RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-223ENST00000522746 NOS1P29475 1434 aa22.85■■□□□ 1.25
FAM49B-223ENST00000522746 ARHGEF40Q8TER5 1519 aa22.84■■□□□ 1.25
FAM49B-223ENST00000522746 ZC3H13Q5T200 1668 aaKnown RBP22.84■■□□□ 1.25
FAM49B-223ENST00000522746 HNRNPUQ00839 825 aaKnown RBP eCLIP22.84■■□□□ 1.25
FAM49B-223ENST00000522746 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
FAM49B-223ENST00000522746 FBXO31Q5XUX0 539 aaPredicted RBP22.83■■□□□ 1.25
FAM49B-223ENST00000522746 REREQ9P2R6 1566 aa22.83■■□□□ 1.25
FAM49B-223ENST00000522746 TRHP20396 242 aaPredicted RBP22.82■■□□□ 1.24
FAM49B-223ENST00000522746 ARHGAP31Q2M1Z3 1444 aa22.82■■□□□ 1.24
FAM49B-223ENST00000522746 TMF1P82094 1093 aa22.82■■□□□ 1.24
FAM49B-223ENST00000522746 CFAP70Q5T0N1 1121 aa22.82■■□□□ 1.24
FAM49B-223ENST00000522746 FAM9BQ8IZU0 186 aa22.82■■□□□ 1.24
FAM49B-223ENST00000522746 AGLP35573 1532 aa22.81■■□□□ 1.24
FAM49B-223ENST00000522746 NRXN1Q9ULB1 1477 aa22.8■■□□□ 1.24
FAM49B-223ENST00000522746 NUTM2DQ5VT03 806 aaPredicted RBP22.79■■□□□ 1.24
FAM49B-223ENST00000522746 PPLO60437 1756 aa22.78■■□□□ 1.24
FAM49B-223ENST00000522746 PIK3C2BO00750 1634 aa22.78■■□□□ 1.24
FAM49B-223ENST00000522746 IDI1Q13907 227 aa22.78■■□□□ 1.24
FAM49B-223ENST00000522746 CLTCQ00610 1675 aaKnown RBP22.77■■□□□ 1.24
FAM49B-223ENST00000522746 PREX1Q8TCU6 1659 aa22.76■■□□□ 1.23
FAM49B-223ENST00000522746 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
FAM49B-223ENST00000522746 PER1O15534 1290 aaPredicted RBP22.73■■□□□ 1.23
FAM49B-223ENST00000522746 EIF3AQ14152 1382 aaKnown RBP22.73■■□□□ 1.23
FAM49B-223ENST00000522746 PIK3C2GO75747 1445 aa22.71■■□□□ 1.23
FAM49B-223ENST00000522746 PANK3Q9H999 370 aa22.71■■□□□ 1.23
FAM49B-223ENST00000522746 SUPT16HQ9Y5B9 1047 aaKnown RBP22.71■■□□□ 1.23
FAM49B-223ENST00000522746 ERVK-7P63135 1459 aa22.7■■□□□ 1.22
FAM49B-223ENST00000522746 KTN1Q86UP2 1357 aaKnown RBP22.7■■□□□ 1.22
FAM49B-223ENST00000522746 RPGRIP1LQ68CZ1 1315 aa22.7■■□□□ 1.22
FAM49B-223ENST00000522746 RALBP1Q15311 655 aa22.7■■□□□ 1.22
FAM49B-223ENST00000522746 MYBBP1AQ9BQG0 1328 aaKnown RBP22.68■■□□□ 1.22
FAM49B-223ENST00000522746 MYO5BQ9ULV0 1848 aa22.68■■□□□ 1.22
FAM49B-223ENST00000522746 SETBP1Q9Y6X0 1596 aa22.68■■□□□ 1.22
FAM49B-223ENST00000522746 NEXMIFQ5QGS0 1516 aa22.67■■□□□ 1.22
FAM49B-223ENST00000522746 PARD3Q8TEW0 1356 aa22.67■■□□□ 1.22
FAM49B-223ENST00000522746 SLC52A1Q9NWF4 448 aa22.66■■□□□ 1.22
FAM49B-223ENST00000522746 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
FAM49B-223ENST00000522746 C14orf93Q9H972 538 aaKnown RBP22.66■■□□□ 1.22
FAM49B-223ENST00000522746 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
FAM49B-223ENST00000522746 CDCA8Q53HL2 280 aa22.64■■□□□ 1.21
FAM49B-223ENST00000522746 DNAJC5Q9H3Z4 198 aa22.64■■□□□ 1.21
FAM49B-223ENST00000522746 TMEM131LA2VDJ0 1609 aa22.64■■□□□ 1.21
FAM49B-223ENST00000522746 ADGRB1O14514 1584 aa22.64■■□□□ 1.21
FAM49B-223ENST00000522746 TMEM132EQ6IEE7 984 aa22.63■■□□□ 1.21
FAM49B-223ENST00000522746 MYO3AQ8NEV4 1616 aa22.63■■□□□ 1.21
FAM49B-223ENST00000522746 BRD4O60885 1362 aaPredicted RBP22.63■■□□□ 1.21
FAM49B-223ENST00000522746 CC2D1BQ5T0F9 858 aaKnown RBP22.63■■□□□ 1.21
FAM49B-223ENST00000522746 PNISRQ8TF01 805 aaKnown RBP22.63■■□□□ 1.21
FAM49B-223ENST00000522746 MYOM1P52179 1685 aa22.62■■□□□ 1.21
FAM49B-223ENST00000522746 KDM5AP29375 1690 aaKnown RBP22.61■■□□□ 1.21
FAM49B-223ENST00000522746 ZBED9Q6R2W3 1325 aa22.61■■□□□ 1.21
FAM49B-223ENST00000522746 ESF1Q9H501 851 aaKnown RBP22.6■■□□□ 1.21
FAM49B-223ENST00000522746 ZMYM3Q14202 1370 aa22.6■■□□□ 1.21
FAM49B-223ENST00000522746 VGFO15240 615 aaPredicted RBP22.6■■□□□ 1.21
FAM49B-223ENST00000522746 TRAK1Q9UPV9 953 aa22.59■■□□□ 1.21
FAM49B-223ENST00000522746 SPATA31D1Q6ZQQ2 1576 aa22.59■■□□□ 1.21
FAM49B-223ENST00000522746 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
FAM49B-223ENST00000522746 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
FAM49B-223ENST00000522746 FKBP8Q14318 412 aa22.57■■□□□ 1.2
FAM49B-223ENST00000522746 STAG3Q9UJ98 1225 aa22.57■■□□□ 1.2
FAM49B-223ENST00000522746 SBNO2Q9Y2G9 1366 aa22.55■■□□□ 1.2
FAM49B-223ENST00000522746 LRPPRCP42704 1394 aaKnown RBP22.55■■□□□ 1.2
FAM49B-223ENST00000522746 SLC24A1O60721 1099 aa22.55■■□□□ 1.2
FAM49B-223ENST00000522746 QRICH2Q9H0J4 1663 aa22.54■■□□□ 1.2
FAM49B-223ENST00000522746 KNSTRNQ9Y448 316 aa22.54■■□□□ 1.2
FAM49B-223ENST00000522746 ZFYVE9O95405 1425 aa22.54■■□□□ 1.2
FAM49B-223ENST00000522746 CEBPAP49715 358 aaPredicted RBP22.52■■□□□ 1.2
FAM49B-223ENST00000522746 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
FAM49B-223ENST00000522746 A2ML1A8K2U0 1454 aa22.51■■□□□ 1.19
FAM49B-223ENST00000522746 NEFLP07196 543 aa22.51■■□□□ 1.19
FAM49B-223ENST00000522746 AMER1Q5JTC6 1135 aaPredicted RBP22.5■■□□□ 1.19
FAM49B-223ENST00000522746 SENP3-EIF4A1A0A087X0R7 540 aa22.5■■□□□ 1.19
FAM49B-223ENST00000522746 ASXL1Q8IXJ9 1541 aa22.49■■□□□ 1.19
FAM49B-223ENST00000522746 ARHGEF28Q8N1W1 1705 aaKnown RBP22.49■■□□□ 1.19
FAM49B-223ENST00000522746 BCANQ96GW7 911 aa22.48■■□□□ 1.19
FAM49B-223ENST00000522746 STK26Q9P289 416 aa22.46■■□□□ 1.19
FAM49B-223ENST00000522746 TNRQ92752 1358 aa22.46■■□□□ 1.19
FAM49B-223ENST00000522746 RIMS2Q9UQ26 1411 aa22.44■■□□□ 1.18
FAM49B-223ENST00000522746 CARD14Q9BXL6 1004 aa22.43■■□□□ 1.18
FAM49B-223ENST00000522746 SAFB2Q14151 953 aaKnown RBP eCLIP22.42■■□□□ 1.18
FAM49B-223ENST00000522746 PPP2R1AP30153 589 aa22.42■■□□□ 1.18
FAM49B-223ENST00000522746 NPC1L1Q9UHC9 1359 aa22.41■■□□□ 1.18
FAM49B-223ENST00000522746 ALKQ9UM73 1620 aa22.39■■□□□ 1.18
FAM49B-223ENST00000522746 TULP4Q9NRJ4 1543 aa22.39■■□□□ 1.18
FAM49B-223ENST00000522746 SMG6Q86US8 1419 aaKnown RBP22.38■■□□□ 1.17
FAM49B-223ENST00000522746 FER1L4A9Z1Z3 1794 aa22.37■■□□□ 1.17
FAM49B-223ENST00000522746 SLC12A5Q9H2X9 1139 aa22.37■■□□□ 1.17
FAM49B-223ENST00000522746 PTPRMP28827 1452 aa22.37■■□□□ 1.17
FAM49B-223ENST00000522746 C3P01024 1663 aa22.36■■□□□ 1.17
FAM49B-223ENST00000522746 IRX6P78412 446 aaPredicted RBP22.36■■□□□ 1.17
FAM49B-223ENST00000522746 EVC2Q86UK5 1308 aa22.35■■□□□ 1.17
FAM49B-223ENST00000522746 YTHDC2Q9H6S0 1430 aaKnown RBP22.35■■□□□ 1.17
FAM49B-223ENST00000522746 UBR1Q8IWV7 1749 aa22.34■■□□□ 1.17
FAM49B-223ENST00000522746 NUDCQ9Y266 331 aa22.33■■□□□ 1.17
FAM49B-223ENST00000522746 BLMP54132 1417 aaPredicted RBP22.32■■□□□ 1.16
FAM49B-223ENST00000522746 NSD3Q9BZ95 1437 aa22.32■■□□□ 1.16
FAM49B-223ENST00000522746 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
FAM49B-223ENST00000522746 PRAM1Q96QH2 718 aa22.31■■□□□ 1.16
FAM49B-223ENST00000522746 CABP2Q9NPB3 220 aa22.31■■□□□ 1.16
FAM49B-223ENST00000522746 SALL2Q9Y467 1007 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms