RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 NLRP1Q9C000 1473 aa20.4■□□□□ 0.86
CLN8-204ENST00000519254 NEXMIFQ5QGS0 1516 aa20.4■□□□□ 0.86
CLN8-204ENST00000519254 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
CLN8-204ENST00000519254 MYO3AQ8NEV4 1616 aa20.4■□□□□ 0.86
CLN8-204ENST00000519254 EIF4G2P78344 907 aaKnown RBP eCLIP20.39■□□□□ 0.86
CLN8-204ENST00000519254 RALGAPBQ86X10 1494 aa20.38■□□□□ 0.85
CLN8-204ENST00000519254 ADGRF5Q8IZF2 1346 aa20.38■□□□□ 0.85
CLN8-204ENST00000519254 UBR1Q8IWV7 1749 aa20.38■□□□□ 0.85
CLN8-204ENST00000519254 TRPM1Q7Z4N2 1603 aa20.37■□□□□ 0.85
CLN8-204ENST00000519254 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
CLN8-204ENST00000519254 STAC3Q96MF2 364 aa20.37■□□□□ 0.85
CLN8-204ENST00000519254 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
CLN8-204ENST00000519254 ROCK2O75116 1388 aaKnown RBP20.36■□□□□ 0.85
CLN8-204ENST00000519254 KDM5AP29375 1690 aaKnown RBP20.34■□□□□ 0.85
CLN8-204ENST00000519254 VGFO15240 615 aaPredicted RBP20.34■□□□□ 0.85
CLN8-204ENST00000519254 RIMS2Q9UQ26 1411 aa20.34■□□□□ 0.85
CLN8-204ENST00000519254 NRXN1Q9ULB1 1477 aa20.33■□□□□ 0.84
CLN8-204ENST00000519254 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.84
CLN8-204ENST00000519254 CARD11Q9BXL7 1154 aa20.32■□□□□ 0.84
CLN8-204ENST00000519254 CEP170BQ9Y4F5 1589 aaPredicted RBP20.32■□□□□ 0.84
CLN8-204ENST00000519254 KDM4FA0A1W2PPD8 638 aa20.31■□□□□ 0.84
CLN8-204ENST00000519254 PIK3C2GO75747 1445 aa20.3■□□□□ 0.84
CLN8-204ENST00000519254 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
CLN8-204ENST00000519254 POLR1AO95602 1720 aaPredicted RBP20.29■□□□□ 0.84
CLN8-204ENST00000519254 ZFYVE9O95405 1425 aa20.29■□□□□ 0.84
CLN8-204ENST00000519254 TMEM2Q9UHN6 1383 aa20.29■□□□□ 0.84
CLN8-204ENST00000519254 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.84
CLN8-204ENST00000519254 KIAA1210Q9ULL0 1709 aa20.27■□□□□ 0.84
CLN8-204ENST00000519254 ZNF142P52746 1687 aaPredicted RBP20.27■□□□□ 0.84
CLN8-204ENST00000519254 USP47Q96K76 1375 aa20.26■□□□□ 0.83
CLN8-204ENST00000519254 THEMISQ8N1K5 641 aaPredicted RBP20.26■□□□□ 0.83
CLN8-204ENST00000519254 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.26■□□□□ 0.83
CLN8-204ENST00000519254 SETD1BQ9UPS6 1966 aaKnown RBP20.25■□□□□ 0.83
CLN8-204ENST00000519254 C11orf95C9JLR9 678 aaPredicted RBP20.25■□□□□ 0.83
CLN8-204ENST00000519254 GPRASP1Q5JY77 1395 aa20.25■□□□□ 0.83
CLN8-204ENST00000519254 HDGFP51858 240 aaKnown RBP20.24■□□□□ 0.83
CLN8-204ENST00000519254 LAMC1P11047 1609 aa20.23■□□□□ 0.83
CLN8-204ENST00000519254 C14orf93Q9H972 538 aaKnown RBP20.23■□□□□ 0.83
CLN8-204ENST00000519254 SLIT1O75093 1534 aa20.22■□□□□ 0.83
CLN8-204ENST00000519254 TXNDC2Q86VQ3 553 aa20.22■□□□□ 0.83
CLN8-204ENST00000519254 BCANQ96GW7 911 aa20.22■□□□□ 0.83
CLN8-204ENST00000519254 EID1Q9Y6B2 187 aa20.21■□□□□ 0.83
CLN8-204ENST00000519254 ARHGAP23Q9P227 1491 aa20.21■□□□□ 0.83
CLN8-204ENST00000519254 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
CLN8-204ENST00000519254 LTKP29376 864 aa20.21■□□□□ 0.83
CLN8-204ENST00000519254 TMEM132EQ6IEE7 984 aa20.2■□□□□ 0.82
CLN8-204ENST00000519254 SETBP1Q9Y6X0 1596 aa20.19■□□□□ 0.82
CLN8-204ENST00000519254 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
CLN8-204ENST00000519254 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
CLN8-204ENST00000519254 ALKQ9UM73 1620 aa20.18■□□□□ 0.82
CLN8-204ENST00000519254 ADGRB1O14514 1584 aa20.17■□□□□ 0.82
CLN8-204ENST00000519254 NRXN3Q9Y4C0 1643 aa20.17■□□□□ 0.82
CLN8-204ENST00000519254 SCAF11Q99590 1463 aaKnown RBP20.17■□□□□ 0.82
CLN8-204ENST00000519254 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
CLN8-204ENST00000519254 KIF7Q2M1P5 1343 aa20.16■□□□□ 0.82
CLN8-204ENST00000519254 ASXL1Q8IXJ9 1541 aa20.15■□□□□ 0.82
CLN8-204ENST00000519254 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
CLN8-204ENST00000519254 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
CLN8-204ENST00000519254 TRAK1Q9UPV9 953 aa20.13■□□□□ 0.81
CLN8-204ENST00000519254 SETD1AO15047 1707 aaKnown RBP20.12■□□□□ 0.81
CLN8-204ENST00000519254 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
CLN8-204ENST00000519254 ANKLE2Q86XL3 938 aa20.12■□□□□ 0.81
CLN8-204ENST00000519254 STK26Q9P289 416 aa20.12■□□□□ 0.81
CLN8-204ENST00000519254 ANP32CO43423 234 aa20.11■□□□□ 0.81
CLN8-204ENST00000519254 SLC26A8Q96RN1 970 aa20.1■□□□□ 0.81
CLN8-204ENST00000519254 ADAMTS13Q76LX8 1427 aa20.1■□□□□ 0.81
CLN8-204ENST00000519254 METP08581 1390 aa20.09■□□□□ 0.81
CLN8-204ENST00000519254 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.81
CLN8-204ENST00000519254 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.8
CLN8-204ENST00000519254 HSPA2P54652 639 aa20.06■□□□□ 0.8
CLN8-204ENST00000519254 NCKAP5LQ9HCH0 1330 aa20.06■□□□□ 0.8
CLN8-204ENST00000519254 ARHGEF28Q8N1W1 1705 aaKnown RBP20.06■□□□□ 0.8
CLN8-204ENST00000519254 POLR3GLQ9BT43 218 aa20.06■□□□□ 0.8
CLN8-204ENST00000519254 LMTK3Q96Q04 1460 aa20.05■□□□□ 0.8
CLN8-204ENST00000519254 CCER2I3L3R5 266 aa20.04■□□□□ 0.8
CLN8-204ENST00000519254 TESK2Q96S53 571 aa20.04■□□□□ 0.8
CLN8-204ENST00000519254 CENPJQ9HC77 1338 aaPredicted RBP20.04■□□□□ 0.8
CLN8-204ENST00000519254 MED14O60244 1454 aa20.03■□□□□ 0.8
CLN8-204ENST00000519254 LRPPRCP42704 1394 aaKnown RBP20.03■□□□□ 0.8
CLN8-204ENST00000519254 DIP2AQ14689 1571 aa20.03■□□□□ 0.8
CLN8-204ENST00000519254 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.8
CLN8-204ENST00000519254 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.8
CLN8-204ENST00000519254 QRICH2Q9H0J4 1663 aa20.02■□□□□ 0.8
CLN8-204ENST00000519254 TBX22Q9Y458 520 aa20.01■□□□□ 0.79
CLN8-204ENST00000519254 DISP3Q9P2K9 1392 aa20■□□□□ 0.79
CLN8-204ENST00000519254 PRAM1Q96QH2 718 aa20■□□□□ 0.79
CLN8-204ENST00000519254 TMF1P82094 1093 aa19.99■□□□□ 0.79
CLN8-204ENST00000519254 POGKQ9P215 609 aa19.99■□□□□ 0.79
CLN8-204ENST00000519254 ABCC11Q96J66 1382 aa19.98■□□□□ 0.79
CLN8-204ENST00000519254 PTPRUQ92729 1446 aa19.97■□□□□ 0.79
CLN8-204ENST00000519254 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
CLN8-204ENST00000519254 KNDC1Q76NI1 1749 aa19.97■□□□□ 0.79
CLN8-204ENST00000519254 WAPLQ7Z5K2 1190 aa19.95■□□□□ 0.78
CLN8-204ENST00000519254 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.78
CLN8-204ENST00000519254 CPS1P31327 1500 aa19.94■□□□□ 0.78
CLN8-204ENST00000519254 AMOTL2Q9Y2J4 779 aa19.94■□□□□ 0.78
CLN8-204ENST00000519254 TECPR2O15040 1411 aa19.94■□□□□ 0.78
CLN8-204ENST00000519254 SBNO2Q9Y2G9 1366 aa19.94■□□□□ 0.78
CLN8-204ENST00000519254 MINK1Q8N4C8 1332 aaPredicted RBP19.93■□□□□ 0.78
CLN8-204ENST00000519254 ROBO2Q9HCK4 1378 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms