RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 KANK1Q14678 1352 aa17.99■□□□□ 0.47
NEFM-205ENST00000521540 SPHKAPQ2M3C7 1700 aa17.99■□□□□ 0.47
NEFM-205ENST00000521540 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
NEFM-205ENST00000521540 MADDQ8WXG6 1647 aa17.99■□□□□ 0.47
NEFM-205ENST00000521540 PTPRTO14522 1441 aa17.98■□□□□ 0.47
NEFM-205ENST00000521540 NEURL4Q96JN8 1562 aa17.98■□□□□ 0.47
NEFM-205ENST00000521540 ZC3H13Q5T200 1668 aaKnown RBP17.98■□□□□ 0.47
NEFM-205ENST00000521540 KDM4FA0A1W2PPD8 638 aa17.97■□□□□ 0.47
NEFM-205ENST00000521540 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
NEFM-205ENST00000521540 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
NEFM-205ENST00000521540 PARD3Q8TEW0 1356 aa17.97■□□□□ 0.47
NEFM-205ENST00000521540 ABCC3O15438 1527 aa17.96■□□□□ 0.47
NEFM-205ENST00000521540 TMF1P82094 1093 aa17.95■□□□□ 0.46
NEFM-205ENST00000521540 INSRP06213 1382 aa17.95■□□□□ 0.46
NEFM-205ENST00000521540 CLTCQ00610 1675 aaKnown RBP17.95■□□□□ 0.46
NEFM-205ENST00000521540 LMTK2Q8IWU2 1503 aa17.95■□□□□ 0.46
NEFM-205ENST00000521540 NLRP13Q86W25 1043 aa17.95■□□□□ 0.46
NEFM-205ENST00000521540 TESK2Q96S53 571 aa17.95■□□□□ 0.46
NEFM-205ENST00000521540 MROH2AA6NES4 1674 aa17.94■□□□□ 0.46
NEFM-205ENST00000521540 RIMS1Q86UR5 1692 aaKnown RBP17.94■□□□□ 0.46
NEFM-205ENST00000521540 IRX6P78412 446 aaPredicted RBP17.93■□□□□ 0.46
NEFM-205ENST00000521540 RBM19Q9Y4C8 960 aaKnown RBP17.93■□□□□ 0.46
NEFM-205ENST00000521540 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
NEFM-205ENST00000521540 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
NEFM-205ENST00000521540 KIAA1210Q9ULL0 1709 aa17.92■□□□□ 0.46
NEFM-205ENST00000521540 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
NEFM-205ENST00000521540 CAMSAP1Q5T5Y3 1602 aa17.91■□□□□ 0.46
NEFM-205ENST00000521540 CLTCL1P53675 1640 aa17.91■□□□□ 0.46
NEFM-205ENST00000521540 EFCAB6Q5THR3 1501 aa17.9■□□□□ 0.46
NEFM-205ENST00000521540 CNGB1Q14028 1251 aaPredicted RBP17.9■□□□□ 0.46
NEFM-205ENST00000521540 ESF1Q9H501 851 aaKnown RBP17.9■□□□□ 0.46
NEFM-205ENST00000521540 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.46
NEFM-205ENST00000521540 CDCA8Q53HL2 280 aa17.88■□□□□ 0.45
NEFM-205ENST00000521540 C3P01024 1663 aa17.87■□□□□ 0.45
NEFM-205ENST00000521540 PDE3BQ13370 1112 aa17.87■□□□□ 0.45
NEFM-205ENST00000521540 SCAF11Q99590 1463 aaKnown RBP17.87■□□□□ 0.45
NEFM-205ENST00000521540 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
NEFM-205ENST00000521540 ARHGAP31Q2M1Z3 1444 aa17.86■□□□□ 0.45
NEFM-205ENST00000521540 PTPRMP28827 1452 aa17.86■□□□□ 0.45
NEFM-205ENST00000521540 ZMYM3Q14202 1370 aa17.86■□□□□ 0.45
NEFM-205ENST00000521540 NPATQ14207 1427 aa17.84■□□□□ 0.45
NEFM-205ENST00000521540 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
NEFM-205ENST00000521540 PANK3Q9H999 370 aa17.84■□□□□ 0.45
NEFM-205ENST00000521540 KIF1BO60333 1816 aa17.83■□□□□ 0.45
NEFM-205ENST00000521540 MYOM2P54296 1465 aa17.83■□□□□ 0.44
NEFM-205ENST00000521540 SYNMO15061 1565 aa17.82■□□□□ 0.44
NEFM-205ENST00000521540 PREX1Q8TCU6 1659 aa17.8■□□□□ 0.44
NEFM-205ENST00000521540 CEBPAP49715 358 aaPredicted RBP17.8■□□□□ 0.44
NEFM-205ENST00000521540 ANP32EQ9BTT0 268 aa17.8■□□□□ 0.44
NEFM-205ENST00000521540 FANCIQ9NVI1 1328 aa17.79■□□□□ 0.44
NEFM-205ENST00000521540 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
NEFM-205ENST00000521540 BLMP54132 1417 aaPredicted RBP17.79■□□□□ 0.44
NEFM-205ENST00000521540 ERVK-7P63135 1459 aa17.79■□□□□ 0.44
NEFM-205ENST00000521540 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
NEFM-205ENST00000521540 B4GALNT3Q6L9W6 998 aa17.78■□□□□ 0.44
NEFM-205ENST00000521540 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.43
NEFM-205ENST00000521540 CFAP65Q6ZU64 1925 aaKnown RBP17.77■□□□□ 0.43
NEFM-205ENST00000521540 NPC1L1Q9UHC9 1359 aa17.76■□□□□ 0.43
NEFM-205ENST00000521540 NOS1P29475 1434 aa17.76■□□□□ 0.43
NEFM-205ENST00000521540 KDM5AP29375 1690 aaKnown RBP17.76■□□□□ 0.43
NEFM-205ENST00000521540 CC2D1BQ5T0F9 858 aaKnown RBP17.75■□□□□ 0.43
NEFM-205ENST00000521540 FBXO31Q5XUX0 539 aaPredicted RBP17.75■□□□□ 0.43
NEFM-205ENST00000521540 KNSTRNQ9Y448 316 aa17.75■□□□□ 0.43
NEFM-205ENST00000521540 ASXL1Q8IXJ9 1541 aa17.73■□□□□ 0.43
NEFM-205ENST00000521540 NRXN1Q9ULB1 1477 aa17.73■□□□□ 0.43
NEFM-205ENST00000521540 MYOM1P52179 1685 aa17.72■□□□□ 0.43
NEFM-205ENST00000521540 CCDC136Q96JN2 1154 aa17.72■□□□□ 0.43
NEFM-205ENST00000521540 TNRQ92752 1358 aa17.72■□□□□ 0.43
NEFM-205ENST00000521540 MYO3AQ8NEV4 1616 aa17.71■□□□□ 0.43
NEFM-205ENST00000521540 SETD1BQ9UPS6 1966 aaKnown RBP17.71■□□□□ 0.43
NEFM-205ENST00000521540 RRP1P56182 461 aaKnown RBP17.71■□□□□ 0.43
NEFM-205ENST00000521540 RCAN3Q9UKA8 241 aa17.71■□□□□ 0.43
NEFM-205ENST00000521540 SETBP1Q9Y6X0 1596 aa17.7■□□□□ 0.42
NEFM-205ENST00000521540 PIK3C2BO00750 1634 aa17.7■□□□□ 0.42
NEFM-205ENST00000521540 ADGRB3O60242 1522 aa17.7■□□□□ 0.42
NEFM-205ENST00000521540 PIK3C2GO75747 1445 aa17.69■□□□□ 0.42
NEFM-205ENST00000521540 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
NEFM-205ENST00000521540 UGGT1Q9NYU2 1555 aa17.68■□□□□ 0.42
NEFM-205ENST00000521540 SBNO2Q9Y2G9 1366 aa17.68■□□□□ 0.42
NEFM-205ENST00000521540 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
NEFM-205ENST00000521540 ZNF142P52746 1687 aaPredicted RBP17.67■□□□□ 0.42
NEFM-205ENST00000521540 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
NEFM-205ENST00000521540 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
NEFM-205ENST00000521540 PPLO60437 1756 aa17.65■□□□□ 0.42
NEFM-205ENST00000521540 RPGRIP1LQ68CZ1 1315 aa17.65■□□□□ 0.42
NEFM-205ENST00000521540 A2ML1A8K2U0 1454 aa17.64■□□□□ 0.41
NEFM-205ENST00000521540 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.41
NEFM-205ENST00000521540 CFAP70Q5T0N1 1121 aa17.64■□□□□ 0.41
NEFM-205ENST00000521540 SLC52A1Q9NWF4 448 aa17.64■□□□□ 0.41
NEFM-205ENST00000521540 ADGRF5Q8IZF2 1346 aa17.63■□□□□ 0.41
NEFM-205ENST00000521540 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
NEFM-205ENST00000521540 IDI1Q13907 227 aa17.62■□□□□ 0.41
NEFM-205ENST00000521540 UBR1Q8IWV7 1749 aa17.61■□□□□ 0.41
NEFM-205ENST00000521540 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
NEFM-205ENST00000521540 LMTK3Q96Q04 1460 aa17.6■□□□□ 0.41
NEFM-205ENST00000521540 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
NEFM-205ENST00000521540 TMEM131LA2VDJ0 1609 aa17.6■□□□□ 0.41
NEFM-205ENST00000521540 SENP3-EIF4A1A0A087X0R7 540 aa17.59■□□□□ 0.41
NEFM-205ENST00000521540 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.41
NEFM-205ENST00000521540 NGEFQ8N5V2 710 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms