RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 FAM217BQ9NTX9 383 aaPredicted RBP12.05□□□□□ -0.48
PVT1-214ENST00000522875 DNAJB2P25686 324 aa12.04□□□□□ -0.48
PVT1-214ENST00000522875 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.48
PVT1-214ENST00000522875 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
PVT1-214ENST00000522875 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
PVT1-214ENST00000522875 TMEM134Q9H6X4 195 aa12.02□□□□□ -0.49
PVT1-214ENST00000522875 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
PVT1-214ENST00000522875 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
PVT1-214ENST00000522875 TK2O00142 265 aa12.01□□□□□ -0.49
PVT1-214ENST00000522875 ADGRD1Q6QNK2 874 aa12□□□□□ -0.49
PVT1-214ENST00000522875 ANKRD13DQ6ZTN6 518 aa11.98□□□□□ -0.49
PVT1-214ENST00000522875 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
PVT1-214ENST00000522875 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
PVT1-214ENST00000522875 FAM98CQ17RN3 349 aaKnown RBP11.97□□□□□ -0.49
PVT1-214ENST00000522875 SWT1Q5T5J6 900 aaKnown RBP11.96□□□□□ -0.49
PVT1-214ENST00000522875 NBPF3Q9H094 633 aa11.96□□□□□ -0.49
PVT1-214ENST00000522875 HRO43593 1189 aa11.95□□□□□ -0.5
PVT1-214ENST00000522875 KRTAP3-3Q9BYR6 98 aa11.95□□□□□ -0.5
PVT1-214ENST00000522875 KRTAP3-2Q9BYR7 98 aa11.95□□□□□ -0.5
PVT1-214ENST00000522875 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
PVT1-214ENST00000522875 BAZ1AQ9NRL2 1556 aaPredicted RBP11.93□□□□□ -0.5
PVT1-214ENST00000522875 CD46P15529 392 aa11.93□□□□□ -0.5
PVT1-214ENST00000522875 SAMD7Q7Z3H4 446 aa11.93□□□□□ -0.5
PVT1-214ENST00000522875 LAPTM4BQ86VI4 370 aa11.93□□□□□ -0.5
PVT1-214ENST00000522875 MRPL50Q8N5N7 158 aaKnown RBP11.93□□□□□ -0.5
PVT1-214ENST00000522875 SUPT5HO00267 1087 aaKnown RBP11.92□□□□□ -0.5
PVT1-214ENST00000522875 SULF1Q8IWU6 871 aa11.92□□□□□ -0.5
PVT1-214ENST00000522875 ZFRQ96KR1 1074 aaKnown RBP11.92□□□□□ -0.5
PVT1-214ENST00000522875 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
PVT1-214ENST00000522875 SMARCA4P51532 1647 aa11.91□□□□□ -0.5
PVT1-214ENST00000522875 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
PVT1-214ENST00000522875 MROH2BQ7Z745 1585 aa11.91□□□□□ -0.5
PVT1-214ENST00000522875 POTEMA6NI47 508 aa11.9□□□□□ -0.5
PVT1-214ENST00000522875 RDH13Q8NBN7 331 aa11.9□□□□□ -0.5
PVT1-214ENST00000522875 SLC10A3P09131 477 aa11.89□□□□□ -0.51
PVT1-214ENST00000522875 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
PVT1-214ENST00000522875 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
PVT1-214ENST00000522875 RNF40O75150 1001 aa11.86□□□□□ -0.51
PVT1-214ENST00000522875 CDAN1Q8IWY9 1227 aa11.86□□□□□ -0.51
PVT1-214ENST00000522875 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
PVT1-214ENST00000522875 TBC1D2Q9BYX2 928 aa11.86□□□□□ -0.51
PVT1-214ENST00000522875 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
PVT1-214ENST00000522875 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
PVT1-214ENST00000522875 SPIRE2Q8WWL2 714 aa11.85□□□□□ -0.51
PVT1-214ENST00000522875 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
PVT1-214ENST00000522875 RSPH6AQ9H0K4 717 aa11.84□□□□□ -0.51
PVT1-214ENST00000522875 POLR3EQ9NVU0 708 aa11.84□□□□□ -0.51
PVT1-214ENST00000522875 SLF2Q8IX21 1173 aa11.83□□□□□ -0.52
PVT1-214ENST00000522875 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
PVT1-214ENST00000522875 GOLGA8CPA6NN73 597 aa11.82□□□□□ -0.52
PVT1-214ENST00000522875 GCGRP47871 477 aa11.82□□□□□ -0.52
PVT1-214ENST00000522875 SKIV2LQ15477 1246 aaKnown RBP11.82□□□□□ -0.52
PVT1-214ENST00000522875 NUTM1Q86Y26 1132 aa11.82□□□□□ -0.52
PVT1-214ENST00000522875 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
PVT1-214ENST00000522875 WIZO95785 1651 aa11.81□□□□□ -0.52
PVT1-214ENST00000522875 RSPH4AQ5TD94 716 aa11.81□□□□□ -0.52
PVT1-214ENST00000522875 PROCA1Q8NCQ7 364 aaPredicted RBP11.81□□□□□ -0.52
PVT1-214ENST00000522875 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.81□□□□□ -0.52
PVT1-214ENST00000522875 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
PVT1-214ENST00000522875 PCMTD1Q96MG8 357 aaPredicted RBP11.8□□□□□ -0.52
PVT1-214ENST00000522875 KDM4AO75164 1064 aa11.79□□□□□ -0.52
PVT1-214ENST00000522875 BCAMP50895 628 aa11.79□□□□□ -0.52
PVT1-214ENST00000522875 DIXDC1Q155Q3 683 aa11.79□□□□□ -0.52
PVT1-214ENST00000522875 ANKK1Q8NFD2 765 aa11.79□□□□□ -0.52
PVT1-214ENST00000522875 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
PVT1-214ENST00000522875 MOXD2PA6NHM9 499 aa11.78□□□□□ -0.52
PVT1-214ENST00000522875 CFHP08603 1231 aa11.78□□□□□ -0.52
PVT1-214ENST00000522875 NDUFV2P19404 249 aa11.78□□□□□ -0.52
PVT1-214ENST00000522875 WNT2BQ93097 391 aa11.78□□□□□ -0.52
PVT1-214ENST00000522875 LIMD1Q9UGP4 676 aa11.78□□□□□ -0.52
PVT1-214ENST00000522875 SMARCA2P51531 1590 aa11.77□□□□□ -0.53
PVT1-214ENST00000522875 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.53
PVT1-214ENST00000522875 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.53
PVT1-214ENST00000522875 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
PVT1-214ENST00000522875 ATP1B4Q9UN42 357 aaPredicted RBP11.77□□□□□ -0.53
PVT1-214ENST00000522875 HLA-CQ95604 372 aa11.75□□□□□ -0.53
PVT1-214ENST00000522875 FUT2Q10981 343 aa11.74□□□□□ -0.53
PVT1-214ENST00000522875 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
PVT1-214ENST00000522875 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
PVT1-214ENST00000522875 HPS5Q9UPZ3 1129 aa11.74□□□□□ -0.53
PVT1-214ENST00000522875 SPTLC1O15269 473 aa11.73□□□□□ -0.53
PVT1-214ENST00000522875 HOXA2O43364 376 aa11.73□□□□□ -0.53
PVT1-214ENST00000522875 GUCA2AQ02747 115 aa11.73□□□□□ -0.53
PVT1-214ENST00000522875 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
PVT1-214ENST00000522875 PEG3Q9GZU2 1588 aa11.73□□□□□ -0.53
PVT1-214ENST00000522875 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
PVT1-214ENST00000522875 PPP4CP60510 307 aa11.72□□□□□ -0.53
PVT1-214ENST00000522875 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
PVT1-214ENST00000522875 NCAPD3P42695 1498 aa11.71□□□□□ -0.53
PVT1-214ENST00000522875 USP46P62068 366 aa11.71□□□□□ -0.53
PVT1-214ENST00000522875 KCTD12Q96CX2 325 aaKnown RBP11.71□□□□□ -0.53
PVT1-214ENST00000522875 PCDHB15Q9Y5E8 787 aa11.71□□□□□ -0.53
PVT1-214ENST00000522875 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
PVT1-214ENST00000522875 KMT5BQ4FZB7 885 aa11.69□□□□□ -0.54
PVT1-214ENST00000522875 THSD4Q6ZMP0 1018 aa11.69□□□□□ -0.54
PVT1-214ENST00000522875 WBP1LQ9NX94 342 aa11.69□□□□□ -0.54
PVT1-214ENST00000522875 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
PVT1-214ENST00000522875 APLP1P51693 650 aa11.68□□□□□ -0.54
PVT1-214ENST00000522875 QPCTQ16769 361 aa11.68□□□□□ -0.54
PVT1-214ENST00000522875 PUS10Q3MIT2 529 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms