RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
PABPC1-219ENST00000522387 TIMELESSQ9UNS1 1208 aa17.66■□□□□ 0.42
PABPC1-219ENST00000522387 TXNDC2Q86VQ3 553 aa17.65■□□□□ 0.42
PABPC1-219ENST00000522387 RIMS2Q9UQ26 1411 aa17.63■□□□□ 0.41
PABPC1-219ENST00000522387 NBPF1Q3BBV0 1214 aa17.63■□□□□ 0.41
PABPC1-219ENST00000522387 HIRIP3Q9BW71 556 aaPredicted RBP17.63■□□□□ 0.41
PABPC1-219ENST00000522387 TMEM2Q9UHN6 1383 aa17.63■□□□□ 0.41
PABPC1-219ENST00000522387 VGFO15240 615 aaPredicted RBP17.63■□□□□ 0.41
PABPC1-219ENST00000522387 CFAP70Q5T0N1 1121 aa17.63■□□□□ 0.41
PABPC1-219ENST00000522387 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
PABPC1-219ENST00000522387 EID1Q9Y6B2 187 aa17.61■□□□□ 0.41
PABPC1-219ENST00000522387 TMEM132EQ6IEE7 984 aa17.6■□□□□ 0.41
PABPC1-219ENST00000522387 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
PABPC1-219ENST00000522387 SLC26A8Q96RN1 970 aa17.6■□□□□ 0.41
PABPC1-219ENST00000522387 PPLO60437 1756 aa17.6■□□□□ 0.41
PABPC1-219ENST00000522387 NCKAP5LQ9HCH0 1330 aa17.59■□□□□ 0.41
PABPC1-219ENST00000522387 PRAG1Q86YV5 1406 aa17.59■□□□□ 0.41
PABPC1-219ENST00000522387 ZFYVE9O95405 1425 aa17.58■□□□□ 0.4
PABPC1-219ENST00000522387 ANKLE2Q86XL3 938 aa17.57■□□□□ 0.4
PABPC1-219ENST00000522387 IFT172Q9UG01 1749 aa17.57■□□□□ 0.4
PABPC1-219ENST00000522387 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
PABPC1-219ENST00000522387 HDGFP51858 240 aaKnown RBP17.56■□□□□ 0.4
PABPC1-219ENST00000522387 ROCK2O75116 1388 aaKnown RBP17.56■□□□□ 0.4
PABPC1-219ENST00000522387 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
PABPC1-219ENST00000522387 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.55■□□□□ 0.4
PABPC1-219ENST00000522387 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
PABPC1-219ENST00000522387 LMTK3Q96Q04 1460 aa17.55■□□□□ 0.4
PABPC1-219ENST00000522387 STK26Q9P289 416 aa17.55■□□□□ 0.4
PABPC1-219ENST00000522387 ZNF142P52746 1687 aaPredicted RBP17.54■□□□□ 0.4
PABPC1-219ENST00000522387 NEURL4Q96JN8 1562 aa17.54■□□□□ 0.4
PABPC1-219ENST00000522387 PIK3C2GO75747 1445 aa17.53■□□□□ 0.4
PABPC1-219ENST00000522387 MYOM2P54296 1465 aa17.52■□□□□ 0.4
PABPC1-219ENST00000522387 SCAF11Q99590 1463 aaKnown RBP17.52■□□□□ 0.39
PABPC1-219ENST00000522387 KDM5AP29375 1690 aaKnown RBP17.52■□□□□ 0.39
PABPC1-219ENST00000522387 SLIT1O75093 1534 aa17.51■□□□□ 0.39
PABPC1-219ENST00000522387 ARHGAP23Q9P227 1491 aa17.51■□□□□ 0.39
PABPC1-219ENST00000522387 C14orf93Q9H972 538 aaKnown RBP17.5■□□□□ 0.39
PABPC1-219ENST00000522387 TRAK1Q9UPV9 953 aa17.5■□□□□ 0.39
PABPC1-219ENST00000522387 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
PABPC1-219ENST00000522387 SAFB2Q14151 953 aaKnown RBP eCLIP17.48■□□□□ 0.39
PABPC1-219ENST00000522387 NRXN1Q9ULB1 1477 aa17.48■□□□□ 0.39
PABPC1-219ENST00000522387 TRPM1Q7Z4N2 1603 aa17.48■□□□□ 0.39
PABPC1-219ENST00000522387 IQGAP1P46940 1657 aa17.47■□□□□ 0.39
PABPC1-219ENST00000522387 METP08581 1390 aa17.47■□□□□ 0.39
PABPC1-219ENST00000522387 PLEKHG1Q9ULL1 1385 aa17.47■□□□□ 0.39
PABPC1-219ENST00000522387 ALKQ9UM73 1620 aa17.46■□□□□ 0.39
PABPC1-219ENST00000522387 RALGAPBQ86X10 1494 aa17.45■□□□□ 0.38
PABPC1-219ENST00000522387 RBM33Q96EV2 1170 aaKnown RBP17.45■□□□□ 0.38
PABPC1-219ENST00000522387 HSPA5P11021 654 aaKnown RBP17.44■□□□□ 0.38
PABPC1-219ENST00000522387 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
PABPC1-219ENST00000522387 NRXN3Q9Y4C0 1643 aa17.44■□□□□ 0.38
PABPC1-219ENST00000522387 ADAMTS13Q76LX8 1427 aa17.44■□□□□ 0.38
PABPC1-219ENST00000522387 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
PABPC1-219ENST00000522387 NPHP4O75161 1426 aaPredicted RBP17.43■□□□□ 0.38
PABPC1-219ENST00000522387 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.38
PABPC1-219ENST00000522387 USP47Q96K76 1375 aa17.43■□□□□ 0.38
PABPC1-219ENST00000522387 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
PABPC1-219ENST00000522387 POLR1AO95602 1720 aaPredicted RBP17.4■□□□□ 0.38
PABPC1-219ENST00000522387 ASXL1Q8IXJ9 1541 aa17.4■□□□□ 0.38
PABPC1-219ENST00000522387 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
PABPC1-219ENST00000522387 POLR3GLQ9BT43 218 aa17.39■□□□□ 0.38
PABPC1-219ENST00000522387 AMOTL2Q9Y2J4 779 aa17.39■□□□□ 0.38
PABPC1-219ENST00000522387 STRCQ7RTU9 1775 aa17.39■□□□□ 0.37
PABPC1-219ENST00000522387 DIEXFQ68CQ4 756 aaKnown RBP17.39■□□□□ 0.37
PABPC1-219ENST00000522387 ADGRB1O14514 1584 aa17.39■□□□□ 0.37
PABPC1-219ENST00000522387 TBX22Q9Y458 520 aa17.38■□□□□ 0.37
PABPC1-219ENST00000522387 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
PABPC1-219ENST00000522387 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
PABPC1-219ENST00000522387 KCNA6P17658 529 aa17.37■□□□□ 0.37
PABPC1-219ENST00000522387 GPRASP1Q5JY77 1395 aa17.37■□□□□ 0.37
PABPC1-219ENST00000522387 POGKQ9P215 609 aa17.37■□□□□ 0.37
PABPC1-219ENST00000522387 PTPRUQ92729 1446 aa17.36■□□□□ 0.37
PABPC1-219ENST00000522387 ZNF316A6NFI3 1004 aaPredicted RBP17.36■□□□□ 0.37
PABPC1-219ENST00000522387 SETD1AO15047 1707 aaKnown RBP17.36■□□□□ 0.37
PABPC1-219ENST00000522387 KIAA1210Q9ULL0 1709 aa17.35■□□□□ 0.37
PABPC1-219ENST00000522387 MED14O60244 1454 aa17.35■□□□□ 0.37
PABPC1-219ENST00000522387 PLEKHH1Q9ULM0 1364 aa17.35■□□□□ 0.37
PABPC1-219ENST00000522387 LAMC1P11047 1609 aa17.34■□□□□ 0.37
PABPC1-219ENST00000522387 MINK1Q8N4C8 1332 aaPredicted RBP17.33■□□□□ 0.37
PABPC1-219ENST00000522387 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
PABPC1-219ENST00000522387 ROBO2Q9HCK4 1378 aa17.32■□□□□ 0.36
PABPC1-219ENST00000522387 ZNF335Q9H4Z2 1342 aaPredicted RBP17.32■□□□□ 0.36
PABPC1-219ENST00000522387 CENPJQ9HC77 1338 aaPredicted RBP17.31■□□□□ 0.36
PABPC1-219ENST00000522387 LRPPRCP42704 1394 aaKnown RBP17.31■□□□□ 0.36
PABPC1-219ENST00000522387 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
PABPC1-219ENST00000522387 EIF3AQ14152 1382 aaKnown RBP17.29■□□□□ 0.36
PABPC1-219ENST00000522387 TESK2Q96S53 571 aa17.29■□□□□ 0.36
PABPC1-219ENST00000522387 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
PABPC1-219ENST00000522387 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
PABPC1-219ENST00000522387 ARHGEF28Q8N1W1 1705 aaKnown RBP17.27■□□□□ 0.36
PABPC1-219ENST00000522387 PROSER2Q86WR7 435 aaPredicted RBP17.27■□□□□ 0.35
PABPC1-219ENST00000522387 DIP2AQ14689 1571 aa17.26■□□□□ 0.35
PABPC1-219ENST00000522387 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
PABPC1-219ENST00000522387 DISP3Q9P2K9 1392 aa17.25■□□□□ 0.35
PABPC1-219ENST00000522387 CHD2O14647 1828 aaKnown RBP17.25■□□□□ 0.35
PABPC1-219ENST00000522387 CABP2Q9NPB3 220 aa17.24■□□□□ 0.35
PABPC1-219ENST00000522387 WASHC2AQ641Q2 1341 aa17.23■□□□□ 0.35
PABPC1-219ENST00000522387 PIK3R4Q99570 1358 aa17.23■□□□□ 0.35
PABPC1-219ENST00000522387 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
PABPC1-219ENST00000522387 STRCP1A6NGW2 1772 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms