RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 LRP6O75581 1613 aa23.24■■□□□ 1.31
PCM1-218ENST00000523055 LMTK2Q8IWU2 1503 aa23.24■■□□□ 1.31
PCM1-218ENST00000523055 COL16A1Q07092 1604 aaPredicted RBP23.24■■□□□ 1.31
PCM1-218ENST00000523055 UPF1Q92900 1129 aaKnown RBP eCLIP23.24■■□□□ 1.31
PCM1-218ENST00000523055 ADGRL2O95490 1459 aa23.23■■□□□ 1.31
PCM1-218ENST00000523055 NOS1P29475 1434 aa23.23■■□□□ 1.31
PCM1-218ENST00000523055 MSH6P52701 1360 aa23.23■■□□□ 1.31
PCM1-218ENST00000523055 ANKRD30AQ9BXX3 1397 aa23.21■■□□□ 1.31
PCM1-218ENST00000523055 ADGRB3O60242 1522 aa23.2■■□□□ 1.3
PCM1-218ENST00000523055 SRCAPQ6ZRS2 3230 aa23.18■■□□□ 1.3
PCM1-218ENST00000523055 KANK1Q14678 1352 aa23.16■■□□□ 1.3
PCM1-218ENST00000523055 ZFYVE9O95405 1425 aa23.16■■□□□ 1.3
PCM1-218ENST00000523055 CHD2O14647 1828 aaKnown RBP23.16■■□□□ 1.3
PCM1-218ENST00000523055 SPATA31A6Q5VVP1 1343 aa23.14■■□□□ 1.3
PCM1-218ENST00000523055 PLEKHG1Q9ULL1 1385 aa23.12■■□□□ 1.29
PCM1-218ENST00000523055 SLC52A1Q9NWF4 448 aa23.12■■□□□ 1.29
PCM1-218ENST00000523055 ZNF772Q68DY9 489 aaPredicted RBP23.11■■□□□ 1.29
PCM1-218ENST00000523055 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
PCM1-218ENST00000523055 NCOA3Q9Y6Q9 1424 aa23.1■■□□□ 1.29
PCM1-218ENST00000523055 ITGAEP38570 1179 aa23.1■■□□□ 1.29
PCM1-218ENST00000523055 AHDC1Q5TGY3 1603 aaPredicted RBP23.1■■□□□ 1.29
PCM1-218ENST00000523055 RRBP1Q9P2E9 1410 aaKnown RBP23.09■■□□□ 1.29
PCM1-218ENST00000523055 ANKRD50Q9ULJ7 1429 aa23.09■■□□□ 1.29
PCM1-218ENST00000523055 BCANQ96GW7 911 aa23.08■■□□□ 1.29
PCM1-218ENST00000523055 SHPRHQ149N8 1683 aa23.07■■□□□ 1.28
PCM1-218ENST00000523055 MYO5BQ9ULV0 1848 aa23.07■■□□□ 1.28
PCM1-218ENST00000523055 TBX22Q9Y458 520 aa23.07■■□□□ 1.28
PCM1-218ENST00000523055 RIMS2Q9UQ26 1411 aa23.06■■□□□ 1.28
PCM1-218ENST00000523055 MEX3CQ5U5Q3 659 aaKnown RBP23.05■■□□□ 1.28
PCM1-218ENST00000523055 ADAMTS13Q76LX8 1427 aa23.05■■□□□ 1.28
PCM1-218ENST00000523055 UNC13BO14795 1591 aa23.05■■□□□ 1.28
PCM1-218ENST00000523055 DIP2AQ14689 1571 aa23.05■■□□□ 1.28
PCM1-218ENST00000523055 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.05■■□□□ 1.28
PCM1-218ENST00000523055 ROCK1Q13464 1354 aa23.04■■□□□ 1.28
PCM1-218ENST00000523055 TMEM131LA2VDJ0 1609 aa23.03■■□□□ 1.28
PCM1-218ENST00000523055 CDK12Q9NYV4 1490 aaPredicted RBP23.03■■□□□ 1.28
PCM1-218ENST00000523055 RXRBP28702 533 aa23.03■■□□□ 1.28
PCM1-218ENST00000523055 RPRD2Q5VT52 1461 aaKnown RBP23.02■■□□□ 1.28
PCM1-218ENST00000523055 CADPS2Q86UW7 1296 aa23.01■■□□□ 1.27
PCM1-218ENST00000523055 C19orf44Q9H6X5 657 aa23.01■■□□□ 1.27
PCM1-218ENST00000523055 GCC2Q8IWJ2 1684 aa23.01■■□□□ 1.27
PCM1-218ENST00000523055 BRINP3Q76B58 766 aa22.99■■□□□ 1.27
PCM1-218ENST00000523055 PPP1R15AO75807 674 aaPredicted RBP22.98■■□□□ 1.27
PCM1-218ENST00000523055 C14orf37Q86TY3 774 aa22.97■■□□□ 1.27
PCM1-218ENST00000523055 PIK3R4Q99570 1358 aa22.96■■□□□ 1.27
PCM1-218ENST00000523055 IQGAP3Q86VI3 1631 aa22.96■■□□□ 1.27
PCM1-218ENST00000523055 AFF2P51816 1311 aa22.95■■□□□ 1.27
PCM1-218ENST00000523055 PTPRUQ92729 1446 aa22.95■■□□□ 1.26
PCM1-218ENST00000523055 ATF3P18847 181 aa22.95■■□□□ 1.26
PCM1-218ENST00000523055 HDGFP51858 240 aaKnown RBP22.95■■□□□ 1.26
PCM1-218ENST00000523055 NUTM2BA6NNL0 878 aaPredicted RBP22.94■■□□□ 1.26
PCM1-218ENST00000523055 NUTM2EB1AL46 878 aaPredicted RBP22.94■■□□□ 1.26
PCM1-218ENST00000523055 NUTM2DQ5VT03 806 aaPredicted RBP22.94■■□□□ 1.26
PCM1-218ENST00000523055 NUTM2AQ8IVF1 878 aaPredicted RBP22.94■■□□□ 1.26
PCM1-218ENST00000523055 E9PCH4 1651 aa22.94■■□□□ 1.26
PCM1-218ENST00000523055 RGS12O14924 1447 aa22.93■■□□□ 1.26
PCM1-218ENST00000523055 SETD5Q9C0A6 1442 aa22.93■■□□□ 1.26
PCM1-218ENST00000523055 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.91■■□□□ 1.26
PCM1-218ENST00000523055 ASXL1Q8IXJ9 1541 aa22.91■■□□□ 1.26
PCM1-218ENST00000523055 AMOTL2Q9Y2J4 779 aa22.9■■□□□ 1.26
PCM1-218ENST00000523055 DCCP43146 1447 aa22.89■■□□□ 1.25
PCM1-218ENST00000523055 MST1RQ04912 1400 aa22.87■■□□□ 1.25
PCM1-218ENST00000523055 NAIPQ13075 1403 aa22.87■■□□□ 1.25
PCM1-218ENST00000523055 NHSL1Q5SYE7 1610 aa22.86■■□□□ 1.25
PCM1-218ENST00000523055 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
PCM1-218ENST00000523055 TRPM2O94759 1503 aa22.85■■□□□ 1.25
PCM1-218ENST00000523055 QTRT2Q9H974 415 aaKnown RBP22.84■■□□□ 1.25
PCM1-218ENST00000523055 RBM6P78332 1123 aaKnown RBP22.83■■□□□ 1.25
PCM1-218ENST00000523055 NUP155O75694 1391 aa22.83■■□□□ 1.25
PCM1-218ENST00000523055 PNPLA6Q8IY17 1366 aa22.83■■□□□ 1.25
PCM1-218ENST00000523055 XRN1Q8IZH2 1706 aaKnown RBP22.83■■□□□ 1.25
PCM1-218ENST00000523055 DDX17Q92841 729 aaKnown RBP22.82■■□□□ 1.24
PCM1-218ENST00000523055 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
PCM1-218ENST00000523055 LRRC59Q96AG4 307 aaKnown RBP22.82■■□□□ 1.24
PCM1-218ENST00000523055 C8orf37Q96NL8 207 aa22.82■■□□□ 1.24
PCM1-218ENST00000523055 HFM1A2PYH4 1435 aa22.8■■□□□ 1.24
PCM1-218ENST00000523055 SPHKAPQ2M3C7 1700 aa22.79■■□□□ 1.24
PCM1-218ENST00000523055 EP400Q96L91 3159 aa22.78■■□□□ 1.24
PCM1-218ENST00000523055 SETBP1Q9Y6X0 1596 aa22.76■■□□□ 1.23
PCM1-218ENST00000523055 METP08581 1390 aa22.76■■□□□ 1.23
PCM1-218ENST00000523055 ADGRL3Q9HAR2 1447 aa22.73■■□□□ 1.23
PCM1-218ENST00000523055 ADAMTS2O95450 1211 aa22.71■■□□□ 1.23
PCM1-218ENST00000523055 ATAD2Q6PL18 1390 aa22.71■■□□□ 1.23
PCM1-218ENST00000523055 NGLY1Q96IV0 654 aa22.7■■□□□ 1.22
PCM1-218ENST00000523055 NALCNQ8IZF0 1738 aa22.7■■□□□ 1.22
PCM1-218ENST00000523055 LAMC1P11047 1609 aa22.69■■□□□ 1.22
PCM1-218ENST00000523055 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
PCM1-218ENST00000523055 FNBP4Q8N3X1 1017 aaPredicted RBP22.66■■□□□ 1.22
PCM1-218ENST00000523055 CLTCL1P53675 1640 aa22.66■■□□□ 1.22
PCM1-218ENST00000523055 SOS2Q07890 1332 aaPredicted RBP22.66■■□□□ 1.22
PCM1-218ENST00000523055 USP21Q9UK80 565 aa22.65■■□□□ 1.22
PCM1-218ENST00000523055 ATRNO75882 1429 aa22.64■■□□□ 1.21
PCM1-218ENST00000523055 TRPC5Q9UL62 973 aaPredicted RBP22.64■■□□□ 1.21
PCM1-218ENST00000523055 ZRANB1Q9UGI0 708 aa22.63■■□□□ 1.21
PCM1-218ENST00000523055 ORAI2Q96SN7 254 aa22.62■■□□□ 1.21
PCM1-218ENST00000523055 KIF1BO60333 1816 aa22.61■■□□□ 1.21
PCM1-218ENST00000523055 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
PCM1-218ENST00000523055 NEXMIFQ5QGS0 1516 aa22.58■■□□□ 1.21
PCM1-218ENST00000523055 COL22A1Q8NFW1 1626 aaPredicted RBP22.58■■□□□ 1.2
PCM1-218ENST00000523055 BCL9LQ86UU0 1499 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms