RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 SLC52A1Q9NWF4 448 aa15.74■□□□□ 0.11
TRAPPC9-209ENST00000521167 IQGAP3Q86VI3 1631 aa15.74■□□□□ 0.11
TRAPPC9-209ENST00000521167 LTBP4Q8N2S1 1624 aa15.74■□□□□ 0.11
TRAPPC9-209ENST00000521167 NEURL4Q96JN8 1562 aa15.74■□□□□ 0.11
TRAPPC9-209ENST00000521167 NUP155O75694 1391 aa15.74■□□□□ 0.11
TRAPPC9-209ENST00000521167 PIK3C2BO00750 1634 aa15.73■□□□□ 0.11
TRAPPC9-209ENST00000521167 SYNMO15061 1565 aa15.72■□□□□ 0.11
TRAPPC9-209ENST00000521167 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
TRAPPC9-209ENST00000521167 NPHP4O75161 1426 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC9-209ENST00000521167 SLIT1O75093 1534 aa15.71■□□□□ 0.11
TRAPPC9-209ENST00000521167 ARHGAP23Q9P227 1491 aa15.71■□□□□ 0.1
TRAPPC9-209ENST00000521167 E9PCH4 1651 aa15.7■□□□□ 0.1
TRAPPC9-209ENST00000521167 NAIPQ13075 1403 aa15.7■□□□□ 0.1
TRAPPC9-209ENST00000521167 IQSEC2Q5JU85 1478 aa15.7■□□□□ 0.1
TRAPPC9-209ENST00000521167 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
TRAPPC9-209ENST00000521167 EID1Q9Y6B2 187 aa15.69■□□□□ 0.1
TRAPPC9-209ENST00000521167 IQGAP1P46940 1657 aa15.69■□□□□ 0.1
TRAPPC9-209ENST00000521167 ZNF335Q9H4Z2 1342 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC9-209ENST00000521167 TMEM2Q9UHN6 1383 aa15.68■□□□□ 0.1
TRAPPC9-209ENST00000521167 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
TRAPPC9-209ENST00000521167 SCAF11Q99590 1463 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-209ENST00000521167 LTKP29376 864 aa15.67■□□□□ 0.1
TRAPPC9-209ENST00000521167 MYO5BQ9ULV0 1848 aa15.66■□□□□ 0.1
TRAPPC9-209ENST00000521167 ADGRB3O60242 1522 aa15.65■□□□□ 0.1
TRAPPC9-209ENST00000521167 HDGFP51858 240 aaKnown RBP15.63■□□□□ 0.09
TRAPPC9-209ENST00000521167 CPS1P31327 1500 aa15.63■□□□□ 0.09
TRAPPC9-209ENST00000521167 TMEM131LA2VDJ0 1609 aa15.62■□□□□ 0.09
TRAPPC9-209ENST00000521167 SPHKAPQ2M3C7 1700 aa15.61■□□□□ 0.09
TRAPPC9-209ENST00000521167 TRIM52Q96A61 297 aa15.6■□□□□ 0.09
TRAPPC9-209ENST00000521167 ACIN1Q9UKV3 1341 aaKnown RBP15.6■□□□□ 0.09
TRAPPC9-209ENST00000521167 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.08
TRAPPC9-209ENST00000521167 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.58■□□□□ 0.08
TRAPPC9-209ENST00000521167 STRCP1A6NGW2 1772 aa15.57■□□□□ 0.08
TRAPPC9-209ENST00000521167 ZFYVE9O95405 1425 aa15.57■□□□□ 0.08
TRAPPC9-209ENST00000521167 RIMS2Q9UQ26 1411 aa15.57■□□□□ 0.08
TRAPPC9-209ENST00000521167 KIF1BO60333 1816 aa15.54■□□□□ 0.08
TRAPPC9-209ENST00000521167 PLEKHG1Q9ULL1 1385 aa15.54■□□□□ 0.08
TRAPPC9-209ENST00000521167 UBAP1LF5GYI3 381 aa15.54■□□□□ 0.08
TRAPPC9-209ENST00000521167 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC9-209ENST00000521167 BCANQ96GW7 911 aa15.53■□□□□ 0.08
TRAPPC9-209ENST00000521167 TRPM2O94759 1503 aa15.53■□□□□ 0.08
TRAPPC9-209ENST00000521167 KCNA6P17658 529 aa15.52■□□□□ 0.08
TRAPPC9-209ENST00000521167 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
TRAPPC9-209ENST00000521167 TOM1O60784 492 aa15.51■□□□□ 0.07
TRAPPC9-209ENST00000521167 SLC26A8Q96RN1 970 aa15.51■□□□□ 0.07
TRAPPC9-209ENST00000521167 LRRC7Q96NW7 1537 aa15.51■□□□□ 0.07
TRAPPC9-209ENST00000521167 CLTCL1P53675 1640 aa15.5■□□□□ 0.07
TRAPPC9-209ENST00000521167 TBX22Q9Y458 520 aa15.5■□□□□ 0.07
TRAPPC9-209ENST00000521167 CHD2O14647 1828 aaKnown RBP15.5■□□□□ 0.07
TRAPPC9-209ENST00000521167 MPHOSPH9Q99550 1183 aa15.49■□□□□ 0.07
TRAPPC9-209ENST00000521167 ZBTB12Q9Y330 459 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC9-209ENST00000521167 ZNF326Q5BKZ1 582 aaKnown RBP15.48■□□□□ 0.07
TRAPPC9-209ENST00000521167 XIRP1Q702N8 1843 aaKnown RBP15.47■□□□□ 0.07
TRAPPC9-209ENST00000521167 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC9-209ENST00000521167 RBM42Q9BTD8 480 aaKnown RBP15.46■□□□□ 0.07
TRAPPC9-209ENST00000521167 DIP2AQ14689 1571 aa15.45■□□□□ 0.06
TRAPPC9-209ENST00000521167 NWD1Q149M9 1564 aa15.45■□□□□ 0.06
TRAPPC9-209ENST00000521167 HRCP23327 699 aa15.45■□□□□ 0.06
TRAPPC9-209ENST00000521167 PROSER2Q86WR7 435 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC9-209ENST00000521167 PIK3R4Q99570 1358 aa15.45■□□□□ 0.06
TRAPPC9-209ENST00000521167 RPGRIP1LQ68CZ1 1315 aa15.44■□□□□ 0.06
TRAPPC9-209ENST00000521167 ADAMTS13Q76LX8 1427 aa15.44■□□□□ 0.06
TRAPPC9-209ENST00000521167 NKTRP30414 1462 aaKnown RBP15.44■□□□□ 0.06
TRAPPC9-209ENST00000521167 RAB3GAP2Q9H2M9 1393 aa15.43■□□□□ 0.06
TRAPPC9-209ENST00000521167 NEXMIFQ5QGS0 1516 aa15.42■□□□□ 0.06
TRAPPC9-209ENST00000521167 SETBP1Q9Y6X0 1596 aa15.41■□□□□ 0.06
TRAPPC9-209ENST00000521167 TMEM94Q12767 1356 aa15.41■□□□□ 0.06
TRAPPC9-209ENST00000521167 VGFO15240 615 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC9-209ENST00000521167 ALKQ9UM73 1620 aa15.4■□□□□ 0.06
TRAPPC9-209ENST00000521167 PIP4K2BP78356 416 aa15.4■□□□□ 0.06
TRAPPC9-209ENST00000521167 CCDC144AA2RUR9 1427 aa15.4■□□□□ 0.06
TRAPPC9-209ENST00000521167 NRXN3Q9Y4C0 1643 aa15.39■□□□□ 0.05
TRAPPC9-209ENST00000521167 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
TRAPPC9-209ENST00000521167 PPLO60437 1756 aa15.39■□□□□ 0.05
TRAPPC9-209ENST00000521167 AMOTL2Q9Y2J4 779 aa15.37■□□□□ 0.05
TRAPPC9-209ENST00000521167 MSH6P52701 1360 aa15.35■□□□□ 0.05
TRAPPC9-209ENST00000521167 SPATA31E1Q6ZUB1 1445 aa15.34■□□□□ 0.05
TRAPPC9-209ENST00000521167 HSPA1LP34931 641 aa15.34■□□□□ 0.05
TRAPPC9-209ENST00000521167 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-209ENST00000521167 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
TRAPPC9-209ENST00000521167 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
TRAPPC9-209ENST00000521167 METP08581 1390 aa15.33■□□□□ 0.04
TRAPPC9-209ENST00000521167 ANKRD30BQ9BXX2 1392 aa15.33■□□□□ 0.04
TRAPPC9-209ENST00000521167 FAM135BQ49AJ0 1406 aa15.33■□□□□ 0.04
TRAPPC9-209ENST00000521167 XRN1Q8IZH2 1706 aaKnown RBP15.32■□□□□ 0.04
TRAPPC9-209ENST00000521167 IFT172Q9UG01 1749 aa15.32■□□□□ 0.04
TRAPPC9-209ENST00000521167 C19orf44Q9H6X5 657 aa15.31■□□□□ 0.04
TRAPPC9-209ENST00000521167 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-209ENST00000521167 C14orf37Q86TY3 774 aa15.3■□□□□ 0.04
TRAPPC9-209ENST00000521167 SLAIN2Q9P270 581 aa15.3■□□□□ 0.04
TRAPPC9-209ENST00000521167 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-209ENST00000521167 CADPS2Q86UW7 1296 aa15.28■□□□□ 0.04
TRAPPC9-209ENST00000521167 ADGRF5Q8IZF2 1346 aa15.27■□□□□ 0.04
TRAPPC9-209ENST00000521167 ATF3P18847 181 aa15.27■□□□□ 0.04
TRAPPC9-209ENST00000521167 ROBO1Q9Y6N7 1651 aa15.26■□□□□ 0.03
TRAPPC9-209ENST00000521167 DCCP43146 1447 aa15.25■□□□□ 0.03
TRAPPC9-209ENST00000521167 PRAG1Q86YV5 1406 aa15.25■□□□□ 0.03
TRAPPC9-209ENST00000521167 PTCH1Q13635 1447 aa15.24■□□□□ 0.03
TRAPPC9-209ENST00000521167 STAC3Q96MF2 364 aa15.23■□□□□ 0.03
TRAPPC9-209ENST00000521167 DISP3Q9P2K9 1392 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms