RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 IQGAP2Q13576 1575 aa12.39□□□□□ -0.43
CTHRC1-203ENST00000520337 NUP160Q12769 1436 aa12.38□□□□□ -0.43
CTHRC1-203ENST00000520337 PPP1R3GB7ZBB8 358 aa12.38□□□□□ -0.43
CTHRC1-203ENST00000520337 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
CTHRC1-203ENST00000520337 SAMD9Q5K651 1589 aa12.37□□□□□ -0.43
CTHRC1-203ENST00000520337 EFCAB5A4FU69 1503 aa12.36□□□□□ -0.43
CTHRC1-203ENST00000520337 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
CTHRC1-203ENST00000520337 VPS8Q8N3P4 1428 aa12.35□□□□□ -0.43
CTHRC1-203ENST00000520337 UGGT2Q9NYU1 1516 aa12.34□□□□□ -0.43
CTHRC1-203ENST00000520337 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
CTHRC1-203ENST00000520337 DDX12PQ92771 950 aa12.33□□□□□ -0.44
CTHRC1-203ENST00000520337 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
CTHRC1-203ENST00000520337 NBPF3Q9H094 633 aa12.31□□□□□ -0.44
CTHRC1-203ENST00000520337 P3H3Q8IVL6 736 aa12.3□□□□□ -0.44
CTHRC1-203ENST00000520337 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
CTHRC1-203ENST00000520337 NBR1Q14596 966 aa12.29□□□□□ -0.44
CTHRC1-203ENST00000520337 DISP1Q96F81 1524 aa12.28□□□□□ -0.44
CTHRC1-203ENST00000520337 COL9A1P20849 921 aa12.28□□□□□ -0.44
CTHRC1-203ENST00000520337 EN1Q05925 392 aaPredicted RBP12.28□□□□□ -0.44
CTHRC1-203ENST00000520337 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
CTHRC1-203ENST00000520337 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
CTHRC1-203ENST00000520337 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
CTHRC1-203ENST00000520337 KIAA0556O60303 1618 aa12.26□□□□□ -0.45
CTHRC1-203ENST00000520337 PLCB2Q00722 1185 aa12.26□□□□□ -0.45
CTHRC1-203ENST00000520337 KCTD12Q96CX2 325 aaKnown RBP12.26□□□□□ -0.45
CTHRC1-203ENST00000520337 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
CTHRC1-203ENST00000520337 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
CTHRC1-203ENST00000520337 CLASP1Q7Z460 1538 aa12.25□□□□□ -0.45
CTHRC1-203ENST00000520337 GOLGA8CPA6NN73 597 aa12.24□□□□□ -0.45
CTHRC1-203ENST00000520337 MAP3K7O43318 606 aa12.24□□□□□ -0.45
CTHRC1-203ENST00000520337 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
CTHRC1-203ENST00000520337 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
CTHRC1-203ENST00000520337 PCF11O94913 1555 aaKnown RBP12.23□□□□□ -0.45
CTHRC1-203ENST00000520337 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
CTHRC1-203ENST00000520337 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
CTHRC1-203ENST00000520337 LRRIQ1Q96JM4 1722 aa12.22□□□□□ -0.45
CTHRC1-203ENST00000520337 CASKIN1Q8WXD9 1431 aa12.21□□□□□ -0.45
CTHRC1-203ENST00000520337 GRXCR2A6NFK2 248 aa12.21□□□□□ -0.45
CTHRC1-203ENST00000520337 LAPTM4BQ86VI4 370 aa12.21□□□□□ -0.45
CTHRC1-203ENST00000520337 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
CTHRC1-203ENST00000520337 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
CTHRC1-203ENST00000520337 CERKQ8TCT0 537 aa12.2□□□□□ -0.46
CTHRC1-203ENST00000520337 FYCO1Q9BQS8 1478 aa12.2□□□□□ -0.46
CTHRC1-203ENST00000520337 KCNV2Q8TDN2 545 aa12.19□□□□□ -0.46
CTHRC1-203ENST00000520337 WNT2BQ93097 391 aa12.19□□□□□ -0.46
CTHRC1-203ENST00000520337 MAP3K1Q13233 1512 aa12.19□□□□□ -0.46
CTHRC1-203ENST00000520337 PRG4Q92954 1404 aaPredicted RBP12.19□□□□□ -0.46
CTHRC1-203ENST00000520337 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
CTHRC1-203ENST00000520337 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
CTHRC1-203ENST00000520337 KIAA1468Q9P260 1216 aa12.18□□□□□ -0.46
CTHRC1-203ENST00000520337 CARMIL2Q6F5E8 1435 aa12.18□□□□□ -0.46
CTHRC1-203ENST00000520337 TIAM1Q13009 1591 aa12.18□□□□□ -0.46
CTHRC1-203ENST00000520337 CFAP43Q8NDM7 1665 aa12.17□□□□□ -0.46
CTHRC1-203ENST00000520337 OSBPP22059 807 aa12.16□□□□□ -0.46
CTHRC1-203ENST00000520337 KANK4Q5T7N3 995 aaPredicted RBP12.16□□□□□ -0.46
CTHRC1-203ENST00000520337 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
CTHRC1-203ENST00000520337 TRIM26Q12899 539 aaPredicted RBP12.14□□□□□ -0.47
CTHRC1-203ENST00000520337 ANKK1Q8NFD2 765 aa12.14□□□□□ -0.47
CTHRC1-203ENST00000520337 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
CTHRC1-203ENST00000520337 RAPGEF6Q8TEU7 1601 aa12.13□□□□□ -0.47
CTHRC1-203ENST00000520337 PACS2Q86VP3 889 aa12.13□□□□□ -0.47
CTHRC1-203ENST00000520337 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
CTHRC1-203ENST00000520337 PTPN5P54829 565 aa12.12□□□□□ -0.47
CTHRC1-203ENST00000520337 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-203ENST00000520337 ABCA8O94911 1581 aa12.11□□□□□ -0.47
CTHRC1-203ENST00000520337 LRRC9Q6ZRR7 1453 aa12.11□□□□□ -0.47
CTHRC1-203ENST00000520337 FAM98CQ17RN3 349 aaKnown RBP12.11□□□□□ -0.47
CTHRC1-203ENST00000520337 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
CTHRC1-203ENST00000520337 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
CTHRC1-203ENST00000520337 NUP153P49790 1475 aaKnown RBP12.1□□□□□ -0.47
CTHRC1-203ENST00000520337 PLB1Q6P1J6 1458 aa12.1□□□□□ -0.47
CTHRC1-203ENST00000520337 PRSS12P56730 875 aa12.1□□□□□ -0.47
CTHRC1-203ENST00000520337 CDCA7LQ96GN5 454 aa12.1□□□□□ -0.47
CTHRC1-203ENST00000520337 ZFRQ96KR1 1074 aaKnown RBP12.1□□□□□ -0.47
CTHRC1-203ENST00000520337 EPRSP07814 1512 aaKnown RBP12.1□□□□□ -0.47
CTHRC1-203ENST00000520337 PTPRGP23470 1445 aa12.1□□□□□ -0.47
CTHRC1-203ENST00000520337 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
CTHRC1-203ENST00000520337 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
CTHRC1-203ENST00000520337 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
CTHRC1-203ENST00000520337 SEPT9Q9UHD8 586 aaPredicted RBP12.08□□□□□ -0.48
CTHRC1-203ENST00000520337 SOWAHBA6NEL2 793 aa12.07□□□□□ -0.48
CTHRC1-203ENST00000520337 CDK13Q14004 1512 aaKnown RBP12.06□□□□□ -0.48
CTHRC1-203ENST00000520337 CDHR5Q9HBB8 845 aa12.06□□□□□ -0.48
CTHRC1-203ENST00000520337 MAGI3Q5TCQ9 1506 aa12.06□□□□□ -0.48
CTHRC1-203ENST00000520337 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
CTHRC1-203ENST00000520337 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
CTHRC1-203ENST00000520337 MLLT3P42568 568 aaPredicted RBP12.04□□□□□ -0.48
CTHRC1-203ENST00000520337 NYAP1Q6ZVC0 841 aa12.04□□□□□ -0.48
CTHRC1-203ENST00000520337 UACAQ9BZF9 1416 aa12.03□□□□□ -0.48
CTHRC1-203ENST00000520337 ARID3CA6NKF2 412 aa12.02□□□□□ -0.49
CTHRC1-203ENST00000520337 RGS20O76081 388 aa12.02□□□□□ -0.49
CTHRC1-203ENST00000520337 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.49
CTHRC1-203ENST00000520337 ATP10BO94823 1461 aa12.02□□□□□ -0.49
CTHRC1-203ENST00000520337 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
CTHRC1-203ENST00000520337 BCAMP50895 628 aa12.01□□□□□ -0.49
CTHRC1-203ENST00000520337 LRCH3Q96II8 777 aa12.01□□□□□ -0.49
CTHRC1-203ENST00000520337 NPDC1Q9NQX5 325 aaPredicted RBP12.01□□□□□ -0.49
CTHRC1-203ENST00000520337 ABCC2Q92887 1545 aa12.01□□□□□ -0.49
CTHRC1-203ENST00000520337 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
CTHRC1-203ENST00000520337 CDKN2AIPQ9NXV6 580 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms