RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 FBXO31Q5XUX0 539 aaPredicted RBP22.59■■□□□ 1.21
SNHG6-201ENST00000520348 SETBP1Q9Y6X0 1596 aa22.59■■□□□ 1.21
SNHG6-201ENST00000520348 KDM5AP29375 1690 aaKnown RBP22.58■■□□□ 1.21
SNHG6-201ENST00000520348 MLECQ14165 292 aa22.58■■□□□ 1.21
SNHG6-201ENST00000520348 WASHC2AQ641Q2 1341 aa22.57■■□□□ 1.2
SNHG6-201ENST00000520348 FER1L4A9Z1Z3 1794 aa22.56■■□□□ 1.2
SNHG6-201ENST00000520348 CCDC7Q96M83 1385 aa22.56■■□□□ 1.2
SNHG6-201ENST00000520348 NBPF1Q3BBV0 1214 aa22.56■■□□□ 1.2
SNHG6-201ENST00000520348 MYO5BQ9ULV0 1848 aa22.56■■□□□ 1.2
SNHG6-201ENST00000520348 ARID4BQ4LE39 1312 aaPredicted RBP22.56■■□□□ 1.2
SNHG6-201ENST00000520348 ADGRF5Q8IZF2 1346 aa22.55■■□□□ 1.2
SNHG6-201ENST00000520348 A2ML1A8K2U0 1454 aa22.54■■□□□ 1.2
SNHG6-201ENST00000520348 SCAF11Q99590 1463 aaKnown RBP22.54■■□□□ 1.2
SNHG6-201ENST00000520348 C3P01024 1663 aa22.52■■□□□ 1.2
SNHG6-201ENST00000520348 ESF1Q9H501 851 aaKnown RBP22.52■■□□□ 1.2
SNHG6-201ENST00000520348 ADGRB1O14514 1584 aa22.51■■□□□ 1.19
SNHG6-201ENST00000520348 C11orf95C9JLR9 678 aaPredicted RBP22.51■■□□□ 1.19
SNHG6-201ENST00000520348 TNRQ92752 1358 aa22.5■■□□□ 1.19
SNHG6-201ENST00000520348 KIF7Q2M1P5 1343 aa22.49■■□□□ 1.19
SNHG6-201ENST00000520348 NLRP1Q9C000 1473 aa22.48■■□□□ 1.19
SNHG6-201ENST00000520348 CHGAP10645 457 aaKnown RBP22.48■■□□□ 1.19
SNHG6-201ENST00000520348 MYO3AQ8NEV4 1616 aa22.48■■□□□ 1.19
SNHG6-201ENST00000520348 ADAMTSL3P82987 1691 aa22.48■■□□□ 1.19
SNHG6-201ENST00000520348 DDX10Q13206 875 aaKnown RBP22.47■■□□□ 1.19
SNHG6-201ENST00000520348 ST20-MTHFSA0A0A6YYL1 179 aa22.46■■□□□ 1.19
SNHG6-201ENST00000520348 C14orf93Q9H972 538 aaKnown RBP22.46■■□□□ 1.19
SNHG6-201ENST00000520348 VGFO15240 615 aaPredicted RBP22.45■■□□□ 1.18
SNHG6-201ENST00000520348 MIER1Q8N108 512 aa22.45■■□□□ 1.18
SNHG6-201ENST00000520348 UBR1Q8IWV7 1749 aa22.45■■□□□ 1.18
SNHG6-201ENST00000520348 CFAP70Q5T0N1 1121 aa22.43■■□□□ 1.18
SNHG6-201ENST00000520348 TESK2Q96S53 571 aa22.43■■□□□ 1.18
SNHG6-201ENST00000520348 ASXL1Q8IXJ9 1541 aa22.42■■□□□ 1.18
SNHG6-201ENST00000520348 EIF3AQ14152 1382 aaKnown RBP22.41■■□□□ 1.18
SNHG6-201ENST00000520348 RIMS2Q9UQ26 1411 aa22.4■■□□□ 1.18
SNHG6-201ENST00000520348 SBNO2Q9Y2G9 1366 aa22.39■■□□□ 1.18
SNHG6-201ENST00000520348 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
SNHG6-201ENST00000520348 RIMS1Q86UR5 1692 aaKnown RBP22.37■■□□□ 1.17
SNHG6-201ENST00000520348 NRXN3Q9Y4C0 1643 aa22.35■■□□□ 1.17
SNHG6-201ENST00000520348 ALKQ9UM73 1620 aa22.35■■□□□ 1.17
SNHG6-201ENST00000520348 ARHGAP23Q9P227 1491 aa22.34■■□□□ 1.17
SNHG6-201ENST00000520348 SLIT1O75093 1534 aa22.33■■□□□ 1.17
SNHG6-201ENST00000520348 ARHGEF28Q8N1W1 1705 aaKnown RBP22.33■■□□□ 1.17
SNHG6-201ENST00000520348 DISP3Q9P2K9 1392 aa22.33■■□□□ 1.17
SNHG6-201ENST00000520348 TMEM2Q9UHN6 1383 aa22.33■■□□□ 1.17
SNHG6-201ENST00000520348 STAG3Q9UJ98 1225 aa22.32■■□□□ 1.16
SNHG6-201ENST00000520348 PTPRMP28827 1452 aa22.31■■□□□ 1.16
SNHG6-201ENST00000520348 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.31■■□□□ 1.16
SNHG6-201ENST00000520348 CEBPAP49715 358 aaPredicted RBP22.3■■□□□ 1.16
SNHG6-201ENST00000520348 ZNF142P52746 1687 aaPredicted RBP22.3■■□□□ 1.16
SNHG6-201ENST00000520348 SLC24A1O60721 1099 aa22.29■■□□□ 1.16
SNHG6-201ENST00000520348 TMF1P82094 1093 aa22.28■■□□□ 1.16
SNHG6-201ENST00000520348 DLC1Q96QB1 1528 aa22.27■■□□□ 1.16
SNHG6-201ENST00000520348 QRICH2Q9H0J4 1663 aa22.26■■□□□ 1.15
SNHG6-201ENST00000520348 CEP170BQ9Y4F5 1589 aaPredicted RBP22.26■■□□□ 1.15
SNHG6-201ENST00000520348 NUTM2DQ5VT03 806 aaPredicted RBP22.26■■□□□ 1.15
SNHG6-201ENST00000520348 CENPJQ9HC77 1338 aaPredicted RBP22.24■■□□□ 1.15
SNHG6-201ENST00000520348 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
SNHG6-201ENST00000520348 ANP32CO43423 234 aa22.23■■□□□ 1.15
SNHG6-201ENST00000520348 HDGFP51858 240 aaKnown RBP22.23■■□□□ 1.15
SNHG6-201ENST00000520348 MYOM1P52179 1685 aa22.23■■□□□ 1.15
SNHG6-201ENST00000520348 PLEKHG1Q9ULL1 1385 aa22.23■■□□□ 1.15
SNHG6-201ENST00000520348 CCER2I3L3R5 266 aa22.22■■□□□ 1.15
SNHG6-201ENST00000520348 KNDC1Q76NI1 1749 aa22.22■■□□□ 1.15
SNHG6-201ENST00000520348 CDCA8Q53HL2 280 aa22.21■■□□□ 1.15
SNHG6-201ENST00000520348 TMEM132EQ6IEE7 984 aa22.21■■□□□ 1.15
SNHG6-201ENST00000520348 MED14O60244 1454 aa22.21■■□□□ 1.15
SNHG6-201ENST00000520348 LRPPRCP42704 1394 aaKnown RBP22.2■■□□□ 1.14
SNHG6-201ENST00000520348 ADAMTS13Q76LX8 1427 aa22.2■■□□□ 1.14
SNHG6-201ENST00000520348 TECPR2O15040 1411 aa22.19■■□□□ 1.14
SNHG6-201ENST00000520348 ABCC11Q96J66 1382 aa22.17■■□□□ 1.14
SNHG6-201ENST00000520348 TRAK1Q9UPV9 953 aa22.17■■□□□ 1.14
SNHG6-201ENST00000520348 DIP2AQ14689 1571 aa22.16■■□□□ 1.14
SNHG6-201ENST00000520348 TULP4Q9NRJ4 1543 aa22.16■■□□□ 1.14
SNHG6-201ENST00000520348 PUS7Q96PZ0 661 aaKnown RBP22.16■■□□□ 1.14
SNHG6-201ENST00000520348 SETD1BQ9UPS6 1966 aaKnown RBP22.16■■□□□ 1.14
SNHG6-201ENST00000520348 CPS1P31327 1500 aa22.16■■□□□ 1.14
SNHG6-201ENST00000520348 THEMISQ8N1K5 641 aaPredicted RBP22.14■■□□□ 1.13
SNHG6-201ENST00000520348 PRKRIP1Q9H875 184 aaPredicted RBP22.14■■□□□ 1.13
SNHG6-201ENST00000520348 LTKP29376 864 aa22.13■■□□□ 1.13
SNHG6-201ENST00000520348 METP08581 1390 aa22.12■■□□□ 1.13
SNHG6-201ENST00000520348 KTN1Q86UP2 1357 aaKnown RBP22.12■■□□□ 1.13
SNHG6-201ENST00000520348 PER1O15534 1290 aaPredicted RBP22.11■■□□□ 1.13
SNHG6-201ENST00000520348 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
SNHG6-201ENST00000520348 FAM135BQ49AJ0 1406 aa22.11■■□□□ 1.13
SNHG6-201ENST00000520348 SIRT1Q96EB6 747 aa22.1■■□□□ 1.13
SNHG6-201ENST00000520348 EID1Q9Y6B2 187 aa22.08■■□□□ 1.13
SNHG6-201ENST00000520348 TXNDC2Q86VQ3 553 aa22.07■■□□□ 1.12
SNHG6-201ENST00000520348 EVC2Q86UK5 1308 aa22.04■■□□□ 1.12
SNHG6-201ENST00000520348 PARD3Q8TEW0 1356 aa22.03■■□□□ 1.12
SNHG6-201ENST00000520348 NPC1L1Q9UHC9 1359 aa22.03■■□□□ 1.12
SNHG6-201ENST00000520348 PRAM1Q96QH2 718 aa22.03■■□□□ 1.12
SNHG6-201ENST00000520348 PANK3Q9H999 370 aa22.03■■□□□ 1.12
SNHG6-201ENST00000520348 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
SNHG6-201ENST00000520348 XRN1Q8IZH2 1706 aaKnown RBP22.03■■□□□ 1.12
SNHG6-201ENST00000520348 STK26Q9P289 416 aa22.02■■□□□ 1.12
SNHG6-201ENST00000520348 ADGRB2O60241 1585 aa22.02■■□□□ 1.12
SNHG6-201ENST00000520348 PIK3R4Q99570 1358 aa22.01■■□□□ 1.11
SNHG6-201ENST00000520348 NINLQ9Y2I6 1382 aa22.01■■□□□ 1.11
SNHG6-201ENST00000520348 PTPRUQ92729 1446 aa22.01■■□□□ 1.11
SNHG6-201ENST00000520348 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms