RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CD46P15529 392 aa7.96□□□□□ -1.14
CTNNA1-212ENST00000518919 PPP4R3BQ5MIZ7 849 aa7.96□□□□□ -1.14
CTNNA1-212ENST00000518919 PPP2R2DQ66LE6 453 aa7.96□□□□□ -1.14
CTNNA1-212ENST00000518919 NUTM1Q86Y26 1132 aa7.96□□□□□ -1.14
CTNNA1-212ENST00000518919 ZSWIM6Q9HCJ5 1215 aa7.96□□□□□ -1.14
CTNNA1-212ENST00000518919 FAM198AQ9UFP1 575 aa7.96□□□□□ -1.14
CTNNA1-212ENST00000518919 NBPF26B4DH59 902 aa7.95□□□□□ -1.14
CTNNA1-212ENST00000518919 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-212ENST00000518919 HRCP23327 699 aa7.95□□□□□ -1.14
CTNNA1-212ENST00000518919 BICRAQ9NZM4 1560 aa7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 DDX11L8A8MPP1 907 aa7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 PPP1R3GB7ZBB8 358 aa7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 SPTLC1O15269 473 aa7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 COL9A1P20849 921 aa7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 DNAJB2P25686 324 aa7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 CSPP1Q1MSJ5 1256 aa7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 TUSC1Q2TAM9 212 aa7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 FBXO31Q5XUX0 539 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 RSBN1LQ6PCB5 846 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 EYA1Q99502 592 aa7.94□□□□□ -1.14
CTNNA1-212ENST00000518919 ZBTB7CA1YPR0 619 aa7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 ZNF710Q8N1W2 664 aa7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 MTMR14Q8NCE2 650 aa7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 BCL2L12Q9HB09 334 aa7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 PLSCR2Q9NRY7 297 aa7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 TSKSQ9UJT2 592 aa7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 LHX6Q9UPM6 363 aa7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 ZNF330Q9Y3S2 320 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 BAZ1AQ9NRL2 1556 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-212ENST00000518919 PSDA5PKW4 1024 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-212ENST00000518919 PTPREP23469 700 aa7.92□□□□□ -1.14
CTNNA1-212ENST00000518919 GPR153Q6NV75 609 aa7.92□□□□□ -1.14
CTNNA1-212ENST00000518919 NUDT18Q6ZVK8 323 aa7.92□□□□□ -1.14
CTNNA1-212ENST00000518919 PNMA3Q9UL41 463 aa7.92□□□□□ -1.14
CTNNA1-212ENST00000518919 MOXD2PA6NHM9 499 aa7.91□□□□□ -1.14
CTNNA1-212ENST00000518919 GDPD2Q9HCC8 539 aa7.91□□□□□ -1.14
CTNNA1-212ENST00000518919 WIZO95785 1651 aa7.9□□□□□ -1.14
CTNNA1-212ENST00000518919 RANGAP1P46060 587 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-212ENST00000518919 RDH13Q8NBN7 331 aa7.9□□□□□ -1.14
CTNNA1-212ENST00000518919 TMEM134Q9H6X4 195 aa7.9□□□□□ -1.14
CTNNA1-212ENST00000518919 PRM3Q9NNZ6 103 aa7.9□□□□□ -1.14
CTNNA1-212ENST00000518919 SMARCA4P51532 1647 aa7.89□□□□□ -1.15
CTNNA1-212ENST00000518919 TRIM6-TRIM34B2RNG4 842 aa7.89□□□□□ -1.15
CTNNA1-212ENST00000518919 SOCS7O14512 581 aa7.89□□□□□ -1.15
CTNNA1-212ENST00000518919 AP1G2O75843 785 aa7.89□□□□□ -1.15
CTNNA1-212ENST00000518919 GJA5P36382 358 aa7.89□□□□□ -1.15
CTNNA1-212ENST00000518919 ABL2P42684 1182 aa7.89□□□□□ -1.15
CTNNA1-212ENST00000518919 QPCTQ16769 361 aa7.89□□□□□ -1.15
CTNNA1-212ENST00000518919 PACS2Q86VP3 889 aa7.89□□□□□ -1.15
CTNNA1-212ENST00000518919 TATDN2Q93075 761 aa7.89□□□□□ -1.15
CTNNA1-212ENST00000518919 C3orf80F5H4A9 247 aa7.88□□□□□ -1.15
CTNNA1-212ENST00000518919 LILRB3O75022 631 aa7.88□□□□□ -1.15
CTNNA1-212ENST00000518919 NDUFV2P19404 249 aa7.88□□□□□ -1.15
CTNNA1-212ENST00000518919 NUTM2BA6NNL0 878 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-212ENST00000518919 NUTM2EB1AL46 878 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-212ENST00000518919 USP17L8P0C7I0 530 aa7.87□□□□□ -1.15
CTNNA1-212ENST00000518919 NUTM2DQ5VT03 806 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-212ENST00000518919 NUTM2AQ8IVF1 878 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-212ENST00000518919 TBC1D2BQ9UPU7 963 aa7.86□□□□□ -1.15
CTNNA1-212ENST00000518919 PCDHB15Q9Y5E8 787 aa7.86□□□□□ -1.15
CTNNA1-212ENST00000518919 SMAPO00193 183 aa7.85□□□□□ -1.15
CTNNA1-212ENST00000518919 KDM4AO75164 1064 aa7.85□□□□□ -1.15
CTNNA1-212ENST00000518919 RTL5Q5HYW3 569 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-212ENST00000518919 SP7Q8TDD2 431 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-212ENST00000518919 CABLES1Q8TDN4 633 aa7.85□□□□□ -1.15
CTNNA1-212ENST00000518919 CALR3Q96L12 384 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-212ENST00000518919 TRAIPQ9BWF2 469 aa7.85□□□□□ -1.15
CTNNA1-212ENST00000518919 SCUBE2Q9NQ36 999 aa7.85□□□□□ -1.15
CTNNA1-212ENST00000518919 EIF4G1Q04637 1599 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-212ENST00000518919 TOP2AP11388 1531 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-212ENST00000518919 USP46P62068 366 aa7.84□□□□□ -1.15
CTNNA1-212ENST00000518919 PROX2Q3B8N5 592 aa7.84□□□□□ -1.15
CTNNA1-212ENST00000518919 PRPF38BQ5VTL8 546 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-212ENST00000518919 NECTIN2Q92692 538 aa7.84□□□□□ -1.15
CTNNA1-212ENST00000518919 KCNH8Q96L42 1107 aa7.84□□□□□ -1.15
CTNNA1-212ENST00000518919 ZBTB3Q9H5J0 574 aa7.84□□□□□ -1.15
CTNNA1-212ENST00000518919 CCDC9Q9Y3X0 531 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-212ENST00000518919 HOXA2O43364 376 aa7.83□□□□□ -1.16
CTNNA1-212ENST00000518919 POTEJP0CG39 1038 aa7.83□□□□□ -1.16
CTNNA1-212ENST00000518919 RSPH4AQ5TD94 716 aa7.83□□□□□ -1.16
CTNNA1-212ENST00000518919 GLMNQ92990 594 aa7.83□□□□□ -1.16
CTNNA1-212ENST00000518919 KCNK17Q96T54 332 aa7.83□□□□□ -1.16
CTNNA1-212ENST00000518919 POM121CA8CG34 1229 aa7.82□□□□□ -1.16
CTNNA1-212ENST00000518919 FDX1P10109 184 aa7.82□□□□□ -1.16
CTNNA1-212ENST00000518919 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
CTNNA1-212ENST00000518919 NDUFB9Q9Y6M9 179 aa7.82□□□□□ -1.16
CTNNA1-212ENST00000518919 KCTD17Q8N5Z5 321 aa7.81□□□□□ -1.16
CTNNA1-212ENST00000518919 GCGRP47871 477 aa7.8□□□□□ -1.16
CTNNA1-212ENST00000518919 MAMSTRQ6ZN01 415 aa7.8□□□□□ -1.16
CTNNA1-212ENST00000518919 PEG3Q9GZU2 1588 aa7.8□□□□□ -1.16
CTNNA1-212ENST00000518919 PPP1R15AO75807 674 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-212ENST00000518919 NPM2Q86SE8 214 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-212ENST00000518919 HELBQ8NG08 1087 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-212ENST00000518919 KIAA1468Q9P260 1216 aa7.79□□□□□ -1.16
CTNNA1-212ENST00000518919 SNPHO15079 494 aa7.78□□□□□ -1.16
CTNNA1-212ENST00000518919 HOXB1P14653 301 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-212ENST00000518919 GUCA2AQ02747 115 aa7.78□□□□□ -1.16
CTNNA1-212ENST00000518919 SWT1Q5T5J6 900 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-212ENST00000518919 AEBP1Q8IUX7 1158 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms