RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 TSR1Q2NL82 804 aaKnown RBP14.86□□□□□ -0.03
ERGIC1-208ENST00000520399 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
ERGIC1-208ENST00000520399 TEX35Q5T0J7 233 aa14.85□□□□□ -0.03
ERGIC1-208ENST00000520399 CCDC9Q9Y3X0 531 aaKnown RBP14.85□□□□□ -0.03
ERGIC1-208ENST00000520399 CASKIN1Q8WXD9 1431 aa14.84□□□□□ -0.03
ERGIC1-208ENST00000520399 ZKSCAN2Q63HK3 967 aa14.84□□□□□ -0.03
ERGIC1-208ENST00000520399 BRPF3Q9ULD4 1205 aa14.83□□□□□ -0.03
ERGIC1-208ENST00000520399 ST18O60284 1047 aa14.83□□□□□ -0.04
ERGIC1-208ENST00000520399 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
ERGIC1-208ENST00000520399 TPD52L1Q16890 204 aaPredicted RBP14.82□□□□□ -0.04
ERGIC1-208ENST00000520399 MINK1Q8N4C8 1332 aaPredicted RBP14.82□□□□□ -0.04
ERGIC1-208ENST00000520399 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
ERGIC1-208ENST00000520399 DDX11L8A8MPP1 907 aa14.82□□□□□ -0.04
ERGIC1-208ENST00000520399 HOMEZQ8IX15 550 aa14.82□□□□□ -0.04
ERGIC1-208ENST00000520399 TSPYL1Q9H0U9 437 aa14.82□□□□□ -0.04
ERGIC1-208ENST00000520399 NCOA2Q15596 1464 aa14.82□□□□□ -0.04
ERGIC1-208ENST00000520399 C1orf141Q5JVX7 400 aa14.81□□□□□ -0.04
ERGIC1-208ENST00000520399 CRBNQ96SW2 442 aa14.81□□□□□ -0.04
ERGIC1-208ENST00000520399 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
ERGIC1-208ENST00000520399 PLIN1O60240 522 aa14.81□□□□□ -0.04
ERGIC1-208ENST00000520399 RBM10P98175 930 aaKnown RBP14.81□□□□□ -0.04
ERGIC1-208ENST00000520399 FAM161AQ3B820 660 aa14.81□□□□□ -0.04
ERGIC1-208ENST00000520399 NOL8Q76FK4 1167 aaKnown RBP14.81□□□□□ -0.04
ERGIC1-208ENST00000520399 EXOC6Q8TAG9 804 aa14.8□□□□□ -0.04
ERGIC1-208ENST00000520399 PHF14O94880 888 aa14.8□□□□□ -0.04
ERGIC1-208ENST00000520399 PES1O00541 588 aaKnown RBP14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 TPM1P09493 284 aa14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 WWC1Q8IX03 1113 aa14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 MIA2Q96PC5 1412 aa14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 BCL2L13Q9BXK5 485 aa14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.044e-6■■□□□ 14
ERGIC1-208ENST00000520399 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 CWC15Q9P013 229 aaKnown RBP14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 KIF16BQ96L93 1317 aa14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 CCDC7Q96M83 1385 aa14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 CNTLNQ9NXG0 1405 aa14.79□□□□□ -0.04
ERGIC1-208ENST00000520399 ANKRD45Q5TZF3 282 aa14.78□□□□□ -0.04
ERGIC1-208ENST00000520399 TCEAL9Q9UHQ7 104 aa14.78□□□□□ -0.04
ERGIC1-208ENST00000520399 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
ERGIC1-208ENST00000520399 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.78□□□□□ -0.04
ERGIC1-208ENST00000520399 PDCL3Q9H2J4 239 aa14.78□□□□□ -0.04
ERGIC1-208ENST00000520399 ARHGAP5Q13017 1502 aa14.77□□□□□ -0.04
ERGIC1-208ENST00000520399 PDE4AP27815 886 aa14.77□□□□□ -0.05
ERGIC1-208ENST00000520399 NGEFQ8N5V2 710 aa14.77□□□□□ -0.05
ERGIC1-208ENST00000520399 ELL2O00472 640 aaPredicted RBP14.77□□□□□ -0.05
ERGIC1-208ENST00000520399 STAC3Q96MF2 364 aa14.77□□□□□ -0.05
ERGIC1-208ENST00000520399 ZNF644Q9H582 1327 aaPredicted RBP14.76□□□□□ -0.05
ERGIC1-208ENST00000520399 APAF1O14727 1248 aa14.76□□□□□ -0.05
ERGIC1-208ENST00000520399 SKOR2Q2VWA4 1001 aaPredicted RBP14.76□□□□□ -0.05
ERGIC1-208ENST00000520399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.76□□□□□ -0.05
ERGIC1-208ENST00000520399 KIF3AQ9Y496 699 aa14.76□□□□□ -0.05
ERGIC1-208ENST00000520399 ANKRD50Q9ULJ7 1429 aa14.76□□□□□ -0.05
ERGIC1-208ENST00000520399 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
ERGIC1-208ENST00000520399 RILPL2Q969X0 211 aa14.76□□□□□ -0.05
ERGIC1-208ENST00000520399 CDR1P51861 262 aa14.75□□□□□ -0.05
ERGIC1-208ENST00000520399 COG6Q9Y2V7 657 aa14.75□□□□□ -0.05
ERGIC1-208ENST00000520399 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
ERGIC1-208ENST00000520399 KIF7Q2M1P5 1343 aa14.75□□□□□ -0.05
ERGIC1-208ENST00000520399 DDX19BQ9UMR2 479 aa14.75□□□□□ -0.05
ERGIC1-208ENST00000520399 CCAR2Q8N163 923 aaKnown RBP14.74□□□□□ -0.05
ERGIC1-208ENST00000520399 RUNDC1Q96C34 613 aa14.74□□□□□ -0.05
ERGIC1-208ENST00000520399 EFCAB5A4FU69 1503 aa14.74□□□□□ -0.05
ERGIC1-208ENST00000520399 ROCK1Q13464 1354 aa14.74□□□□□ -0.05
ERGIC1-208ENST00000520399 HMGB1P09429 215 aaKnown RBP14.73□□□□□ -0.05
ERGIC1-208ENST00000520399 SF3A1Q15459 793 aaKnown RBP14.73□□□□□ -0.05
ERGIC1-208ENST00000520399 EHBP1L1Q8N3D4 1523 aa14.73□□□□□ -0.05
ERGIC1-208ENST00000520399 RIPK4P57078 832 aa14.73□□□□□ -0.05
ERGIC1-208ENST00000520399 IRX3P78415 501 aaPredicted RBP14.73□□□□□ -0.05
ERGIC1-208ENST00000520399 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
ERGIC1-208ENST00000520399 TEFQ10587 303 aa14.73□□□□□ -0.05
ERGIC1-208ENST00000520399 CTDP1Q9Y5B0 961 aaPredicted RBP14.73□□□□□ -0.05
ERGIC1-208ENST00000520399 TOMM22Q9NS69 142 aa14.72□□□□□ -0.05
ERGIC1-208ENST00000520399 MRE11P49959 708 aa14.71□□□□□ -0.05
ERGIC1-208ENST00000520399 TTC5Q8N0Z6 440 aa14.71□□□□□ -0.05
ERGIC1-208ENST00000520399 CHMP4CQ96CF2 233 aa14.71□□□□□ -0.05
ERGIC1-208ENST00000520399 API5Q9BZZ5 524 aaKnown RBP14.71□□□□□ -0.05
ERGIC1-208ENST00000520399 EVA1CP58658 441 aa14.71□□□□□ -0.06
ERGIC1-208ENST00000520399 DZIP1LQ8IYY4 767 aaKnown RBP14.71□□□□□ -0.06
ERGIC1-208ENST00000520399 RRBP1Q9P2E9 1410 aaKnown RBP14.7□□□□□ -0.06
ERGIC1-208ENST00000520399 FOXD4L5Q5VV16 416 aaPredicted RBP14.7□□□□□ -0.06
ERGIC1-208ENST00000520399 FOXD4L4Q8WXT5 416 aaPredicted RBP14.7□□□□□ -0.06
ERGIC1-208ENST00000520399 SYNJ2O15056 1496 aa14.7□□□□□ -0.06
ERGIC1-208ENST00000520399 FRAT2O75474 233 aaPredicted RBP14.7□□□□□ -0.06
ERGIC1-208ENST00000520399 GTF2E1P29083 439 aaPredicted RBP14.7□□□□□ -0.06
ERGIC1-208ENST00000520399 R3HCC1Q9Y3T6 440 aaKnown RBP14.7□□□□□ -0.06
ERGIC1-208ENST00000520399 NEXNQ0ZGT2 675 aa14.69□□□□□ -0.06
ERGIC1-208ENST00000520399 H3BQV1 296 aa14.69□□□□□ -0.06
ERGIC1-208ENST00000520399 IFFO2Q5TF58 517 aa14.69□□□□□ -0.06
ERGIC1-208ENST00000520399 CCDC47Q96A33 483 aaKnown RBP14.69□□□□□ -0.06
ERGIC1-208ENST00000520399 EIF2S2P20042 333 aaKnown RBP14.69□□□□□ -0.06
ERGIC1-208ENST00000520399 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
ERGIC1-208ENST00000520399 HECW1Q76N89 1606 aa14.68□□□□□ -0.06
ERGIC1-208ENST00000520399 NFKBIBQ15653 356 aa14.68□□□□□ -0.06
ERGIC1-208ENST00000520399 PCMTD1Q96MG8 357 aaPredicted RBP14.68□□□□□ -0.06
ERGIC1-208ENST00000520399 CFTRP13569 1480 aa14.68□□□□□ -0.06
ERGIC1-208ENST00000520399 AK7Q96M32 723 aa14.68□□□□□ -0.06
ERGIC1-208ENST00000520399 DIAPH3Q9NSV4 1193 aa14.68□□□□□ -0.06
ERGIC1-208ENST00000520399 TOP2BQ02880 1626 aa14.68□□□□□ -0.06
ERGIC1-208ENST00000520399 IPO7O95373 1038 aaKnown RBP14.68□□□□□ -0.06
ERGIC1-208ENST00000520399 AKAP17AQ02040 695 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms