RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
SPIDR-210ENST00000519362 FKBP8Q14318 412 aa16.86■□□□□ 0.29
SPIDR-210ENST00000519362 BRD4O60885 1362 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-210ENST00000519362 PARD3Q8TEW0 1356 aa16.86■□□□□ 0.29
SPIDR-210ENST00000519362 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-210ENST00000519362 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
SPIDR-210ENST00000519362 ADGRF5Q8IZF2 1346 aa16.85■□□□□ 0.29
SPIDR-210ENST00000519362 NOS1P29475 1434 aa16.85■□□□□ 0.29
SPIDR-210ENST00000519362 YEATS2Q9ULM3 1422 aa16.85■□□□□ 0.29
SPIDR-210ENST00000519362 ZMYM4Q5VZL5 1548 aa16.85■□□□□ 0.29
SPIDR-210ENST00000519362 ZC3H13Q5T200 1668 aaKnown RBP16.84■□□□□ 0.29
SPIDR-210ENST00000519362 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.29
SPIDR-210ENST00000519362 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.28
SPIDR-210ENST00000519362 NEFLP07196 543 aa16.83■□□□□ 0.28
SPIDR-210ENST00000519362 SIGLEC1Q9BZZ2 1709 aa16.83■□□□□ 0.28
SPIDR-210ENST00000519362 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
SPIDR-210ENST00000519362 TMC1Q8TDI8 760 aa16.82■□□□□ 0.28
SPIDR-210ENST00000519362 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
SPIDR-210ENST00000519362 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
SPIDR-210ENST00000519362 PPLO60437 1756 aa16.82■□□□□ 0.28
SPIDR-210ENST00000519362 CFAP70Q5T0N1 1121 aa16.82■□□□□ 0.28
SPIDR-210ENST00000519362 PANK3Q9H999 370 aa16.82■□□□□ 0.28
SPIDR-210ENST00000519362 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
SPIDR-210ENST00000519362 SETBP1Q9Y6X0 1596 aa16.8■□□□□ 0.28
SPIDR-210ENST00000519362 SYNMO15061 1565 aa16.8■□□□□ 0.28
SPIDR-210ENST00000519362 CDCA8Q53HL2 280 aa16.8■□□□□ 0.28
SPIDR-210ENST00000519362 PIK3C2GO75747 1445 aa16.79■□□□□ 0.28
SPIDR-210ENST00000519362 NLRP13Q86W25 1043 aa16.79■□□□□ 0.28
SPIDR-210ENST00000519362 RPGRIP1LQ68CZ1 1315 aa16.79■□□□□ 0.28
SPIDR-210ENST00000519362 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
SPIDR-210ENST00000519362 MYO3AQ8NEV4 1616 aa16.78■□□□□ 0.28
SPIDR-210ENST00000519362 SLC24A1O60721 1099 aa16.77■□□□□ 0.27
SPIDR-210ENST00000519362 MYOM1P52179 1685 aa16.76■□□□□ 0.27
SPIDR-210ENST00000519362 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
SPIDR-210ENST00000519362 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
SPIDR-210ENST00000519362 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
SPIDR-210ENST00000519362 SBNO2Q9Y2G9 1366 aa16.75■□□□□ 0.27
SPIDR-210ENST00000519362 ADGRB1O14514 1584 aa16.74■□□□□ 0.27
SPIDR-210ENST00000519362 ERVK-7P63135 1459 aa16.74■□□□□ 0.27
SPIDR-210ENST00000519362 BCANQ96GW7 911 aa16.74■□□□□ 0.27
SPIDR-210ENST00000519362 C14orf93Q9H972 538 aaKnown RBP16.74■□□□□ 0.27
SPIDR-210ENST00000519362 CC2D1BQ5T0F9 858 aaKnown RBP16.73■□□□□ 0.27
SPIDR-210ENST00000519362 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
SPIDR-210ENST00000519362 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
SPIDR-210ENST00000519362 TSPOAP1O95153 1857 aa16.72■□□□□ 0.27
SPIDR-210ENST00000519362 PREX1Q8TCU6 1659 aa16.71■□□□□ 0.27
SPIDR-210ENST00000519362 AGLP35573 1532 aa16.71■□□□□ 0.26
SPIDR-210ENST00000519362 SLC52A1Q9NWF4 448 aa16.7■□□□□ 0.26
SPIDR-210ENST00000519362 INSRP06213 1382 aa16.7■□□□□ 0.26
SPIDR-210ENST00000519362 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-210ENST00000519362 IDI1Q13907 227 aa16.69■□□□□ 0.26
SPIDR-210ENST00000519362 KNSTRNQ9Y448 316 aa16.69■□□□□ 0.26
SPIDR-210ENST00000519362 NPC1L1Q9UHC9 1359 aa16.69■□□□□ 0.26
SPIDR-210ENST00000519362 ASXL1Q8IXJ9 1541 aa16.69■□□□□ 0.26
SPIDR-210ENST00000519362 ZFYVE9O95405 1425 aa16.68■□□□□ 0.26
SPIDR-210ENST00000519362 ERICH6BQ5W0A0 696 aa16.68■□□□□ 0.26
SPIDR-210ENST00000519362 CENPJQ9HC77 1338 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-210ENST00000519362 VGFO15240 615 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-210ENST00000519362 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
SPIDR-210ENST00000519362 TMEM131LA2VDJ0 1609 aa16.66■□□□□ 0.26
SPIDR-210ENST00000519362 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
SPIDR-210ENST00000519362 KIF13AQ9H1H9 1805 aa16.65■□□□□ 0.26
SPIDR-210ENST00000519362 QRICH2Q9H0J4 1663 aa16.65■□□□□ 0.26
SPIDR-210ENST00000519362 TRAK1Q9UPV9 953 aa16.63■□□□□ 0.25
SPIDR-210ENST00000519362 BLMP54132 1417 aaPredicted RBP16.63■□□□□ 0.25
SPIDR-210ENST00000519362 TMEM132EQ6IEE7 984 aa16.63■□□□□ 0.25
SPIDR-210ENST00000519362 MYO5BQ9ULV0 1848 aa16.62■□□□□ 0.25
SPIDR-210ENST00000519362 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
SPIDR-210ENST00000519362 IRX6P78412 446 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-210ENST00000519362 ARHGEF28Q8N1W1 1705 aaKnown RBP16.61■□□□□ 0.25
SPIDR-210ENST00000519362 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
SPIDR-210ENST00000519362 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
SPIDR-210ENST00000519362 NUTM2DQ5VT03 806 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-210ENST00000519362 FBXO31Q5XUX0 539 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-210ENST00000519362 CARD14Q9BXL6 1004 aa16.59■□□□□ 0.25
SPIDR-210ENST00000519362 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
SPIDR-210ENST00000519362 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
SPIDR-210ENST00000519362 SPATA31D1Q6ZQQ2 1576 aa16.58■□□□□ 0.24
SPIDR-210ENST00000519362 PDE3BQ13370 1112 aa16.57■□□□□ 0.24
SPIDR-210ENST00000519362 PUS7Q96PZ0 661 aaKnown RBP16.57■□□□□ 0.24
SPIDR-210ENST00000519362 TSHZ2Q9NRE2 1034 aa16.57■□□□□ 0.24
SPIDR-210ENST00000519362 PPP4R2Q9NY27 417 aa16.56■□□□□ 0.24
SPIDR-210ENST00000519362 TULP4Q9NRJ4 1543 aa16.55■□□□□ 0.24
SPIDR-210ENST00000519362 ADAMTS8Q9UP79 889 aa16.54■□□□□ 0.24
SPIDR-210ENST00000519362 USP32Q8NFA0 1604 aa16.52■□□□□ 0.24
SPIDR-210ENST00000519362 EVC2Q86UK5 1308 aa16.52■□□□□ 0.23
SPIDR-210ENST00000519362 A2ML1A8K2U0 1454 aa16.51■□□□□ 0.23
SPIDR-210ENST00000519362 PTPRMP28827 1452 aa16.51■□□□□ 0.23
SPIDR-210ENST00000519362 NSD3Q9BZ95 1437 aa16.51■□□□□ 0.23
SPIDR-210ENST00000519362 SLC12A5Q9H2X9 1139 aa16.51■□□□□ 0.23
SPIDR-210ENST00000519362 ALKQ9UM73 1620 aa16.5■□□□□ 0.23
SPIDR-210ENST00000519362 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
SPIDR-210ENST00000519362 YTHDC2Q9H6S0 1430 aaKnown RBP16.49■□□□□ 0.23
SPIDR-210ENST00000519362 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
SPIDR-210ENST00000519362 MLECQ14165 292 aa16.47■□□□□ 0.23
SPIDR-210ENST00000519362 ANKRD36BQ8N2N9 1353 aa16.47■□□□□ 0.23
SPIDR-210ENST00000519362 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
SPIDR-210ENST00000519362 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
SPIDR-210ENST00000519362 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-210ENST00000519362 ZMYM3Q14202 1370 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms