RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.92□□□□□ -0.98
SKP1-205ENST00000519054 TMEM134Q9H6X4 195 aa8.92□□□□□ -0.98
SKP1-205ENST00000519054 HPS5Q9UPZ3 1129 aa8.9□□□□□ -0.98
SKP1-205ENST00000519054 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
SKP1-205ENST00000519054 HCSTQ9UBK5 93 aa8.89□□□□□ -0.99
SKP1-205ENST00000519054 WBP1LQ9NX94 342 aa8.88□□□□□ -0.99
SKP1-205ENST00000519054 TSR3Q9UJK0 312 aaKnown RBP8.88□□□□□ -0.99
SKP1-205ENST00000519054 SLC4A3P48751 1232 aa8.87□□□□□ -0.99
SKP1-205ENST00000519054 PPP4CP60510 307 aa8.87□□□□□ -0.99
SKP1-205ENST00000519054 TPRNQ4KMQ1 711 aa8.87□□□□□ -0.99
SKP1-205ENST00000519054 SLF2Q8IX21 1173 aa8.87□□□□□ -0.99
SKP1-205ENST00000519054 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
SKP1-205ENST00000519054 AK7Q96M32 723 aa8.86□□□□□ -0.99
SKP1-205ENST00000519054 DAXXQ9UER7 740 aaPredicted RBP8.85□□□□□ -0.99
SKP1-205ENST00000519054 DDX11L8A8MPP1 907 aa8.83□□□□□ -1
SKP1-205ENST00000519054 TRIM66O15016 1216 aa8.83□□□□□ -1
SKP1-205ENST00000519054 TTLL12Q14166 644 aaPredicted RBP8.82□□□□□ -1
SKP1-205ENST00000519054 SLC10A3P09131 477 aa8.81□□□□□ -1
SKP1-205ENST00000519054 CLCN1P35523 988 aa8.81□□□□□ -1
SKP1-205ENST00000519054 RDH13Q8NBN7 331 aa8.81□□□□□ -1
SKP1-205ENST00000519054 GPCPD1Q9NPB8 672 aa8.81□□□□□ -1
SKP1-205ENST00000519054 APLP1P51693 650 aa8.8□□□□□ -1
SKP1-205ENST00000519054 AMHR2Q16671 573 aa8.8□□□□□ -1
SKP1-205ENST00000519054 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
SKP1-205ENST00000519054 SULF1Q8IWU6 871 aa8.8□□□□□ -1
SKP1-205ENST00000519054 NECTIN2Q92692 538 aa8.8□□□□□ -1
SKP1-205ENST00000519054 REPIN1Q9BWE0 567 aaKnown RBP8.8□□□□□ -1
SKP1-205ENST00000519054 CFHP08603 1231 aa8.79□□□□□ -1
SKP1-205ENST00000519054 RSPH4AQ5TD94 716 aa8.79□□□□□ -1
SKP1-205ENST00000519054 PRKCSHP14314 528 aaPredicted RBP8.78□□□□□ -1
SKP1-205ENST00000519054 TMUB1Q9BVT8 246 aa8.78□□□□□ -1
SKP1-205ENST00000519054 PDE4DQ08499 809 aa8.77□□□□□ -1.01
SKP1-205ENST00000519054 PARP9Q8IXQ6 854 aa8.77□□□□□ -1.01
SKP1-205ENST00000519054 KMT5BQ4FZB7 885 aa8.76□□□□□ -1.01
SKP1-205ENST00000519054 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
SKP1-205ENST00000519054 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
SKP1-205ENST00000519054 PRR14Q9BWN1 585 aa8.75□□□□□ -1.01
SKP1-205ENST00000519054 CD46P15529 392 aa8.74□□□□□ -1.01
SKP1-205ENST00000519054 SSTR3P32745 418 aaPredicted RBP8.74□□□□□ -1.01
SKP1-205ENST00000519054 GCGRP47871 477 aa8.73□□□□□ -1.01
SKP1-205ENST00000519054 ACTN4O43707 911 aaKnown RBP8.72□□□□□ -1.01
SKP1-205ENST00000519054 MTRQ99707 1265 aa8.72□□□□□ -1.01
SKP1-205ENST00000519054 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
SKP1-205ENST00000519054 PCDHB3Q9Y5E6 796 aa8.72□□□□□ -1.01
SKP1-205ENST00000519054 COPS2P61201 443 aa8.71□□□□□ -1.02
SKP1-205ENST00000519054 MS4A1P11836 297 aa8.7□□□□□ -1.02
SKP1-205ENST00000519054 FUT2Q10981 343 aa8.7□□□□□ -1.02
SKP1-205ENST00000519054 PUS10Q3MIT2 529 aaKnown RBP8.7□□□□□ -1.02
SKP1-205ENST00000519054 BLOC1S3Q6QNY0 202 aa8.7□□□□□ -1.02
SKP1-205ENST00000519054 GPBP1L1Q9HC44 474 aaPredicted RBP8.7□□□□□ -1.02
SKP1-205ENST00000519054 TJAP1Q5JTD0 557 aa8.69□□□□□ -1.02
SKP1-205ENST00000519054 ITGBL1O95965 494 aaPredicted RBP8.68□□□□□ -1.02
SKP1-205ENST00000519054 BEGAINQ9BUH8 593 aa8.68□□□□□ -1.02
SKP1-205ENST00000519054 KDM4AO75164 1064 aa8.67□□□□□ -1.02
SKP1-205ENST00000519054 KCNC4Q03721 635 aa8.67□□□□□ -1.02
SKP1-205ENST00000519054 ZNF516Q92618 1163 aa8.67□□□□□ -1.02
SKP1-205ENST00000519054 IL21Q9HBE4 155 aa8.67□□□□□ -1.02
SKP1-205ENST00000519054 ATP6V1AP38606 617 aa8.66□□□□□ -1.02
SKP1-205ENST00000519054 NUTM1Q86Y26 1132 aa8.66□□□□□ -1.02
SKP1-205ENST00000519054 KDM4CQ9H3R0 1056 aa8.66□□□□□ -1.02
SKP1-205ENST00000519054 NEUROD2Q15784 382 aa8.65□□□□□ -1.02
SKP1-205ENST00000519054 NR1I2O75469 434 aa8.64□□□□□ -1.03
SKP1-205ENST00000519054 MORN1Q5T089 497 aa8.64□□□□□ -1.03
SKP1-205ENST00000519054 ZPR1O75312 459 aa8.63□□□□□ -1.03
SKP1-205ENST00000519054 USP46P62068 366 aa8.63□□□□□ -1.03
SKP1-205ENST00000519054 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
SKP1-205ENST00000519054 SPIRE2Q8WWL2 714 aa8.63□□□□□ -1.03
SKP1-205ENST00000519054 HLA-CQ95604 372 aa8.63□□□□□ -1.03
SKP1-205ENST00000519054 HOXA2O43364 376 aa8.62□□□□□ -1.03
SKP1-205ENST00000519054 TLL1O43897 1013 aa8.62□□□□□ -1.03
SKP1-205ENST00000519054 SCUBE3Q8IX30 993 aa8.62□□□□□ -1.03
SKP1-205ENST00000519054 NKX2-3Q8TAU0 364 aa8.62□□□□□ -1.03
SKP1-205ENST00000519054 SLC27A5Q9Y2P5 690 aa8.62□□□□□ -1.03
SKP1-205ENST00000519054 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
SKP1-205ENST00000519054 GUCA2AQ02747 115 aa8.61□□□□□ -1.03
SKP1-205ENST00000519054 IFFO2Q5TF58 517 aa8.61□□□□□ -1.03
SKP1-205ENST00000519054 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
SKP1-205ENST00000519054 FAM117AQ9C073 453 aa8.6□□□□□ -1.03
SKP1-205ENST00000519054 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
SKP1-205ENST00000519054 NDUFV2P19404 249 aa8.59□□□□□ -1.03
SKP1-205ENST00000519054 DIXDC1Q155Q3 683 aa8.57□□□□□ -1.04
SKP1-205ENST00000519054 RNF19BQ6ZMZ0 732 aa8.57□□□□□ -1.04
SKP1-205ENST00000519054 A0A0G2JS52 829 aa8.56□□□□□ -1.04
SKP1-205ENST00000519054 FMNL1O95466 1100 aaPredicted RBP8.56□□□□□ -1.04
SKP1-205ENST00000519054 ADH1BP00325 375 aa8.56□□□□□ -1.04
SKP1-205ENST00000519054 FDX1P10109 184 aa8.56□□□□□ -1.04
SKP1-205ENST00000519054 THAP11Q96EK4 314 aa8.56□□□□□ -1.04
SKP1-205ENST00000519054 DDRGK1Q96HY6 314 aa8.56□□□□□ -1.04
SKP1-205ENST00000519054 SPSB2Q99619 263 aa8.56□□□□□ -1.04
SKP1-205ENST00000519054 Q3C1V9 767 aa8.55□□□□□ -1.04
SKP1-205ENST00000519054 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
SKP1-205ENST00000519054 PCDHGC3Q9UN70 934 aa8.55□□□□□ -1.04
SKP1-205ENST00000519054 PLEKHG3A1L390 1219 aa8.54□□□□□ -1.04
SKP1-205ENST00000519054 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
SKP1-205ENST00000519054 BRICD5Q6PL45 260 aa8.54□□□□□ -1.04
SKP1-205ENST00000519054 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
SKP1-205ENST00000519054 S1PR4O95977 384 aa8.53□□□□□ -1.04
SKP1-205ENST00000519054 PPP1R18Q6NYC8 613 aa8.53□□□□□ -1.04
SKP1-205ENST00000519054 RIC3Q7Z5B4 369 aa8.53□□□□□ -1.04
SKP1-205ENST00000519054 SYMPKQ92797 1274 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms