RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 NOS1P29475 1434 aa8.8□□□□□ -1
CTNNA1-219ENST00000520158 TMEM2Q9UHN6 1383 aa8.79□□□□□ -1
CTNNA1-219ENST00000520158 SOCS7O14512 581 aa8.79□□□□□ -1
CTNNA1-219ENST00000520158 ABCB7O75027 752 aa8.79□□□□□ -1
CTNNA1-219ENST00000520158 IDI1Q13907 227 aa8.79□□□□□ -1
CTNNA1-219ENST00000520158 ERICH6Q7L0X2 663 aa8.79□□□□□ -1
CTNNA1-219ENST00000520158 TXNDC2Q86VQ3 553 aa8.79□□□□□ -1
CTNNA1-219ENST00000520158 RBM42Q9BTD8 480 aaKnown RBP8.79□□□□□ -1
CTNNA1-219ENST00000520158 SYNMO15061 1565 aa8.78□□□□□ -1
CTNNA1-219ENST00000520158 RPRD2Q5VT52 1461 aaKnown RBP8.78□□□□□ -1
CTNNA1-219ENST00000520158 SLC52A1Q9NWF4 448 aa8.78□□□□□ -1
CTNNA1-219ENST00000520158 CHIC2Q9UKJ5 165 aa8.78□□□□□ -1
CTNNA1-219ENST00000520158 EID1Q9Y6B2 187 aa8.78□□□□□ -1
CTNNA1-219ENST00000520158 PIK3C2BO00750 1634 aa8.77□□□□□ -1.01
CTNNA1-219ENST00000520158 HSPA1LP34931 641 aa8.77□□□□□ -1.01
CTNNA1-219ENST00000520158 TET3O43151 1660 aa8.77□□□□□ -1.01
CTNNA1-219ENST00000520158 EFCAB6Q5THR3 1501 aa8.76□□□□□ -1.01
CTNNA1-219ENST00000520158 NPM3O75607 178 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-219ENST00000520158 ANKRD50Q9ULJ7 1429 aa8.76□□□□□ -1.01
CTNNA1-219ENST00000520158 ROCK1Q13464 1354 aa8.75□□□□□ -1.01
CTNNA1-219ENST00000520158 KCNA6P17658 529 aa8.74□□□□□ -1.01
CTNNA1-219ENST00000520158 PIP4K2BP78356 416 aa8.74□□□□□ -1.01
CTNNA1-219ENST00000520158 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-219ENST00000520158 XIRP1Q702N8 1843 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-219ENST00000520158 STAG3Q9UJ98 1225 aa8.73□□□□□ -1.01
CTNNA1-219ENST00000520158 FAM135BQ49AJ0 1406 aa8.72□□□□□ -1.01
CTNNA1-219ENST00000520158 ADGRB3O60242 1522 aa8.72□□□□□ -1.01
CTNNA1-219ENST00000520158 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-219ENST00000520158 FAM50AQ14320 339 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-219ENST00000520158 UNC13BO14795 1591 aa8.72□□□□□ -1.01
CTNNA1-219ENST00000520158 ZFYVE9O95405 1425 aa8.71□□□□□ -1.01
CTNNA1-219ENST00000520158 MED1Q15648 1581 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-219ENST00000520158 GCC2Q8IWJ2 1684 aa8.71□□□□□ -1.02
CTNNA1-219ENST00000520158 NWD1Q149M9 1564 aa8.7□□□□□ -1.02
CTNNA1-219ENST00000520158 TMEM131LA2VDJ0 1609 aa8.7□□□□□ -1.02
CTNNA1-219ENST00000520158 SLC4A1APQ9BWU0 796 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-219ENST00000520158 TBX22Q9Y458 520 aa8.7□□□□□ -1.02
CTNNA1-219ENST00000520158 PLEKHG1Q9ULL1 1385 aa8.7□□□□□ -1.02
CTNNA1-219ENST00000520158 NCOA3Q9Y6Q9 1424 aa8.7□□□□□ -1.02
CTNNA1-219ENST00000520158 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTNNA1-219ENST00000520158 SLC26A8Q96RN1 970 aa8.69□□□□□ -1.02
CTNNA1-219ENST00000520158 TMEM94Q12767 1356 aa8.69□□□□□ -1.02
CTNNA1-219ENST00000520158 NKTRP30414 1462 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-219ENST00000520158 IQGAP3Q86VI3 1631 aa8.69□□□□□ -1.02
CTNNA1-219ENST00000520158 CHD2O14647 1828 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-219ENST00000520158 E9PCH4 1651 aa8.68□□□□□ -1.02
CTNNA1-219ENST00000520158 MYO5BQ9ULV0 1848 aa8.68□□□□□ -1.02
CTNNA1-219ENST00000520158 PROSER2Q86WR7 435 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-219ENST00000520158 PIK3R4Q99570 1358 aa8.67□□□□□ -1.02
CTNNA1-219ENST00000520158 RIMS2Q9UQ26 1411 aa8.67□□□□□ -1.02
CTNNA1-219ENST00000520158 ADAMTS13Q76LX8 1427 aa8.65□□□□□ -1.02
CTNNA1-219ENST00000520158 NUP155O75694 1391 aa8.65□□□□□ -1.02
CTNNA1-219ENST00000520158 DIP2AQ14689 1571 aa8.65□□□□□ -1.03
CTNNA1-219ENST00000520158 SLAIN2Q9P270 581 aa8.64□□□□□ -1.03
CTNNA1-219ENST00000520158 RGS17Q9UGC6 210 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-219ENST00000520158 RRBP1Q9P2E9 1410 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-219ENST00000520158 MSH6P52701 1360 aa8.63□□□□□ -1.03
CTNNA1-219ENST00000520158 ROBO1Q9Y6N7 1651 aa8.62□□□□□ -1.03
CTNNA1-219ENST00000520158 PPP1R15AO75807 674 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-219ENST00000520158 C19orf44Q9H6X5 657 aa8.62□□□□□ -1.03
CTNNA1-219ENST00000520158 RBM33Q96EV2 1170 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-219ENST00000520158 BCANQ96GW7 911 aa8.61□□□□□ -1.03
CTNNA1-219ENST00000520158 SETBP1Q9Y6X0 1596 aa8.61□□□□□ -1.03
CTNNA1-219ENST00000520158 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-219ENST00000520158 CADPS2Q86UW7 1296 aa8.6□□□□□ -1.03
CTNNA1-219ENST00000520158 NAIPQ13075 1403 aa8.6□□□□□ -1.03
CTNNA1-219ENST00000520158 SPHKAPQ2M3C7 1700 aa8.6□□□□□ -1.03
CTNNA1-219ENST00000520158 TRPM2O94759 1503 aa8.59□□□□□ -1.03
CTNNA1-219ENST00000520158 NRXN3Q9Y4C0 1643 aa8.59□□□□□ -1.03
CTNNA1-219ENST00000520158 AMOTL2Q9Y2J4 779 aa8.59□□□□□ -1.03
CTNNA1-219ENST00000520158 PTPRUQ92729 1446 aa8.59□□□□□ -1.03
CTNNA1-219ENST00000520158 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-219ENST00000520158 DCCP43146 1447 aa8.58□□□□□ -1.04
CTNNA1-219ENST00000520158 ITGAEP38570 1179 aa8.58□□□□□ -1.04
CTNNA1-219ENST00000520158 JCADQ9P266 1359 aa8.58□□□□□ -1.04
CTNNA1-219ENST00000520158 PHLPP1O60346 1717 aa8.57□□□□□ -1.04
CTNNA1-219ENST00000520158 HFM1A2PYH4 1435 aa8.57□□□□□ -1.04
CTNNA1-219ENST00000520158 SLC4A2P04920 1241 aa8.57□□□□□ -1.04
CTNNA1-219ENST00000520158 NUTM2DQ5VT03 806 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-219ENST00000520158 AHDC1Q5TGY3 1603 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-219ENST00000520158 XRN1Q8IZH2 1706 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-219ENST00000520158 SPATA31A6Q5VVP1 1343 aa8.56□□□□□ -1.04
CTNNA1-219ENST00000520158 RPGRIP1LQ68CZ1 1315 aa8.56□□□□□ -1.04
CTNNA1-219ENST00000520158 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
CTNNA1-219ENST00000520158 COL16A1Q07092 1604 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-219ENST00000520158 ATF3P18847 181 aa8.56□□□□□ -1.04
CTNNA1-219ENST00000520158 POTEAQ6S8J7 498 aa8.56□□□□□ -1.04
CTNNA1-219ENST00000520158 PPARGC1BQ86YN6 1023 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-219ENST00000520158 METP08581 1390 aa8.56□□□□□ -1.04
CTNNA1-219ENST00000520158 PRAG1Q86YV5 1406 aa8.55□□□□□ -1.04
CTNNA1-219ENST00000520158 CLTCL1P53675 1640 aa8.55□□□□□ -1.04
CTNNA1-219ENST00000520158 KIF1BO60333 1816 aa8.55□□□□□ -1.04
CTNNA1-219ENST00000520158 VGFO15240 615 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-219ENST00000520158 ZNF326Q5BKZ1 582 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-219ENST00000520158 BRINP3Q76B58 766 aa8.54□□□□□ -1.04
CTNNA1-219ENST00000520158 PIP4P2Q8N4L2 257 aa8.54□□□□□ -1.04
CTNNA1-219ENST00000520158 SHPRHQ149N8 1683 aa8.53□□□□□ -1.04
CTNNA1-219ENST00000520158 C14orf37Q86TY3 774 aa8.53□□□□□ -1.04
CTNNA1-219ENST00000520158 MST1RQ04912 1400 aa8.53□□□□□ -1.04
CTNNA1-219ENST00000520158 SETD5Q9C0A6 1442 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms