RNA–Protein interactions for RNA: ENST00000520866.5

NSMCE2-208, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 2 BASIC

Gene NSMCE2, Length 1,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-208ENST00000520866 COL17A1Q9UMD9 1497 aaPredicted RBP13.94□□□□□ -0.18
NSMCE2-208ENST00000520866 ZCCHC11Q5TAX3 1644 aaKnown RBP13.94□□□□□ -0.18
NSMCE2-208ENST00000520866 E2F4Q16254 413 aa13.94□□□□□ -0.18
NSMCE2-208ENST00000520866 BCL2L12Q9HB09 334 aa13.94□□□□□ -0.18
NSMCE2-208ENST00000520866 ARIH1Q9Y4X5 557 aaPredicted RBP13.94□□□□□ -0.18
NSMCE2-208ENST00000520866 MAGI3Q5TCQ9 1506 aa13.94□□□□□ -0.18
NSMCE2-208ENST00000520866 DPYSL4O14531 572 aa13.93□□□□□ -0.18
NSMCE2-208ENST00000520866 CD109Q6YHK3 1445 aa13.92□□□□□ -0.18
NSMCE2-208ENST00000520866 KCNH8Q96L42 1107 aa13.92□□□□□ -0.18
NSMCE2-208ENST00000520866 TSHZ2Q9NRE2 1034 aa13.92□□□□□ -0.18
NSMCE2-208ENST00000520866 TK2O00142 265 aa13.91□□□□□ -0.18
NSMCE2-208ENST00000520866 ZDHHC16Q969W1 377 aa13.9□□□□□ -0.18
NSMCE2-208ENST00000520866 PHLDB1Q86UU1 1377 aa13.9□□□□□ -0.18
NSMCE2-208ENST00000520866 HECW2Q9P2P5 1572 aa13.9□□□□□ -0.18
NSMCE2-208ENST00000520866 CFAP43Q8NDM7 1665 aa13.89□□□□□ -0.19
NSMCE2-208ENST00000520866 SPDYE16A6NNV3 312 aaPredicted RBP13.88□□□□□ -0.19
NSMCE2-208ENST00000520866 PHF14O94880 888 aa13.88□□□□□ -0.19
NSMCE2-208ENST00000520866 PSEN2P49810 448 aa13.88□□□□□ -0.19
NSMCE2-208ENST00000520866 PLCB2Q00722 1185 aa13.87□□□□□ -0.19
NSMCE2-208ENST00000520866 PDIA6Q15084 440 aa13.87□□□□□ -0.19
NSMCE2-208ENST00000520866 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
NSMCE2-208ENST00000520866 DMRTA1Q5VZB9 504 aa13.86□□□□□ -0.19
NSMCE2-208ENST00000520866 ADGRD1Q6QNK2 874 aa13.86□□□□□ -0.19
NSMCE2-208ENST00000520866 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
NSMCE2-208ENST00000520866 KCNK17Q96T54 332 aa13.86□□□□□ -0.19
NSMCE2-208ENST00000520866 PCDHGA10Q9Y5H3 936 aa13.86□□□□□ -0.19
NSMCE2-208ENST00000520866 PTPREP23469 700 aa13.85□□□□□ -0.19
NSMCE2-208ENST00000520866 ABCA8O94911 1581 aa13.84□□□□□ -0.19
NSMCE2-208ENST00000520866 TYW1BQ6NUM6 668 aa13.84□□□□□ -0.19
NSMCE2-208ENST00000520866 EPAS1Q99814 870 aa13.84□□□□□ -0.19
NSMCE2-208ENST00000520866 SLC4A5Q9BY07 1137 aa13.84□□□□□ -0.19
NSMCE2-208ENST00000520866 CTTNBP2Q8WZ74 1663 aa13.84□□□□□ -0.19
NSMCE2-208ENST00000520866 ARAP3Q8WWN8 1544 aa13.84□□□□□ -0.19
NSMCE2-208ENST00000520866 RNF166Q96A37 237 aaPredicted RBP13.83□□□□□ -0.2
NSMCE2-208ENST00000520866 ADAM33Q9BZ11 813 aa13.83□□□□□ -0.2
NSMCE2-208ENST00000520866 HRO43593 1189 aa13.79□□□□□ -0.2
NSMCE2-208ENST00000520866 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
NSMCE2-208ENST00000520866 PRXQ9BXM0 1461 aa13.78□□□□□ -0.2
NSMCE2-208ENST00000520866 VPS9D1Q9Y2B5 631 aa13.77□□□□□ -0.21
NSMCE2-208ENST00000520866 NEO1Q92859 1461 aa13.76□□□□□ -0.21
NSMCE2-208ENST00000520866 ZBED2Q9BTP6 218 aa13.75□□□□□ -0.21
NSMCE2-208ENST00000520866 PPP1R3GB7ZBB8 358 aa13.74□□□□□ -0.21
NSMCE2-208ENST00000520866 ABCA9Q8IUA7 1624 aa13.73□□□□□ -0.21
NSMCE2-208ENST00000520866 DDX12PQ92771 950 aa13.73□□□□□ -0.21
NSMCE2-208ENST00000520866 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
NSMCE2-208ENST00000520866 ATP10BO94823 1461 aa13.73□□□□□ -0.21
NSMCE2-208ENST00000520866 KIF21BO75037 1637 aa13.72□□□□□ -0.21
NSMCE2-208ENST00000520866 PTPRMP28827 1452 aa13.72□□□□□ -0.21
NSMCE2-208ENST00000520866 C6orf132Q5T0Z8 1188 aa13.69□□□□□ -0.22
NSMCE2-208ENST00000520866 EN1Q05925 392 aaPredicted RBP13.68□□□□□ -0.22
NSMCE2-208ENST00000520866 STAC3Q96MF2 364 aa13.68□□□□□ -0.22
NSMCE2-208ENST00000520866 ADAMTSL3P82987 1691 aa13.68□□□□□ -0.22
NSMCE2-208ENST00000520866 ARID4BQ4LE39 1312 aaPredicted RBP13.67□□□□□ -0.22
NSMCE2-208ENST00000520866 POGZQ7Z3K3 1410 aa13.67□□□□□ -0.22
NSMCE2-208ENST00000520866 BHMG1C9JSJ3 638 aaPredicted RBP13.67□□□□□ -0.22
NSMCE2-208ENST00000520866 NBR1Q14596 966 aa13.67□□□□□ -0.22
NSMCE2-208ENST00000520866 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
NSMCE2-208ENST00000520866 KCNV2Q8TDN2 545 aa13.67□□□□□ -0.22
NSMCE2-208ENST00000520866 RAPGEF3O95398 923 aa13.66□□□□□ -0.22
NSMCE2-208ENST00000520866 COL9A1P20849 921 aa13.66□□□□□ -0.22
NSMCE2-208ENST00000520866 RAPGEF6Q8TEU7 1601 aa13.65□□□□□ -0.22
NSMCE2-208ENST00000520866 PCF11O94913 1555 aaKnown RBP13.65□□□□□ -0.22
NSMCE2-208ENST00000520866 SAMD9Q5K651 1589 aa13.64□□□□□ -0.23
NSMCE2-208ENST00000520866 PLEKHD1A6NEE1 506 aa13.64□□□□□ -0.23
NSMCE2-208ENST00000520866 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
NSMCE2-208ENST00000520866 EEA1Q15075 1411 aa13.64□□□□□ -0.23
NSMCE2-208ENST00000520866 CFAP74Q9C0B2 1584 aa13.63□□□□□ -0.23
NSMCE2-208ENST00000520866 DENND4BO75064 1496 aaPredicted RBP13.63□□□□□ -0.23
NSMCE2-208ENST00000520866 ARID3CA6NKF2 412 aa13.63□□□□□ -0.23
NSMCE2-208ENST00000520866 RBM33Q96EV2 1170 aaKnown RBP13.63□□□□□ -0.23
NSMCE2-208ENST00000520866 BCORL1Q5H9F3 1711 aa13.63□□□□□ -0.23
NSMCE2-208ENST00000520866 NBPF3Q9H094 633 aa13.62□□□□□ -0.23
NSMCE2-208ENST00000520866 RABGEF1Q9UJ41 708 aa13.62□□□□□ -0.23
NSMCE2-208ENST00000520866 ARHGEF40Q8TER5 1519 aa13.62□□□□□ -0.23
NSMCE2-208ENST00000520866 AKNAQ7Z591 1439 aa13.62□□□□□ -0.23
NSMCE2-208ENST00000520866 FANCAO15360 1455 aa13.61□□□□□ -0.23
NSMCE2-208ENST00000520866 MAGI2Q86UL8 1455 aa13.61□□□□□ -0.23
NSMCE2-208ENST00000520866 MAP3K7O43318 606 aa13.61□□□□□ -0.23
NSMCE2-208ENST00000520866 FHOD3Q2V2M9 1422 aa13.61□□□□□ -0.23
NSMCE2-208ENST00000520866 GRXCR2A6NFK2 248 aa13.6□□□□□ -0.23
NSMCE2-208ENST00000520866 NUP153P49790 1475 aaKnown RBP13.6□□□□□ -0.23
NSMCE2-208ENST00000520866 OSBPP22059 807 aa13.59□□□□□ -0.23
NSMCE2-208ENST00000520866 LMTK3Q96Q04 1460 aa13.59□□□□□ -0.23
NSMCE2-208ENST00000520866 MADDQ8WXG6 1647 aa13.58□□□□□ -0.24
NSMCE2-208ENST00000520866 PROX2Q3B8N5 592 aa13.58□□□□□ -0.24
NSMCE2-208ENST00000520866 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
NSMCE2-208ENST00000520866 HCSTQ9UBK5 93 aa13.58□□□□□ -0.24
NSMCE2-208ENST00000520866 EFCAB5A4FU69 1503 aa13.58□□□□□ -0.24
NSMCE2-208ENST00000520866 FRMPD1Q5SYB0 1578 aa13.58□□□□□ -0.24
NSMCE2-208ENST00000520866 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
NSMCE2-208ENST00000520866 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
NSMCE2-208ENST00000520866 ZMYM4Q5VZL5 1548 aa13.57□□□□□ -0.24
NSMCE2-208ENST00000520866 TSR1Q2NL82 804 aaKnown RBP13.56□□□□□ -0.24
NSMCE2-208ENST00000520866 TRIM6-TRIM34B2RNG4 842 aa13.55□□□□□ -0.24
NSMCE2-208ENST00000520866 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
NSMCE2-208ENST00000520866 LAPTM4BQ86VI4 370 aa13.54□□□□□ -0.24
NSMCE2-208ENST00000520866 ZFYVE16Q7Z3T8 1539 aa13.54□□□□□ -0.24
NSMCE2-208ENST00000520866 KCTD12Q96CX2 325 aaKnown RBP13.53□□□□□ -0.24
NSMCE2-208ENST00000520866 RICTORQ6R327 1708 aa13.53□□□□□ -0.24
NSMCE2-208ENST00000520866 KIAA1468Q9P260 1216 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms