PTPN23Q9H3S7 1636 aa10.17□□□□□ -0.78
CSMD1-211ENST00000523062 CLSPNQ9HAW4 1339 aa10.16□□□□□ -0.78
CSMD1-211ENST00000523062 ARID3CA6NKF2 412 aa10.16□□□□□ -0.78
CSMD1-211ENST00000523062 FOSBP53539 338 aa10.16□□□□□ -0.78
CSMD1-211ENST00000523062 SETD5Q9C0A6 1442 aa10.16□□□□□ -0.78
CSMD1-211ENST00000523062 ADCY10Q96PN6 1610 aa10.15□□□□□ -0.79
CSMD1-211ENST00000523062 DHX57Q6P158 1386 aaKnown RBP10.14□□□□□ -0.79
CSMD1-211ENST00000523062 PKD2Q13563 968 aa10.14□□□□□ -0.79
CSMD1-211ENST00000523062 TRAF7Q6Q0C0 670 aa10.14□□□□□ -0.79
CSMD1-211ENST00000523062 RAB3GAP2Q9H2M9 1393 aa10.14□□□□□ -0.79
CSMD1-211ENST00000523062 NYAP1Q6ZVC0 841 aa10.13□□□□□ -0.79
CSMD1-211ENST00000523062 ATP10BO94823 1461 aa10.12□□□□□ -0.79
CSMD1-211ENST00000523062 ANKK1Q8NFD2 765 aa10.12□□□□□ -0.79
CSMD1-211ENST00000523062 UPF1Q92900 1129 aaKnown RBP eCLIP10.12□□□□□ -0.79
CSMD1-211ENST00000523062 UACAQ9BZF9 1416 aa10.12□□□□□ -0.79
CSMD1-211ENST00000523062 ANO8Q9HCE9 1232 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-211ENST00000523062 ITSN2Q9NZM3 1697 aa10.11□□□□□ -0.79
CSMD1-211ENST00000523062 KIF14Q15058 1648 aa10.11□□□□□ -0.79
CSMD1-211ENST00000523062 ERCC6L2Q5T890 1561 aa10.1□□□□□ -0.79
CSMD1-211ENST00000523062 HFM1A2PYH4 1435 aa10.1□□□□□ -0.79
CSMD1-211ENST00000523062 AKNAQ7Z591 1439 aa10.1□□□□□ -0.79
CSMD1-211ENST00000523062 KCNC4Q03721 635 aa10.1□□□□□ -0.79
CSMD1-211ENST00000523062 ABCC2Q92887 1545 aa10.1□□□□□ -0.79
CSMD1-211ENST00000523062 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
CSMD1-211ENST00000523062 PTPRKQ15262 1439 aa10.08□□□□□ -0.8
CSMD1-211ENST00000523062 ZDHHC16Q969W1 377 aa10.08□□□□□ -0.8
CSMD1-211ENST00000523062 UHRF1BP1LA0JNW5 1464 aa10.07□□□□□ -0.8
CSMD1-211ENST00000523062 ABCC10Q5T3U5 1492 aa10.07□□□□□ -0.8
CSMD1-211ENST00000523062 GFRA3O60609 400 aa10.07□□□□□ -0.8
CSMD1-211ENST00000523062 ADAM33Q9BZ11 813 aa10.07□□□□□ -0.8
CSMD1-211ENST00000523062 RABGEF1Q9UJ41 708 aa10.07□□□□□ -0.8
CSMD1-211ENST00000523062 GPATCH8Q9UKJ3 1502 aaKnown RBP10.07□□□□□ -0.8
CSMD1-211ENST00000523062 DNMT1P26358 1616 aaKnown RBP10.06□□□□□ -0.8
CSMD1-211ENST00000523062 NAIPQ13075 1403 aa10.06□□□□□ -0.8
CSMD1-211ENST00000523062 CAMSAP2Q08AD1 1489 aa10.05□□□□□ -0.8
CSMD1-211ENST00000523062 LCE2BO14633 110 aa10.05□□□□□ -0.8
CSMD1-211ENST00000523062 CRISPLD2Q9H0B8 497 aa10.05□□□□□ -0.8
CSMD1-211ENST00000523062 DAPK1P53355 1430 aa10.05□□□□□ -0.8
CSMD1-211ENST00000523062 MAPKBP1O60336 1514 aa10.04□□□□□ -0.8
CSMD1-211ENST00000523062 GCC2Q8IWJ2 1684 aa10.04□□□□□ -0.8
CSMD1-211ENST00000523062 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
CSMD1-211ENST00000523062 LAPTM4BQ86VI4 370 aa10.04□□□□□ -0.8
CSMD1-211ENST00000523062 CFDP1Q9UEE9 299 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-211ENST00000523062 ROCK1Q13464 1354 aa10.03□□□□□ -0.8
CSMD1-211ENST00000523062 ABCC5O15440 1437 aa10.03□□□□□ -0.8
CSMD1-211ENST00000523062 BCAMP50895 628 aa10.02□□□□□ -0.81
CSMD1-211ENST00000523062 KDM5BQ9UGL1 1544 aa10.02□□□□□ -0.81
CSMD1-211ENST00000523062 CDC42BPAQ5VT25 1732 aa10.02□□□□□ -0.81
CSMD1-211ENST00000523062 PPP1R3GB7ZBB8 358 aa10.01□□□□□ -0.81
CSMD1-211ENST00000523062 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
CSMD1-211ENST00000523062 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
CSMD1-211ENST00000523062 EVI5O60447 810 aa10□□□□□ -0.81
CSMD1-211ENST00000523062 ZNF644Q9H582 1327 aaPredicted RBP10□□□□□ -0.81
CSMD1-211ENST00000523062 ZCCHC11Q5TAX3 1644 aaKnown RBP10□□□□□ -0.81
CSMD1-211ENST00000523062 PREX2Q70Z35 1606 aa10□□□□□ -0.81
CSMD1-211ENST00000523062 ADGRL2O95490 1459 aa9.99□□□□□ -0.81
CSMD1-211ENST00000523062 SHANK2Q9UPX8 1470 aa9.99□□□□□ -0.81
CSMD1-211ENST00000523062 HS6ST3Q8IZP7 471 aa9.99□□□□□ -0.81
CSMD1-211ENST00000523062 RRP7BPQ9NSQ0 103 aa9.99□□□□□ -0.81
CSMD1-211ENST00000523062 CHIC2Q9UKJ5 165 aa9.99□□□□□ -0.81
CSMD1-211ENST00000523062 CROCC2H7BZ55 1655 aa9.99□□□□□ -0.81
CSMD1-211ENST00000523062 PROX2Q3B8N5 592 aa9.98□□□□□ -0.81
CSMD1-211ENST00000523062 WBP1LQ9NX94 342 aa9.98□□□□□ -0.81
CSMD1-211ENST00000523062 ADGBQ8N7X0 1667 aa9.98□□□□□ -0.81
CSMD1-211ENST00000523062 TTC37Q6PGP7 1564 aa9.97□□□□□ -0.81
CSMD1-211ENST00000523062 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms