RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 LAPTM4BQ86VI4 370 aa11.55□□□□□ -0.56
NPM1-206ENST00000519955 TMEM134Q9H6X4 195 aa11.55□□□□□ -0.56
NPM1-206ENST00000519955 FAM217BQ9NTX9 383 aaPredicted RBP11.55□□□□□ -0.56
NPM1-206ENST00000519955 BHMG1C9JSJ3 638 aaPredicted RBP11.54□□□□□ -0.56
NPM1-206ENST00000519955 SSTR3P32745 418 aaPredicted RBP11.54□□□□□ -0.56
NPM1-206ENST00000519955 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
NPM1-206ENST00000519955 FAM117AQ9C073 453 aa11.54□□□□□ -0.56
NPM1-206ENST00000519955 SEPT9Q9UHD8 586 aaPredicted RBP11.54□□□□□ -0.56
NPM1-206ENST00000519955 MS4A1P11836 297 aa11.53□□□□□ -0.56
NPM1-206ENST00000519955 IL27Q8NEV9 243 aa11.52□□□□□ -0.57
NPM1-206ENST00000519955 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
NPM1-206ENST00000519955 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
NPM1-206ENST00000519955 SULF1Q8IWU6 871 aa11.51□□□□□ -0.57
NPM1-206ENST00000519955 MRPL50Q8N5N7 158 aaKnown RBP11.5□□□□□ -0.57
NPM1-206ENST00000519955 HRO43593 1189 aa11.49□□□□□ -0.57
NPM1-206ENST00000519955 SLC4A3P48751 1232 aa11.48□□□□□ -0.57
NPM1-206ENST00000519955 STAC3Q96MF2 364 aa11.48□□□□□ -0.57
NPM1-206ENST00000519955 PLEKHG3A1L390 1219 aa11.47□□□□□ -0.57
NPM1-206ENST00000519955 SWT1Q5T5J6 900 aaKnown RBP11.47□□□□□ -0.57
NPM1-206ENST00000519955 BEGAINQ9BUH8 593 aa11.47□□□□□ -0.57
NPM1-206ENST00000519955 RSPH4AQ5TD94 716 aa11.46□□□□□ -0.57
NPM1-206ENST00000519955 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
NPM1-206ENST00000519955 CD46P15529 392 aa11.45□□□□□ -0.58
NPM1-206ENST00000519955 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
NPM1-206ENST00000519955 SLF2Q8IX21 1173 aa11.44□□□□□ -0.58
NPM1-206ENST00000519955 SAMD7Q7Z3H4 446 aa11.43□□□□□ -0.58
NPM1-206ENST00000519955 GOLGA8CPA6NN73 597 aa11.42□□□□□ -0.58
NPM1-206ENST00000519955 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
NPM1-206ENST00000519955 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
NPM1-206ENST00000519955 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
NPM1-206ENST00000519955 DIXDC1Q155Q3 683 aa11.41□□□□□ -0.58
NPM1-206ENST00000519955 LRCH3Q96II8 777 aa11.4□□□□□ -0.58
NPM1-206ENST00000519955 ANKK1Q8NFD2 765 aa11.39□□□□□ -0.59
NPM1-206ENST00000519955 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
NPM1-206ENST00000519955 SH3D19Q5HYK7 790 aa11.38□□□□□ -0.59
NPM1-206ENST00000519955 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.38□□□□□ -0.59
NPM1-206ENST00000519955 SLC10A3P09131 477 aa11.37□□□□□ -0.59
NPM1-206ENST00000519955 NUTM1Q86Y26 1132 aa11.37□□□□□ -0.59
NPM1-206ENST00000519955 RNF40O75150 1001 aa11.36□□□□□ -0.59
NPM1-206ENST00000519955 GCGRP47871 477 aa11.36□□□□□ -0.59
NPM1-206ENST00000519955 TBC1D2Q9BYX2 928 aa11.36□□□□□ -0.59
NPM1-206ENST00000519955 SOWAHBA6NEL2 793 aa11.34□□□□□ -0.59
NPM1-206ENST00000519955 SKIV2LQ15477 1246 aaKnown RBP11.34□□□□□ -0.59
NPM1-206ENST00000519955 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
NPM1-206ENST00000519955 WNT2BQ93097 391 aa11.34□□□□□ -0.59
NPM1-206ENST00000519955 PCMTD1Q96MG8 357 aaPredicted RBP11.34□□□□□ -0.59
NPM1-206ENST00000519955 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
NPM1-206ENST00000519955 MYSM1Q5VVJ2 828 aa11.33□□□□□ -0.6
NPM1-206ENST00000519955 KDM4AO75164 1064 aa11.32□□□□□ -0.6
NPM1-206ENST00000519955 USP46P62068 366 aa11.32□□□□□ -0.6
NPM1-206ENST00000519955 CFHP08603 1231 aa11.31□□□□□ -0.6
NPM1-206ENST00000519955 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
NPM1-206ENST00000519955 CLK2P49760 499 aaKnown RBP11.29□□□□□ -0.6
NPM1-206ENST00000519955 BCAMP50895 628 aa11.29□□□□□ -0.6
NPM1-206ENST00000519955 PPP4CP60510 307 aa11.29□□□□□ -0.6
NPM1-206ENST00000519955 PRR14Q9BWN1 585 aa11.29□□□□□ -0.6
NPM1-206ENST00000519955 TSR3Q9UJK0 312 aaKnown RBP11.29□□□□□ -0.6
NPM1-206ENST00000519955 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
NPM1-206ENST00000519955 GJA5P36382 358 aa11.28□□□□□ -0.6
NPM1-206ENST00000519955 POLR3EQ9NVU0 708 aa11.28□□□□□ -0.6
NPM1-206ENST00000519955 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.61
NPM1-206ENST00000519955 RIC3Q7Z5B4 369 aa11.27□□□□□ -0.61
NPM1-206ENST00000519955 PLA2G2EQ9NZK7 142 aa11.27□□□□□ -0.61
NPM1-206ENST00000519955 SPTLC1O15269 473 aa11.26□□□□□ -0.61
NPM1-206ENST00000519955 HOXA2O43364 376 aa11.26□□□□□ -0.61
NPM1-206ENST00000519955 TUSC1Q2TAM9 212 aa11.26□□□□□ -0.61
NPM1-206ENST00000519955 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
NPM1-206ENST00000519955 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
NPM1-206ENST00000519955 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
NPM1-206ENST00000519955 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
NPM1-206ENST00000519955 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
NPM1-206ENST00000519955 ACTN4O43707 911 aaKnown RBP11.24□□□□□ -0.61
NPM1-206ENST00000519955 FUT2Q10981 343 aa11.24□□□□□ -0.61
NPM1-206ENST00000519955 ATP6V1AP38606 617 aa11.23□□□□□ -0.61
NPM1-206ENST00000519955 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
NPM1-206ENST00000519955 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
NPM1-206ENST00000519955 LIMD1Q9UGP4 676 aa11.23□□□□□ -0.61
NPM1-206ENST00000519955 NDUFV2P19404 249 aa11.22□□□□□ -0.61
NPM1-206ENST00000519955 FDX1P10109 184 aa11.2□□□□□ -0.62
NPM1-206ENST00000519955 APLP1P51693 650 aa11.2□□□□□ -0.62
NPM1-206ENST00000519955 NYAP1Q6ZVC0 841 aa11.2□□□□□ -0.62
NPM1-206ENST00000519955 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
NPM1-206ENST00000519955 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
NPM1-206ENST00000519955 HCSTQ9UBK5 93 aa11.18□□□□□ -0.62
NPM1-206ENST00000519955 MORN1Q5T089 497 aa11.17□□□□□ -0.62
NPM1-206ENST00000519955 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
NPM1-206ENST00000519955 PPP2R2DQ66LE6 453 aa11.16□□□□□ -0.62
NPM1-206ENST00000519955 ERICH6Q7L0X2 663 aa11.16□□□□□ -0.62
NPM1-206ENST00000519955 HLA-CQ95604 372 aa11.16□□□□□ -0.62
NPM1-206ENST00000519955 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
NPM1-206ENST00000519955 PCDHB15Q9Y5E8 787 aa11.16□□□□□ -0.62
NPM1-206ENST00000519955 LILRB3O75022 631 aa11.15□□□□□ -0.62
NPM1-206ENST00000519955 GUCA2AQ02747 115 aa11.15□□□□□ -0.62
NPM1-206ENST00000519955 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
NPM1-206ENST00000519955 PCDHGC3Q9UN70 934 aa11.15□□□□□ -0.62
NPM1-206ENST00000519955 PUS10Q3MIT2 529 aaKnown RBP11.14□□□□□ -0.63
NPM1-206ENST00000519955 NUTM2BA6NNL0 878 aaPredicted RBP11.13□□□□□ -0.63
NPM1-206ENST00000519955 NUTM2EB1AL46 878 aaPredicted RBP11.13□□□□□ -0.63
NPM1-206ENST00000519955 PTPN5P54829 565 aa11.13□□□□□ -0.63
NPM1-206ENST00000519955 QPCTQ16769 361 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms