RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 GTF3C3Q9Y5Q9 886 aa25.46■■□□□ 1.67
FAM49B-214ENST00000519540 NRXN1Q9ULB1 1477 aa25.46■■□□□ 1.67
FAM49B-214ENST00000519540 SCAF11Q99590 1463 aaKnown RBP25.44■■□□□ 1.66
FAM49B-214ENST00000519540 PPP6R1Q9UPN7 881 aa25.43■■□□□ 1.66
FAM49B-214ENST00000519540 RPGRIP1LQ68CZ1 1315 aa25.43■■□□□ 1.66
FAM49B-214ENST00000519540 PPLO60437 1756 aa25.43■■□□□ 1.66
FAM49B-214ENST00000519540 CFAP70Q5T0N1 1121 aa25.42■■□□□ 1.66
FAM49B-214ENST00000519540 DISP3Q9P2K9 1392 aa25.41■■□□□ 1.66
FAM49B-214ENST00000519540 ARHGEF40Q8TER5 1519 aa25.4■■□□□ 1.66
FAM49B-214ENST00000519540 TMF1P82094 1093 aa25.4■■□□□ 1.66
FAM49B-214ENST00000519540 PREX1Q8TCU6 1659 aa25.4■■□□□ 1.66
FAM49B-214ENST00000519540 SLC52A1Q9NWF4 448 aa25.39■■□□□ 1.65
FAM49B-214ENST00000519540 IDI1Q13907 227 aa25.38■■□□□ 1.65
FAM49B-214ENST00000519540 CCDC184Q52MB2 194 aa25.38■■□□□ 1.65
FAM49B-214ENST00000519540 PIK3C2GO75747 1445 aa25.35■■□□□ 1.65
FAM49B-214ENST00000519540 EIF3AQ14152 1382 aaKnown RBP25.34■■□□□ 1.65
FAM49B-214ENST00000519540 FBXO31Q5XUX0 539 aaPredicted RBP25.32■■□□□ 1.64
FAM49B-214ENST00000519540 C14orf93Q9H972 538 aaKnown RBP25.32■■□□□ 1.64
FAM49B-214ENST00000519540 SETBP1Q9Y6X0 1596 aa25.32■■□□□ 1.64
FAM49B-214ENST00000519540 CLTCQ00610 1675 aaKnown RBP25.32■■□□□ 1.64
FAM49B-214ENST00000519540 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
FAM49B-214ENST00000519540 NEXMIFQ5QGS0 1516 aa25.31■■□□□ 1.64
FAM49B-214ENST00000519540 ERVK-7P63135 1459 aa25.31■■□□□ 1.64
FAM49B-214ENST00000519540 VGFO15240 615 aaPredicted RBP25.29■■□□□ 1.64
FAM49B-214ENST00000519540 MLECQ14165 292 aa25.28■■□□□ 1.64
FAM49B-214ENST00000519540 TMEM131LA2VDJ0 1609 aa25.28■■□□□ 1.64
FAM49B-214ENST00000519540 PER1O15534 1290 aaPredicted RBP25.27■■□□□ 1.64
FAM49B-214ENST00000519540 CNGB1Q14028 1251 aaPredicted RBP25.27■■□□□ 1.64
FAM49B-214ENST00000519540 CDCA8Q53HL2 280 aa25.26■■□□□ 1.63
FAM49B-214ENST00000519540 KTN1Q86UP2 1357 aaKnown RBP25.26■■□□□ 1.63
FAM49B-214ENST00000519540 MYO5BQ9ULV0 1848 aa25.25■■□□□ 1.63
FAM49B-214ENST00000519540 ZFYVE9O95405 1425 aa25.24■■□□□ 1.63
FAM49B-214ENST00000519540 ADGRB1O14514 1584 aa25.24■■□□□ 1.63
FAM49B-214ENST00000519540 SLC24A1O60721 1099 aa25.24■■□□□ 1.63
FAM49B-214ENST00000519540 NUTM2DQ5VT03 806 aaPredicted RBP25.23■■□□□ 1.63
FAM49B-214ENST00000519540 PANK3Q9H999 370 aa25.23■■□□□ 1.63
FAM49B-214ENST00000519540 RALBP1Q15311 655 aa25.22■■□□□ 1.63
FAM49B-214ENST00000519540 SPATA31D1Q6ZQQ2 1576 aa25.22■■□□□ 1.63
FAM49B-214ENST00000519540 MYO3AQ8NEV4 1616 aa25.22■■□□□ 1.63
FAM49B-214ENST00000519540 FAM9BQ8IZU0 186 aa25.2■■□□□ 1.63
FAM49B-214ENST00000519540 HNRNPUQ00839 825 aaKnown RBP eCLIP25.2■■□□□ 1.62
FAM49B-214ENST00000519540 TMEM132EQ6IEE7 984 aa25.19■■□□□ 1.62
FAM49B-214ENST00000519540 SBNO2Q9Y2G9 1366 aa25.18■■□□□ 1.62
FAM49B-214ENST00000519540 ESF1Q9H501 851 aaKnown RBP25.17■■□□□ 1.62
FAM49B-214ENST00000519540 TRAK1Q9UPV9 953 aa25.17■■□□□ 1.62
FAM49B-214ENST00000519540 MYBBP1AQ9BQG0 1328 aaKnown RBP25.16■■□□□ 1.62
FAM49B-214ENST00000519540 CENPJQ9HC77 1338 aaPredicted RBP25.16■■□□□ 1.62
FAM49B-214ENST00000519540 ZMYM3Q14202 1370 aa25.16■■□□□ 1.62
FAM49B-214ENST00000519540 PARD3Q8TEW0 1356 aa25.16■■□□□ 1.62
FAM49B-214ENST00000519540 KDM5AP29375 1690 aaKnown RBP25.15■■□□□ 1.62
FAM49B-214ENST00000519540 STAG3Q9UJ98 1225 aa25.13■■□□□ 1.61
FAM49B-214ENST00000519540 MYOM1P52179 1685 aa25.12■■□□□ 1.61
FAM49B-214ENST00000519540 BRD4O60885 1362 aaPredicted RBP25.12■■□□□ 1.61
FAM49B-214ENST00000519540 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
FAM49B-214ENST00000519540 A2ML1A8K2U0 1454 aa25.11■■□□□ 1.61
FAM49B-214ENST00000519540 TRHP20396 242 aaPredicted RBP25.1■■□□□ 1.61
FAM49B-214ENST00000519540 QRICH2Q9H0J4 1663 aa25.09■■□□□ 1.61
FAM49B-214ENST00000519540 PNISRQ8TF01 805 aaKnown RBP25.08■■□□□ 1.61
FAM49B-214ENST00000519540 CC2D1BQ5T0F9 858 aaKnown RBP25.08■■□□□ 1.61
FAM49B-214ENST00000519540 KNSTRNQ9Y448 316 aa25.06■■□□□ 1.6
FAM49B-214ENST00000519540 ARHGEF28Q8N1W1 1705 aaKnown RBP25.06■■□□□ 1.6
FAM49B-214ENST00000519540 NLRP13Q86W25 1043 aa25.05■■□□□ 1.6
FAM49B-214ENST00000519540 ASXL1Q8IXJ9 1541 aa25.05■■□□□ 1.6
FAM49B-214ENST00000519540 RIMS2Q9UQ26 1411 aa25.02■■□□□ 1.6
FAM49B-214ENST00000519540 AMER1Q5JTC6 1135 aaPredicted RBP25.02■■□□□ 1.6
FAM49B-214ENST00000519540 SENP3Q9H4L4 574 aaPredicted RBP25.02■■□□□ 1.6
FAM49B-214ENST00000519540 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
FAM49B-214ENST00000519540 ZBED9Q6R2W3 1325 aa25■■□□□ 1.59
FAM49B-214ENST00000519540 TNRQ92752 1358 aa25■■□□□ 1.59
FAM49B-214ENST00000519540 LRPPRCP42704 1394 aaKnown RBP24.99■■□□□ 1.59
FAM49B-214ENST00000519540 STK26Q9P289 416 aa24.98■■□□□ 1.59
FAM49B-214ENST00000519540 NPC1L1Q9UHC9 1359 aa24.98■■□□□ 1.59
FAM49B-214ENST00000519540 YTHDC2Q9H6S0 1430 aaKnown RBP24.97■■□□□ 1.59
FAM49B-214ENST00000519540 PUS7Q96PZ0 661 aaKnown RBP24.96■■□□□ 1.59
FAM49B-214ENST00000519540 EVC2Q86UK5 1308 aa24.95■■□□□ 1.58
FAM49B-214ENST00000519540 CARD14Q9BXL6 1004 aa24.95■■□□□ 1.58
FAM49B-214ENST00000519540 PTPRMP28827 1452 aa24.94■■□□□ 1.58
FAM49B-214ENST00000519540 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.94■■□□□ 1.58
FAM49B-214ENST00000519540 TULP4Q9NRJ4 1543 aa24.93■■□□□ 1.58
FAM49B-214ENST00000519540 SUPT16HQ9Y5B9 1047 aaKnown RBP24.91■■□□□ 1.58
FAM49B-214ENST00000519540 SETD1AO15047 1707 aaKnown RBP24.9■■□□□ 1.58
FAM49B-214ENST00000519540 SAFB2Q14151 953 aaKnown RBP eCLIP24.9■■□□□ 1.58
FAM49B-214ENST00000519540 SLC12A5Q9H2X9 1139 aa24.9■■□□□ 1.58
FAM49B-214ENST00000519540 UBR1Q8IWV7 1749 aa24.89■■□□□ 1.58
FAM49B-214ENST00000519540 PPP2R1AP30153 589 aa24.89■■□□□ 1.57
FAM49B-214ENST00000519540 HDGFP51858 240 aaKnown RBP24.89■■□□□ 1.57
FAM49B-214ENST00000519540 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
FAM49B-214ENST00000519540 CEBPAP49715 358 aaPredicted RBP24.88■■□□□ 1.57
FAM49B-214ENST00000519540 POGKQ9P215 609 aa24.87■■□□□ 1.57
FAM49B-214ENST00000519540 NRXN3Q9Y4C0 1643 aa24.87■■□□□ 1.57
FAM49B-214ENST00000519540 NLRP1Q9C000 1473 aa24.86■■□□□ 1.57
FAM49B-214ENST00000519540 C3P01024 1663 aa24.86■■□□□ 1.57
FAM49B-214ENST00000519540 TMEM2Q9UHN6 1383 aa24.85■■□□□ 1.57
FAM49B-214ENST00000519540 DNAJC5Q9H3Z4 198 aa24.85■■□□□ 1.57
FAM49B-214ENST00000519540 FER1L4A9Z1Z3 1794 aa24.85■■□□□ 1.57
FAM49B-214ENST00000519540 CABP2Q9NPB3 220 aa24.84■■□□□ 1.57
FAM49B-214ENST00000519540 DLC1Q96QB1 1528 aa24.84■■□□□ 1.57
FAM49B-214ENST00000519540 MINK1Q8N4C8 1332 aaPredicted RBP24.82■■□□□ 1.56
FAM49B-214ENST00000519540 INSRP06213 1382 aa24.81■■□□□ 1.56
FAM49B-214ENST00000519540 ABCC11Q96J66 1382 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms