RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 PPP1R15AO75807 674 aaPredicted RBP24.05■■□□□ 1.44
CLN8-205ENST00000520991 ALKQ9UM73 1620 aa24.05■■□□□ 1.44
CLN8-205ENST00000520991 RIMS2Q9UQ26 1411 aa24.04■■□□□ 1.44
CLN8-205ENST00000520991 ZFYVE9O95405 1425 aa24.03■■□□□ 1.44
CLN8-205ENST00000520991 HDGFP51858 240 aaKnown RBP24.03■■□□□ 1.44
CLN8-205ENST00000520991 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
CLN8-205ENST00000520991 KCNA6P17658 529 aa24■■□□□ 1.43
CLN8-205ENST00000520991 PLEKHG1Q9ULL1 1385 aa23.99■■□□□ 1.43
CLN8-205ENST00000520991 XIRP1Q702N8 1843 aaKnown RBP23.98■■□□□ 1.43
CLN8-205ENST00000520991 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.98■■□□□ 1.43
CLN8-205ENST00000520991 TMEM94Q12767 1356 aa23.97■■□□□ 1.43
CLN8-205ENST00000520991 ILDR2Q71H61 639 aa23.95■■□□□ 1.42
CLN8-205ENST00000520991 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.42
CLN8-205ENST00000520991 NKTRP30414 1462 aaKnown RBP23.95■■□□□ 1.42
CLN8-205ENST00000520991 NWD1Q149M9 1564 aa23.95■■□□□ 1.42
CLN8-205ENST00000520991 NAIPQ13075 1403 aa23.94■■□□□ 1.42
CLN8-205ENST00000520991 SPHKAPQ2M3C7 1700 aa23.93■■□□□ 1.42
CLN8-205ENST00000520991 NUTM2DQ5VT03 806 aaPredicted RBP23.93■■□□□ 1.42
CLN8-205ENST00000520991 RBM33Q96EV2 1170 aaKnown RBP23.9■■□□□ 1.42
CLN8-205ENST00000520991 TBX22Q9Y458 520 aa23.88■■□□□ 1.41
CLN8-205ENST00000520991 MED1Q15648 1581 aaPredicted RBP23.88■■□□□ 1.41
CLN8-205ENST00000520991 HFM1A2PYH4 1435 aa23.87■■□□□ 1.41
CLN8-205ENST00000520991 CHD2O14647 1828 aaKnown RBP23.87■■□□□ 1.41
CLN8-205ENST00000520991 DIP2AQ14689 1571 aa23.87■■□□□ 1.41
CLN8-205ENST00000520991 TRIM52Q96A61 297 aa23.85■■□□□ 1.41
CLN8-205ENST00000520991 MSH6P52701 1360 aa23.85■■□□□ 1.41
CLN8-205ENST00000520991 ADAMTS13Q76LX8 1427 aa23.85■■□□□ 1.41
CLN8-205ENST00000520991 ZNF326Q5BKZ1 582 aaKnown RBP23.84■■□□□ 1.41
CLN8-205ENST00000520991 TRPM2O94759 1503 aa23.83■■□□□ 1.41
CLN8-205ENST00000520991 FAM135BQ49AJ0 1406 aa23.82■■□□□ 1.4
CLN8-205ENST00000520991 CLTCL1P53675 1640 aa23.81■■□□□ 1.4
CLN8-205ENST00000520991 PIK3R4Q99570 1358 aa23.81■■□□□ 1.4
CLN8-205ENST00000520991 SOCS7O14512 581 aa23.79■■□□□ 1.4
CLN8-205ENST00000520991 C14orf37Q86TY3 774 aa23.78■■□□□ 1.4
CLN8-205ENST00000520991 ROBO1Q9Y6N7 1651 aa23.78■■□□□ 1.4
CLN8-205ENST00000520991 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
CLN8-205ENST00000520991 SLC4A1APQ9BWU0 796 aaKnown RBP23.77■■□□□ 1.4
CLN8-205ENST00000520991 NCOA3Q9Y6Q9 1424 aa23.75■■□□□ 1.39
CLN8-205ENST00000520991 KIF1BO60333 1816 aa23.75■■□□□ 1.39
CLN8-205ENST00000520991 SETBP1Q9Y6X0 1596 aa23.75■■□□□ 1.39
CLN8-205ENST00000520991 SLAIN2Q9P270 581 aa23.74■■□□□ 1.39
CLN8-205ENST00000520991 AMOTL2Q9Y2J4 779 aa23.74■■□□□ 1.39
CLN8-205ENST00000520991 NRXN3Q9Y4C0 1643 aa23.73■■□□□ 1.39
CLN8-205ENST00000520991 NEXMIFQ5QGS0 1516 aa23.73■■□□□ 1.39
CLN8-205ENST00000520991 PTPRUQ92729 1446 aa23.71■■□□□ 1.39
CLN8-205ENST00000520991 ATF3P18847 181 aa23.68■■□□□ 1.38
CLN8-205ENST00000520991 C19orf44Q9H6X5 657 aa23.68■■□□□ 1.38
CLN8-205ENST00000520991 CADPS2Q86UW7 1296 aa23.67■■□□□ 1.38
CLN8-205ENST00000520991 XRN1Q8IZH2 1706 aaKnown RBP23.67■■□□□ 1.38
CLN8-205ENST00000520991 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.67■■□□□ 1.38
CLN8-205ENST00000520991 METP08581 1390 aa23.66■■□□□ 1.38
CLN8-205ENST00000520991 PHLPP1O60346 1717 aa23.64■■□□□ 1.38
CLN8-205ENST00000520991 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
CLN8-205ENST00000520991 FOXD1Q16676 465 aa23.63■■□□□ 1.37
CLN8-205ENST00000520991 RPGRIP1LQ68CZ1 1315 aa23.61■■□□□ 1.37
CLN8-205ENST00000520991 DCCP43146 1447 aa23.6■■□□□ 1.37
CLN8-205ENST00000520991 CCDC144AA2RUR9 1427 aa23.59■■□□□ 1.37
CLN8-205ENST00000520991 MPHOSPH9Q99550 1183 aa23.59■■□□□ 1.37
CLN8-205ENST00000520991 JCADQ9P266 1359 aa23.57■■□□□ 1.36
CLN8-205ENST00000520991 PPLO60437 1756 aa23.56■■□□□ 1.36
CLN8-205ENST00000520991 COL16A1Q07092 1604 aaPredicted RBP23.56■■□□□ 1.36
CLN8-205ENST00000520991 ACIN1Q9UKV3 1341 aaKnown RBP23.55■■□□□ 1.36
CLN8-205ENST00000520991 SETD5Q9C0A6 1442 aa23.54■■□□□ 1.36
CLN8-205ENST00000520991 AHDC1Q5TGY3 1603 aaPredicted RBP23.53■■□□□ 1.36
CLN8-205ENST00000520991 ADGRL3Q9HAR2 1447 aa23.53■■□□□ 1.36
CLN8-205ENST00000520991 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
CLN8-205ENST00000520991 BRINP3Q76B58 766 aa23.52■■□□□ 1.36
CLN8-205ENST00000520991 PTCH1Q13635 1447 aa23.51■■□□□ 1.35
CLN8-205ENST00000520991 RGL3Q3MIN7 710 aa23.51■■□□□ 1.35
CLN8-205ENST00000520991 RGS17Q9UGC6 210 aaPredicted RBP23.51■■□□□ 1.35
CLN8-205ENST00000520991 NALCNQ8IZF0 1738 aa23.51■■□□□ 1.35
CLN8-205ENST00000520991 MST1RQ04912 1400 aa23.5■■□□□ 1.35
CLN8-205ENST00000520991 SPATA31E1Q6ZUB1 1445 aa23.49■■□□□ 1.35
CLN8-205ENST00000520991 ASXL1Q8IXJ9 1541 aa23.48■■□□□ 1.35
CLN8-205ENST00000520991 ROBO2Q9HCK4 1378 aa23.48■■□□□ 1.35
CLN8-205ENST00000520991 ANKRD30BQ9BXX2 1392 aa23.46■■□□□ 1.35
CLN8-205ENST00000520991 SPATA31A6Q5VVP1 1343 aa23.45■■□□□ 1.35
CLN8-205ENST00000520991 ADGRF5Q8IZF2 1346 aa23.45■■□□□ 1.35
CLN8-205ENST00000520991 RAB3GAP2Q9H2M9 1393 aa23.45■■□□□ 1.34
CLN8-205ENST00000520991 PRAG1Q86YV5 1406 aa23.44■■□□□ 1.34
CLN8-205ENST00000520991 IFT172Q9UG01 1749 aa23.44■■□□□ 1.34
CLN8-205ENST00000520991 SHPRHQ149N8 1683 aa23.43■■□□□ 1.34
CLN8-205ENST00000520991 NHSL1Q5SYE7 1610 aa23.41■■□□□ 1.34
CLN8-205ENST00000520991 MEX3CQ5U5Q3 659 aaKnown RBP23.41■■□□□ 1.34
CLN8-205ENST00000520991 LRP6O75581 1613 aa23.4■■□□□ 1.34
CLN8-205ENST00000520991 POTEAQ6S8J7 498 aa23.39■■□□□ 1.34
CLN8-205ENST00000520991 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.33
CLN8-205ENST00000520991 STK26Q9P289 416 aa23.37■■□□□ 1.33
CLN8-205ENST00000520991 PIK3C2GO75747 1445 aa23.37■■□□□ 1.33
CLN8-205ENST00000520991 DDX17Q92841 729 aaKnown RBP23.36■■□□□ 1.33
CLN8-205ENST00000520991 LRRC59Q96AG4 307 aaKnown RBP23.35■■□□□ 1.33
CLN8-205ENST00000520991 NUTM2BA6NNL0 878 aaPredicted RBP23.34■■□□□ 1.33
CLN8-205ENST00000520991 NUTM2EB1AL46 878 aaPredicted RBP23.34■■□□□ 1.33
CLN8-205ENST00000520991 NUTM2AQ8IVF1 878 aaPredicted RBP23.34■■□□□ 1.33
CLN8-205ENST00000520991 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
CLN8-205ENST00000520991 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.32
CLN8-205ENST00000520991 TECPR2O15040 1411 aa23.32■■□□□ 1.32
CLN8-205ENST00000520991 ORAI2Q96SN7 254 aa23.32■■□□□ 1.32
CLN8-205ENST00000520991 CDC42BPGQ6DT37 1551 aa23.31■■□□□ 1.32
CLN8-205ENST00000520991 KNDC1Q76NI1 1749 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms