RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 SLF2Q8IX21 1173 aa8.01□□□□□ -1.13
TRAPPC13-212ENST00000520525 NECTIN2Q92692 538 aa8.01□□□□□ -1.13
TRAPPC13-212ENST00000520525 SEMA3EO15041 775 aa8□□□□□ -1.13
TRAPPC13-212ENST00000520525 EMID1Q96A84 441 aaPredicted RBP8□□□□□ -1.13
TRAPPC13-212ENST00000520525 SLC19A1P41440 591 aa7.99□□□□□ -1.13
TRAPPC13-212ENST00000520525 RNF223E7ERA6 249 aa7.98□□□□□ -1.13
TRAPPC13-212ENST00000520525 EYA1Q99502 592 aa7.98□□□□□ -1.13
TRAPPC13-212ENST00000520525 MYT1Q01538 1121 aa7.97□□□□□ -1.13
TRAPPC13-212ENST00000520525 PADI6Q6TGC4 694 aa7.97□□□□□ -1.13
TRAPPC13-212ENST00000520525 DGAT1O75907 488 aa7.96□□□□□ -1.14
TRAPPC13-212ENST00000520525 POTECB2RU33 542 aa7.95□□□□□ -1.14
TRAPPC13-212ENST00000520525 SPRYD7Q5W111 196 aa7.95□□□□□ -1.14
TRAPPC13-212ENST00000520525 PCDHB3Q9Y5E6 796 aa7.95□□□□□ -1.14
TRAPPC13-212ENST00000520525 TESPA1A2RU30 521 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC13-212ENST00000520525 PTGDRQ13258 359 aa7.94□□□□□ -1.14
TRAPPC13-212ENST00000520525 BLOC1S3Q6QNY0 202 aa7.94□□□□□ -1.14
TRAPPC13-212ENST00000520525 SLC4A3P48751 1232 aa7.93□□□□□ -1.14
TRAPPC13-212ENST00000520525 PRR20EP86478 221 aa7.93□□□□□ -1.14
TRAPPC13-212ENST00000520525 PRR20CP86479 221 aa7.93□□□□□ -1.14
TRAPPC13-212ENST00000520525 PRR20DP86480 221 aa7.93□□□□□ -1.14
TRAPPC13-212ENST00000520525 PRR20BP86481 221 aa7.93□□□□□ -1.14
TRAPPC13-212ENST00000520525 PRR20AP86496 221 aa7.93□□□□□ -1.14
TRAPPC13-212ENST00000520525 PKDCCQ504Y2 493 aa7.93□□□□□ -1.14
TRAPPC13-212ENST00000520525 ZNF598Q86UK7 904 aaKnown RBP7.93□□□□□ -1.14
TRAPPC13-212ENST00000520525 PRR14Q9BWN1 585 aa7.93□□□□□ -1.14
TRAPPC13-212ENST00000520525 LIAT1Q6ZQX7 453 aa7.92□□□□□ -1.14
TRAPPC13-212ENST00000520525 VSIG10Q8N0Z9 540 aa7.92□□□□□ -1.14
TRAPPC13-212ENST00000520525 ANKLE1Q8NAG6 615 aa7.91□□□□□ -1.14
TRAPPC13-212ENST00000520525 PPEF1O14829 653 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC13-212ENST00000520525 NUTM2FA1L443 756 aa7.89□□□□□ -1.15
TRAPPC13-212ENST00000520525 TLL1O43897 1013 aa7.89□□□□□ -1.15
TRAPPC13-212ENST00000520525 GDF9O60383 454 aa7.89□□□□□ -1.15
TRAPPC13-212ENST00000520525 S1PR4O95977 384 aa7.88□□□□□ -1.15
TRAPPC13-212ENST00000520525 RBM26Q5T8P6 1007 aaKnown RBP7.88□□□□□ -1.15
TRAPPC13-212ENST00000520525 ACTN4O43707 911 aaKnown RBP7.87□□□□□ -1.15
TRAPPC13-212ENST00000520525 ZNF697Q5TEC3 545 aa7.87□□□□□ -1.15
TRAPPC13-212ENST00000520525 GPR37O15354 613 aa7.86□□□□□ -1.15
TRAPPC13-212ENST00000520525 FCHSD2O94868 740 aa7.86□□□□□ -1.15
TRAPPC13-212ENST00000520525 DNAJB2P25686 324 aa7.86□□□□□ -1.15
TRAPPC13-212ENST00000520525 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC13-212ENST00000520525 ADGRG1Q9Y653 693 aa7.86□□□□□ -1.15
TRAPPC13-212ENST00000520525 FAM187AA6NFU0 413 aa7.85□□□□□ -1.15
TRAPPC13-212ENST00000520525 TNFRSF10AO00220 468 aa7.85□□□□□ -1.15
TRAPPC13-212ENST00000520525 TREML4Q6UXN2 200 aa7.85□□□□□ -1.15
TRAPPC13-212ENST00000520525 TMEM134Q9H6X4 195 aa7.85□□□□□ -1.15
TRAPPC13-212ENST00000520525 FAM161AQ3B820 660 aa7.84□□□□□ -1.15
TRAPPC13-212ENST00000520525 AAASQ9NRG9 546 aa7.84□□□□□ -1.15
TRAPPC13-212ENST00000520525 ST8SIA5O15466 376 aa7.83□□□□□ -1.16
TRAPPC13-212ENST00000520525 KMT5BQ4FZB7 885 aa7.83□□□□□ -1.16
TRAPPC13-212ENST00000520525 PLA2G2CQ5R387 149 aa7.83□□□□□ -1.16
TRAPPC13-212ENST00000520525 SMYD5Q6GMV2 418 aa7.83□□□□□ -1.16
TRAPPC13-212ENST00000520525 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
TRAPPC13-212ENST00000520525 ADH1BP00325 375 aa7.82□□□□□ -1.16
TRAPPC13-212ENST00000520525 RCCD1A6NED2 376 aa7.81□□□□□ -1.16
TRAPPC13-212ENST00000520525 CFHP08603 1231 aa7.81□□□□□ -1.16
TRAPPC13-212ENST00000520525 SLC10A3P09131 477 aa7.81□□□□□ -1.16
TRAPPC13-212ENST00000520525 FECHP22830 423 aa7.81□□□□□ -1.16
TRAPPC13-212ENST00000520525 HIC1Q14526 733 aa7.81□□□□□ -1.16
TRAPPC13-212ENST00000520525 NR1I2O75469 434 aa7.8□□□□□ -1.16
TRAPPC13-212ENST00000520525 SLC6A16Q9GZN6 736 aa7.8□□□□□ -1.16
TRAPPC13-212ENST00000520525 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
TRAPPC13-212ENST00000520525 GNPATO15228 680 aa7.79□□□□□ -1.16
TRAPPC13-212ENST00000520525 SCUBE3Q8IX30 993 aa7.79□□□□□ -1.16
TRAPPC13-212ENST00000520525 PXYLP1Q8TE99 480 aa7.78□□□□□ -1.16
TRAPPC13-212ENST00000520525 FOXC1Q12948 553 aa7.77□□□□□ -1.17
TRAPPC13-212ENST00000520525 GPIHBP1Q8IV16 184 aa7.77□□□□□ -1.17
TRAPPC13-212ENST00000520525 DACH1Q9UI36 760 aa7.77□□□□□ -1.17
TRAPPC13-212ENST00000520525 LMOD2Q6P5Q4 547 aa7.76□□□□□ -1.17
TRAPPC13-212ENST00000520525 METTL3Q86U44 580 aaKnown RBP7.76□□□□□ -1.17
TRAPPC13-212ENST00000520525 CRIPAKQ8N1N5 446 aa7.76□□□□□ -1.17
TRAPPC13-212ENST00000520525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.75□□□□□ -1.17
TRAPPC13-212ENST00000520525 AVPP01185 164 aa7.74□□□□□ -1.17
TRAPPC13-212ENST00000520525 OATP04181 439 aa7.74□□□□□ -1.17
TRAPPC13-212ENST00000520525 SPSB2Q99619 263 aa7.74□□□□□ -1.17
TRAPPC13-212ENST00000520525 TOR4AQ9NXH8 423 aa7.74□□□□□ -1.17
TRAPPC13-212ENST00000520525 RPIAP49247 311 aa7.73□□□□□ -1.17
TRAPPC13-212ENST00000520525 PUS10Q3MIT2 529 aaKnown RBP7.73□□□□□ -1.17
TRAPPC13-212ENST00000520525 WFS1O76024 890 aa7.72□□□□□ -1.17
TRAPPC13-212ENST00000520525 PHOX2BQ99453 314 aa7.72□□□□□ -1.17
TRAPPC13-212ENST00000520525 GMPR2Q9P2T1 348 aaKnown RBP7.72□□□□□ -1.17
TRAPPC13-212ENST00000520525 C11orf95C9JLR9 678 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-212ENST00000520525 AXIN1O15169 862 aa7.7□□□□□ -1.18
TRAPPC13-212ENST00000520525 CD2BP2O95400 341 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-212ENST00000520525 NLRP7Q8WX94 980 aa7.7□□□□□ -1.18
TRAPPC13-212ENST00000520525 SMCPP49901 116 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC13-212ENST00000520525 NFX1Q12986 1120 aaKnown RBP7.69□□□□□ -1.18
TRAPPC13-212ENST00000520525 CYP4X1Q8N118 509 aa7.69□□□□□ -1.18
TRAPPC13-212ENST00000520525 TULP1O00294 542 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC13-212ENST00000520525 CTC1Q2NKJ3 1217 aa7.68□□□□□ -1.18
TRAPPC13-212ENST00000520525 RSPH4AQ5TD94 716 aa7.68□□□□□ -1.18
TRAPPC13-212ENST00000520525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.68□□□□□ -1.18
TRAPPC13-212ENST00000520525 THAP11Q96EK4 314 aa7.68□□□□□ -1.18
TRAPPC13-212ENST00000520525 MAP2K5Q13163 448 aa7.67□□□□□ -1.18
TRAPPC13-212ENST00000520525 MORN1Q5T089 497 aa7.67□□□□□ -1.18
TRAPPC13-212ENST00000520525 FAM160A2Q8N612 972 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC13-212ENST00000520525 BCANQ96GW7 911 aa7.67□□□□□ -1.18
TRAPPC13-212ENST00000520525 FCF1Q9Y324 198 aaKnown RBP7.67□□□□□ -1.18
TRAPPC13-212ENST00000520525 WIPF1O43516 503 aa7.66□□□□□ -1.18
TRAPPC13-212ENST00000520525 STK17AQ9UEE5 414 aa7.66□□□□□ -1.18
TRAPPC13-212ENST00000520525 DAXXQ9UER7 740 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms