RNA–Protein interactions for RNA: ENST00000520381.5

ARFGEF1-207, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 5,882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-207ENST00000520381 CCDC88BA6NC98 1476 aa5.62□□□□□ -1.51
ARFGEF1-207ENST00000520381 RGS22Q8NE09 1264 aa5.62□□□□□ -1.51
ARFGEF1-207ENST00000520381 CERS3Q8IU89 383 aa5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 OFD1O75665 1012 aa5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 CREBRFQ8IUR6 639 aa5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 WRNQ14191 1432 aaPredicted RBP eCLIP5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 RIMBP3CA6NJZ7 1639 aa5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 RIMBP3BA6NNM3 1639 aa5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 RIMBP3Q9UFD9 1639 aa5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 PES1O00541 588 aaKnown RBP5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 CPSF2Q9P2I0 782 aaKnown RBP5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 LRCH2Q5VUJ6 765 aa5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 ACBD3Q9H3P7 528 aa5.61□□□□□ -1.51
ARFGEF1-207ENST00000520381 SMARCA4P51532 1647 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 DYDC1Q8WWB3 177 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 SLC26A8Q96RN1 970 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 EFCC1Q9HA90 598 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 GOLGA6L4A6NEF3 574 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 WDR43Q15061 677 aaKnown RBP eCLIP5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 TERF2IPQ9NYB0 399 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 ATAD2BQ9ULI0 1458 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 MYCNP04198 464 aaPredicted RBP5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 MCM5P33992 734 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 MNAT1P51948 309 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 NAP1L1P55209 391 aaKnown RBP5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 HSP90B2PQ58FF3 399 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 ATP6V1AP38606 617 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 GABPB1Q06547 395 aaPredicted RBP5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 PRIMPOLQ96LW4 560 aa5.6□□□□□ -1.51
ARFGEF1-207ENST00000520381 GOLGA6L19H0YKK7 550 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 CACNB1Q02641 598 aaPredicted RBP5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 ANKRD20A12PQ8NF67 263 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 CCDC34Q96HJ3 373 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 FEZ1Q99689 392 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 CCDC191Q8NCU4 936 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 ZNF428Q96B54 188 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 BACH2Q9BYV9 841 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 NUDCQ9Y266 331 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 CLIP1P30622 1438 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 GOLGA6L10A6NI86 522 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 MFAP1P55081 439 aaKnown RBP5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 CCDC97Q96F63 343 aaPredicted RBP5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 ARHGEF11O15085 1522 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 IFT140Q96RY7 1462 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 DNAAF4Q8WXU2 420 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 SMC4Q9NTJ3 1288 aa5.59□□□□□ -1.51
ARFGEF1-207ENST00000520381 VGFO15240 615 aaPredicted RBP5.59□□□□□ -1.52
ARFGEF1-207ENST00000520381 NUCKS1Q9H1E3 243 aaKnown RBP5.59□□□□□ -1.52
ARFGEF1-207ENST00000520381 RSPH14Q9UHP6 348 aa5.59□□□□□ -1.52
ARFGEF1-207ENST00000520381 TTLL5Q6EMB2 1281 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 FAM107BQ9H098 131 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 HIRIP3Q9BW71 556 aaPredicted RBP5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 TPM3P06753 285 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 KCNH8Q96L42 1107 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 XRCC6P12956 609 aaKnown RBP eCLIP5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 MCM4P33991 863 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 GTF2F1P35269 517 aaKnown RBP eCLIP5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 AP1ARQ63HQ0 302 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 CEP164Q9UPV0 1460 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 ZNF853P0CG23 659 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 CDR1P51861 262 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 CAVIN1Q6NZI2 390 aaKnown RBP5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 KRT222Q8N1A0 295 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 ZNF830Q96NB3 372 aaPredicted RBP5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 SIN3AQ96ST3 1273 aa5.58□□□□□ -1.52
ARFGEF1-207ENST00000520381 SATB1Q01826 763 aa5.57□□□□□ -1.52
ARFGEF1-207ENST00000520381 MAP2K1Q02750 393 aaPredicted RBP5.57□□□□□ -1.52
ARFGEF1-207ENST00000520381 NUCB2P80303 420 aa5.57□□□□□ -1.52
ARFGEF1-207ENST00000520381 SF3B2Q13435 895 aaKnown RBP5.57□□□□□ -1.52
ARFGEF1-207ENST00000520381 SPDYE4A6NLX3 237 aa5.57□□□□□ -1.52
ARFGEF1-207ENST00000520381 TPM1P09493 284 aa5.57□□□□□ -1.52
ARFGEF1-207ENST00000520381 CCDC112Q8NEF3 446 aa5.57□□□□□ -1.52
ARFGEF1-207ENST00000520381 NOC3LQ8WTT2 800 aaKnown RBP5.57□□□□□ -1.52
ARFGEF1-207ENST00000520381 CEP83Q9Y592 693 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 MAP2K2P36507 400 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 EIF4G2P78344 907 aaKnown RBP eCLIP5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 XPCQ01831 940 aaPredicted RBP5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 NCAPGQ9BPX3 1015 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 KCNG1Q9UIX4 513 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 RCAN3Q9UKA8 241 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 CADPSQ9ULU8 1353 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 KIAA1328Q86T90 577 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 STK31Q9BXU1 1019 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 BRMS1Q9HCU9 246 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 TNIKQ9UKE5 1360 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 RABEP1Q15276 862 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 SOGA1O94964 1423 aa5.56□□□□□ -1.52
ARFGEF1-207ENST00000520381 A0A1B0GUL7 405 aa5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 SRPK2P78362 688 aaKnown RBP5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 TTC31Q49AM3 519 aaPredicted RBP5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 FMNL3Q8IVF7 1028 aa5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 U2SURPO15042 1029 aaKnown RBP5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 PPP2R5AQ15172 486 aa5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 RPAINQ86UA6 219 aa5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 C10orf67Q8IYJ2 551 aa5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 TXLNBQ8N3L3 684 aa5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 RNF214Q8ND24 703 aa5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 SLC4A1APQ9BWU0 796 aaKnown RBP5.55□□□□□ -1.52
ARFGEF1-207ENST00000520381 CWC22Q9HCG8 908 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms