RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SLIT1O75093 1534 aa31.6■■■□□ 2.65
PTP4A3-204ENST00000521578 ARHGAP23Q9P227 1491 aa31.59■■■□□ 2.65
PTP4A3-204ENST00000521578 TXNDC2Q86VQ3 553 aa31.58■■■□□ 2.65
PTP4A3-204ENST00000521578 ZFYVE9O95405 1425 aa31.57■■■□□ 2.64
PTP4A3-204ENST00000521578 LTKP29376 864 aa31.57■■■□□ 2.64
PTP4A3-204ENST00000521578 EID1Q9Y6B2 187 aa31.56■■■□□ 2.64
PTP4A3-204ENST00000521578 ANKLE2Q86XL3 938 aa31.55■■■□□ 2.64
PTP4A3-204ENST00000521578 NEXMIFQ5QGS0 1516 aa31.55■■■□□ 2.64
PTP4A3-204ENST00000521578 RPGRIP1LQ68CZ1 1315 aa31.55■■■□□ 2.64
PTP4A3-204ENST00000521578 TIMELESSQ9UNS1 1208 aa31.55■■■□□ 2.64
PTP4A3-204ENST00000521578 NCKAP5LQ9HCH0 1330 aa31.54■■■□□ 2.64
PTP4A3-204ENST00000521578 PPP1R15AO75807 674 aaPredicted RBP31.53■■■□□ 2.64
PTP4A3-204ENST00000521578 HDGFP51858 240 aaKnown RBP31.53■■■□□ 2.64
PTP4A3-204ENST00000521578 SENP3Q9H4L4 574 aaPredicted RBP31.53■■■□□ 2.64
PTP4A3-204ENST00000521578 DCAF11Q8TEB1 546 aa31.52■■■□□ 2.64
PTP4A3-204ENST00000521578 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.52■■■□□ 2.64
PTP4A3-204ENST00000521578 L3MBTL2Q969R5 705 aa31.52■■■□□ 2.64
PTP4A3-204ENST00000521578 PPLO60437 1756 aa31.52■■■□□ 2.64
PTP4A3-204ENST00000521578 TONSLQ96HA7 1378 aa31.51■■■□□ 2.64
PTP4A3-204ENST00000521578 SCAF11Q99590 1463 aaKnown RBP31.51■■■□□ 2.63
PTP4A3-204ENST00000521578 KDM2AQ9Y2K7 1162 aa31.51■■■□□ 2.63
PTP4A3-204ENST00000521578 IFT172Q9UG01 1749 aa31.5■■■□□ 2.63
PTP4A3-204ENST00000521578 POLR1AO95602 1720 aaPredicted RBP31.48■■■□□ 2.63
PTP4A3-204ENST00000521578 VGFO15240 615 aaPredicted RBP31.47■■■□□ 2.63
PTP4A3-204ENST00000521578 STRCQ7RTU9 1775 aa31.47■■■□□ 2.63
PTP4A3-204ENST00000521578 ADGRF5Q8IZF2 1346 aa31.44■■■□□ 2.62
PTP4A3-204ENST00000521578 BCANQ96GW7 911 aa31.44■■■□□ 2.62
PTP4A3-204ENST00000521578 NPHP4O75161 1426 aaPredicted RBP31.4■■■□□ 2.62
PTP4A3-204ENST00000521578 PLEKHG1Q9ULL1 1385 aa31.4■■■□□ 2.62
PTP4A3-204ENST00000521578 MYOM2P54296 1465 aa31.4■■■□□ 2.62
PTP4A3-204ENST00000521578 MED14O60244 1454 aa31.38■■■□□ 2.61
PTP4A3-204ENST00000521578 STAC3Q96MF2 364 aa31.36■■■□□ 2.61
PTP4A3-204ENST00000521578 IQGAP1P46940 1657 aa31.35■■■□□ 2.61
PTP4A3-204ENST00000521578 SLC26A8Q96RN1 970 aa31.34■■■□□ 2.61
PTP4A3-204ENST00000521578 NRXN1Q9ULB1 1477 aa31.33■■■□□ 2.61
PTP4A3-204ENST00000521578 PIK3C2GO75747 1445 aa31.32■■■□□ 2.6
PTP4A3-204ENST00000521578 NRXN3Q9Y4C0 1643 aa31.31■■■□□ 2.6
PTP4A3-204ENST00000521578 SETBP1Q9Y6X0 1596 aa31.31■■■□□ 2.6
PTP4A3-204ENST00000521578 ADAMTS13Q76LX8 1427 aa31.29■■■□□ 2.6
PTP4A3-204ENST00000521578 PRAG1Q86YV5 1406 aa31.29■■■□□ 2.6
PTP4A3-204ENST00000521578 DMRT2Q9Y5R5 561 aa31.29■■■□□ 2.6
PTP4A3-204ENST00000521578 CFAP70Q5T0N1 1121 aa31.27■■■□□ 2.6
PTP4A3-204ENST00000521578 NBPF8Q3BBV2 869 aa31.26■■■□□ 2.59
PTP4A3-204ENST00000521578 ALKQ9UM73 1620 aa31.25■■■□□ 2.59
PTP4A3-204ENST00000521578 C14orf93Q9H972 538 aaKnown RBP31.24■■■□□ 2.59
PTP4A3-204ENST00000521578 TBX22Q9Y458 520 aa31.24■■■□□ 2.59
PTP4A3-204ENST00000521578 MIER1Q8N108 512 aa31.2■■■□□ 2.58
PTP4A3-204ENST00000521578 DIP2AQ14689 1571 aa31.2■■■□□ 2.58
PTP4A3-204ENST00000521578 SETD1AO15047 1707 aaKnown RBP31.19■■■□□ 2.58
PTP4A3-204ENST00000521578 METP08581 1390 aa31.18■■■□□ 2.58
PTP4A3-204ENST00000521578 TMEM132EQ6IEE7 984 aa31.18■■■□□ 2.58
PTP4A3-204ENST00000521578 LAMC1P11047 1609 aa31.17■■■□□ 2.58
PTP4A3-204ENST00000521578 NBPF1Q3BBV0 1214 aa31.15■■■□□ 2.58
PTP4A3-204ENST00000521578 TRPM1Q7Z4N2 1603 aa31.13■■■□□ 2.57
PTP4A3-204ENST00000521578 KIAA1210Q9ULL0 1709 aa31.12■■■□□ 2.57
PTP4A3-204ENST00000521578 ASXL1Q8IXJ9 1541 aa31.12■■■□□ 2.57
PTP4A3-204ENST00000521578 ZNF335Q9H4Z2 1342 aaPredicted RBP31.1■■■□□ 2.57
PTP4A3-204ENST00000521578 PTPRUQ92729 1446 aa31.09■■■□□ 2.57
PTP4A3-204ENST00000521578 PIK3R4Q99570 1358 aa31.09■■■□□ 2.57
PTP4A3-204ENST00000521578 STK26Q9P289 416 aa31.09■■■□□ 2.57
PTP4A3-204ENST00000521578 ROCK2O75116 1388 aaKnown RBP31.08■■■□□ 2.57
PTP4A3-204ENST00000521578 ADGRB1O14514 1584 aa31.08■■■□□ 2.57
PTP4A3-204ENST00000521578 CHD2O14647 1828 aaKnown RBP31.08■■■□□ 2.57
PTP4A3-204ENST00000521578 AMOTL2Q9Y2J4 779 aa31.07■■■□□ 2.56
PTP4A3-204ENST00000521578 RALGAPBQ86X10 1494 aa31.06■■■□□ 2.56
PTP4A3-204ENST00000521578 KCNA6P17658 529 aa31.06■■■□□ 2.56
PTP4A3-204ENST00000521578 YTHDC2Q9H6S0 1430 aaKnown RBP31.04■■■□□ 2.56
PTP4A3-204ENST00000521578 STRCP1A6NGW2 1772 aa31.03■■■□□ 2.56
PTP4A3-204ENST00000521578 LRPPRCP42704 1394 aaKnown RBP31.02■■■□□ 2.56
PTP4A3-204ENST00000521578 CENPBP07199 599 aaPredicted RBP31.01■■■□□ 2.55
PTP4A3-204ENST00000521578 CARD11Q9BXL7 1154 aa31.01■■■□□ 2.55
PTP4A3-204ENST00000521578 TRAK1Q9UPV9 953 aa31■■■□□ 2.55
PTP4A3-204ENST00000521578 NWD1Q149M9 1564 aa30.99■■■□□ 2.55
PTP4A3-204ENST00000521578 XRN1Q8IZH2 1706 aaKnown RBP30.99■■■□□ 2.55
PTP4A3-204ENST00000521578 GPRASP1Q5JY77 1395 aa30.98■■■□□ 2.55
PTP4A3-204ENST00000521578 ABCC11Q96J66 1382 aa30.97■■■□□ 2.55
PTP4A3-204ENST00000521578 ROBO2Q9HCK4 1378 aa30.94■■■□□ 2.54
PTP4A3-204ENST00000521578 RBM33Q96EV2 1170 aaKnown RBP30.93■■■□□ 2.54
PTP4A3-204ENST00000521578 PROSER2Q86WR7 435 aaPredicted RBP30.93■■■□□ 2.54
PTP4A3-204ENST00000521578 TECPR2O15040 1411 aa30.92■■■□□ 2.54
PTP4A3-204ENST00000521578 KNDC1Q76NI1 1749 aa30.92■■■□□ 2.54
PTP4A3-204ENST00000521578 NKTRP30414 1462 aaKnown RBP30.92■■■□□ 2.54
PTP4A3-204ENST00000521578 LTBP4Q8N2S1 1624 aa30.9■■■□□ 2.54
PTP4A3-204ENST00000521578 WAPLQ7Z5K2 1190 aa30.9■■■□□ 2.54
PTP4A3-204ENST00000521578 CPS1P31327 1500 aa30.9■■■□□ 2.54
PTP4A3-204ENST00000521578 PTCH1Q13635 1447 aa30.9■■■□□ 2.54
PTP4A3-204ENST00000521578 PRAM1Q96QH2 718 aa30.88■■■□□ 2.53
PTP4A3-204ENST00000521578 SAFB2Q14151 953 aaKnown RBP eCLIP30.87■■■□□ 2.532e-6■■■■□ 20
PTP4A3-204ENST00000521578 PLEKHH1Q9ULM0 1364 aa30.87■■■□□ 2.53
PTP4A3-204ENST00000521578 DLC1Q96QB1 1528 aa30.87■■■□□ 2.53
PTP4A3-204ENST00000521578 ARHGEF28Q8N1W1 1705 aaKnown RBP30.87■■■□□ 2.53
PTP4A3-204ENST00000521578 POGKQ9P215 609 aa30.87■■■□□ 2.53
PTP4A3-204ENST00000521578 LRRC7Q96NW7 1537 aa30.85■■■□□ 2.53
PTP4A3-204ENST00000521578 TMEM94Q12767 1356 aa30.85■■■□□ 2.53
PTP4A3-204ENST00000521578 SIRT1Q96EB6 747 aa30.84■■■□□ 2.53
PTP4A3-204ENST00000521578 FAM135BQ49AJ0 1406 aa30.84■■■□□ 2.53
PTP4A3-204ENST00000521578 USP47Q96K76 1375 aa30.82■■■□□ 2.52
PTP4A3-204ENST00000521578 EIF3AQ14152 1382 aaKnown RBP30.81■■■□□ 2.52
PTP4A3-204ENST00000521578 C14orf37Q86TY3 774 aa30.8■■■□□ 2.52
PTP4A3-204ENST00000521578 CENPJQ9HC77 1338 aaPredicted RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms