RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
CTNNA1-225ENST00000520865 PSDA5PKW4 1024 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-225ENST00000520865 CD46P15529 392 aa10.36□□□□□ -0.75
CTNNA1-225ENST00000520865 POTEEQ6S8J3 1075 aa10.36□□□□□ -0.75
CTNNA1-225ENST00000520865 SPIRE2Q8WWL2 714 aa10.36□□□□□ -0.75
CTNNA1-225ENST00000520865 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
CTNNA1-225ENST00000520865 KCNK17Q96T54 332 aa10.35□□□□□ -0.75
CTNNA1-225ENST00000520865 ARID3CA6NKF2 412 aa10.34□□□□□ -0.75
CTNNA1-225ENST00000520865 CLK2P49760 499 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-225ENST00000520865 TMEM134Q9H6X4 195 aa10.33□□□□□ -0.76
CTNNA1-225ENST00000520865 ZEB1P37275 1124 aaPredicted RBP10.32□□□□□ -0.76
CTNNA1-225ENST00000520865 PSEN2P49810 448 aa10.32□□□□□ -0.76
CTNNA1-225ENST00000520865 HOMEZQ8IX15 550 aa10.32□□□□□ -0.76
CTNNA1-225ENST00000520865 POM121Q96HA1 1249 aa10.32□□□□□ -0.76
CTNNA1-225ENST00000520865 DDX11L8A8MPP1 907 aa10.31□□□□□ -0.76
CTNNA1-225ENST00000520865 NBPF26B4DH59 902 aa10.31□□□□□ -0.76
CTNNA1-225ENST00000520865 DNAJB2P25686 324 aa10.31□□□□□ -0.76
CTNNA1-225ENST00000520865 ZBED2Q9BTP6 218 aa10.31□□□□□ -0.76
CTNNA1-225ENST00000520865 SNPHO15079 494 aa10.3□□□□□ -0.76
CTNNA1-225ENST00000520865 ERCC6Q03468 1493 aa10.3□□□□□ -0.76
CTNNA1-225ENST00000520865 MOXD2PA6NHM9 499 aa10.29□□□□□ -0.76
CTNNA1-225ENST00000520865 RFC5P40937 340 aa10.29□□□□□ -0.76
CTNNA1-225ENST00000520865 RIC3Q7Z5B4 369 aa10.29□□□□□ -0.76
CTNNA1-225ENST00000520865 PACS2Q86VP3 889 aa10.29□□□□□ -0.76
CTNNA1-225ENST00000520865 SNRKQ9NRH2 765 aa10.29□□□□□ -0.76
CTNNA1-225ENST00000520865 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
CTNNA1-225ENST00000520865 A6NJR5 290 aa10.28□□□□□ -0.76
CTNNA1-225ENST00000520865 UBTFP17480 764 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-225ENST00000520865 NDUFV2P19404 249 aa10.28□□□□□ -0.76
CTNNA1-225ENST00000520865 SPTLC1O15269 473 aa10.27□□□□□ -0.77
CTNNA1-225ENST00000520865 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.77
CTNNA1-225ENST00000520865 RSBN1LQ6PCB5 846 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-225ENST00000520865 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-225ENST00000520865 PCDHB15Q9Y5E8 787 aa10.27□□□□□ -0.77
CTNNA1-225ENST00000520865 NCAPD3P42695 1498 aa10.26□□□□□ -0.77
CTNNA1-225ENST00000520865 QPCTQ16769 361 aa10.26□□□□□ -0.77
CTNNA1-225ENST00000520865 PPP2R2DQ66LE6 453 aa10.26□□□□□ -0.77
CTNNA1-225ENST00000520865 AXIN2Q9Y2T1 843 aa10.26□□□□□ -0.77
CTNNA1-225ENST00000520865 APBB1O00213 710 aa10.25□□□□□ -0.77
CTNNA1-225ENST00000520865 TRAK2O60296 914 aa10.25□□□□□ -0.77
CTNNA1-225ENST00000520865 SLC10A3P09131 477 aa10.25□□□□□ -0.77
CTNNA1-225ENST00000520865 CSPP1Q1MSJ5 1256 aa10.24□□□□□ -0.77
CTNNA1-225ENST00000520865 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-225ENST00000520865 SULF1Q8IWU6 871 aa10.24□□□□□ -0.77
CTNNA1-225ENST00000520865 FNBP4Q8N3X1 1017 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-225ENST00000520865 ARID3AQ99856 593 aa10.24□□□□□ -0.77
CTNNA1-225ENST00000520865 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-225ENST00000520865 CUX2O14529 1486 aa10.23□□□□□ -0.77
CTNNA1-225ENST00000520865 ATAD2BQ9ULI0 1458 aa10.23□□□□□ -0.77
CTNNA1-225ENST00000520865 HLA-CQ95604 372 aa10.23□□□□□ -0.77
CTNNA1-225ENST00000520865 DIXDC1Q155Q3 683 aa10.22□□□□□ -0.77
CTNNA1-225ENST00000520865 TUSC1Q2TAM9 212 aa10.22□□□□□ -0.77
CTNNA1-225ENST00000520865 RTL5Q5HYW3 569 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-225ENST00000520865 SWT1Q5T5J6 900 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-225ENST00000520865 LILRB3O75022 631 aa10.21□□□□□ -0.77
CTNNA1-225ENST00000520865 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
CTNNA1-225ENST00000520865 RDH13Q8NBN7 331 aa10.21□□□□□ -0.77
CTNNA1-225ENST00000520865 COG6Q9Y2V7 657 aa10.21□□□□□ -0.77
CTNNA1-225ENST00000520865 SPDYE5A6NIY4 337 aa10.2□□□□□ -0.78
CTNNA1-225ENST00000520865 ARHGAP33O14559 1287 aa10.2□□□□□ -0.78
CTNNA1-225ENST00000520865 ST18O60284 1047 aa10.2□□□□□ -0.78
CTNNA1-225ENST00000520865 GCGRP47871 477 aa10.2□□□□□ -0.78
CTNNA1-225ENST00000520865 GUCA2AQ02747 115 aa10.2□□□□□ -0.78
CTNNA1-225ENST00000520865 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
CTNNA1-225ENST00000520865 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
CTNNA1-225ENST00000520865 PCDHGC3Q9UN70 934 aa10.2□□□□□ -0.78
CTNNA1-225ENST00000520865 ERBB3P21860 1342 aa10.19□□□□□ -0.78
CTNNA1-225ENST00000520865 POTEB3A0JP26 581 aa10.19□□□□□ -0.78
CTNNA1-225ENST00000520865 POTEBQ6S5H4 581 aa10.19□□□□□ -0.78
CTNNA1-225ENST00000520865 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
CTNNA1-225ENST00000520865 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
CTNNA1-225ENST00000520865 RABGEF1Q9UJ41 708 aa10.19□□□□□ -0.78
CTNNA1-225ENST00000520865 NESP48681 1621 aa10.18□□□□□ -0.78
CTNNA1-225ENST00000520865 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
CTNNA1-225ENST00000520865 KDM4AO75164 1064 aa10.18□□□□□ -0.78
CTNNA1-225ENST00000520865 PROSER2Q86WR7 435 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-225ENST00000520865 SLC4A5Q9BY07 1137 aa10.18□□□□□ -0.78
CTNNA1-225ENST00000520865 SMARCA4P51532 1647 aa10.18□□□□□ -0.78
CTNNA1-225ENST00000520865 HOXA2O43364 376 aa10.17□□□□□ -0.78
CTNNA1-225ENST00000520865 VPS9D1Q9Y2B5 631 aa10.17□□□□□ -0.78
CTNNA1-225ENST00000520865 GJA5P36382 358 aa10.16□□□□□ -0.78
CTNNA1-225ENST00000520865 LHX8Q68G74 356 aa10.16□□□□□ -0.78
CTNNA1-225ENST00000520865 ZNF777Q9ULD5 760 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-225ENST00000520865 HMGXB3Q12766 1538 aa10.16□□□□□ -0.78
CTNNA1-225ENST00000520865 TMEM259Q4ZIN3 620 aa10.15□□□□□ -0.78
CTNNA1-225ENST00000520865 CCDC82Q8N4S0 544 aa10.15□□□□□ -0.78
CTNNA1-225ENST00000520865 BAZ1BQ9UIG0 1483 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-225ENST00000520865 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
CTNNA1-225ENST00000520865 FAM205CA6NFA0 338 aa10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 BHMG1C9JSJ3 638 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 AP1G2O75843 785 aa10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 FDX1P10109 184 aa10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 EMP3P54852 163 aa10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 SAMD7Q7Z3H4 446 aa10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 PCGF6Q9BYE7 350 aa10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 BAZ1AQ9NRL2 1556 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-225ENST00000520865 PPARGC1BQ86YN6 1023 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-225ENST00000520865 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms