RNA–Protein interactions for RNA: ENST00000518916.5

MSC-AS1-204, MSC antisense RNA 1, humanhuman

TSL 3 BASIC

Gene MSC-AS1, Length 864 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-204ENST00000518916 MYO5BQ9ULV0 1848 aa21.01■□□□□ 0.95
MSC-AS1-204ENST00000518916 MYOM2P54296 1465 aa21.01■□□□□ 0.95
MSC-AS1-204ENST00000518916 PPLO60437 1756 aa21.01■□□□□ 0.95
MSC-AS1-204ENST00000518916 STAG3Q9UJ98 1225 aa21.01■□□□□ 0.95
MSC-AS1-204ENST00000518916 KDM5AP29375 1690 aaKnown RBP21.01■□□□□ 0.95
MSC-AS1-204ENST00000518916 PRAG1Q86YV5 1406 aa21■□□□□ 0.95
MSC-AS1-204ENST00000518916 RPGRIP1LQ68CZ1 1315 aa20.99■□□□□ 0.95
MSC-AS1-204ENST00000518916 RALGAPBQ86X10 1494 aa20.98■□□□□ 0.95
MSC-AS1-204ENST00000518916 NEXMIFQ5QGS0 1516 aa20.97■□□□□ 0.95
MSC-AS1-204ENST00000518916 TRPM1Q7Z4N2 1603 aa20.96■□□□□ 0.95
MSC-AS1-204ENST00000518916 NBPF8Q3BBV2 869 aa20.95■□□□□ 0.94
MSC-AS1-204ENST00000518916 UBR1Q8IWV7 1749 aa20.95■□□□□ 0.94
MSC-AS1-204ENST00000518916 THEMISQ8N1K5 641 aaPredicted RBP20.92■□□□□ 0.94
MSC-AS1-204ENST00000518916 KIAA1210Q9ULL0 1709 aa20.92■□□□□ 0.94
MSC-AS1-204ENST00000518916 ILDR1Q86SU0 546 aaPredicted RBP20.91■□□□□ 0.94
MSC-AS1-204ENST00000518916 NRXN1Q9ULB1 1477 aa20.9■□□□□ 0.94
MSC-AS1-204ENST00000518916 ROCK2O75116 1388 aaKnown RBP20.9■□□□□ 0.94
MSC-AS1-204ENST00000518916 LAMC1P11047 1609 aa20.89■□□□□ 0.94
MSC-AS1-204ENST00000518916 VGFO15240 615 aaPredicted RBP20.89■□□□□ 0.93
MSC-AS1-204ENST00000518916 FBXO41Q8TF61 875 aa20.89■□□□□ 0.93
MSC-AS1-204ENST00000518916 ZFYVE9O95405 1425 aa20.88■□□□□ 0.93
MSC-AS1-204ENST00000518916 NCKAP5LQ9HCH0 1330 aa20.88■□□□□ 0.93
MSC-AS1-204ENST00000518916 RIMS2Q9UQ26 1411 aa20.87■□□□□ 0.93
MSC-AS1-204ENST00000518916 CERKQ8TCT0 537 aa20.87■□□□□ 0.93
MSC-AS1-204ENST00000518916 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
MSC-AS1-204ENST00000518916 MED14O60244 1454 aa20.86■□□□□ 0.93
MSC-AS1-204ENST00000518916 ADGRF5Q8IZF2 1346 aa20.85■□□□□ 0.93
MSC-AS1-204ENST00000518916 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.85■□□□□ 0.93
MSC-AS1-204ENST00000518916 LTBP4Q8N2S1 1624 aa20.85■□□□□ 0.93
MSC-AS1-204ENST00000518916 ZNF316A6NFI3 1004 aaPredicted RBP20.84■□□□□ 0.93
MSC-AS1-204ENST00000518916 HDGFP51858 240 aaKnown RBP20.84■□□□□ 0.93
MSC-AS1-204ENST00000518916 POLR1AO95602 1720 aaPredicted RBP20.84■□□□□ 0.93
MSC-AS1-204ENST00000518916 ANKLE2Q86XL3 938 aa20.83■□□□□ 0.93
MSC-AS1-204ENST00000518916 CARD11Q9BXL7 1154 aa20.83■□□□□ 0.93
MSC-AS1-204ENST00000518916 GPRASP1Q5JY77 1395 aa20.83■□□□□ 0.92
MSC-AS1-204ENST00000518916 TMEM2Q9UHN6 1383 aa20.83■□□□□ 0.92
MSC-AS1-204ENST00000518916 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
MSC-AS1-204ENST00000518916 SLIT1O75093 1534 aa20.81■□□□□ 0.92
MSC-AS1-204ENST00000518916 IQSEC2Q5JU85 1478 aa20.81■□□□□ 0.92
MSC-AS1-204ENST00000518916 ARHGAP23Q9P227 1491 aa20.81■□□□□ 0.92
MSC-AS1-204ENST00000518916 SETBP1Q9Y6X0 1596 aa20.8■□□□□ 0.92
MSC-AS1-204ENST00000518916 NUTM2DQ5VT03 806 aaPredicted RBP20.8■□□□□ 0.92
MSC-AS1-204ENST00000518916 USP47Q96K76 1375 aa20.8■□□□□ 0.92
MSC-AS1-204ENST00000518916 IQGAP1P46940 1657 aa20.77■□□□□ 0.92
MSC-AS1-204ENST00000518916 EID1Q9Y6B2 187 aa20.77■□□□□ 0.92
MSC-AS1-204ENST00000518916 HSPA5P11021 654 aaKnown RBP20.76■□□□□ 0.91
MSC-AS1-204ENST00000518916 NBPF1Q3BBV0 1214 aa20.76■□□□□ 0.91
MSC-AS1-204ENST00000518916 CFAP70Q5T0N1 1121 aa20.76■□□□□ 0.91
MSC-AS1-204ENST00000518916 NPHP4O75161 1426 aaPredicted RBP20.75■□□□□ 0.91
MSC-AS1-204ENST00000518916 SCAF11Q99590 1463 aaKnown RBP20.75■□□□□ 0.91
MSC-AS1-204ENST00000518916 C14orf93Q9H972 538 aaKnown RBP20.74■□□□□ 0.91
MSC-AS1-204ENST00000518916 EIF3AQ14152 1382 aaKnown RBP20.73■□□□□ 0.91
MSC-AS1-204ENST00000518916 ALKQ9UM73 1620 aa20.73■□□□□ 0.91
MSC-AS1-204ENST00000518916 ZNF335Q9H4Z2 1342 aaPredicted RBP20.72■□□□□ 0.91
MSC-AS1-204ENST00000518916 ADGRB1O14514 1584 aa20.72■□□□□ 0.91
MSC-AS1-204ENST00000518916 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
MSC-AS1-204ENST00000518916 NRXN3Q9Y4C0 1643 aa20.71■□□□□ 0.91
MSC-AS1-204ENST00000518916 TXNDC2Q86VQ3 553 aa20.71■□□□□ 0.91
MSC-AS1-204ENST00000518916 LTKP29376 864 aa20.69■□□□□ 0.9
MSC-AS1-204ENST00000518916 BCANQ96GW7 911 aa20.69■□□□□ 0.9
MSC-AS1-204ENST00000518916 SETD1AO15047 1707 aaKnown RBP20.69■□□□□ 0.9
MSC-AS1-204ENST00000518916 HIRIP3Q9BW71 556 aaPredicted RBP20.68■□□□□ 0.9
MSC-AS1-204ENST00000518916 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
MSC-AS1-204ENST00000518916 DIP2AQ14689 1571 aa20.68■□□□□ 0.9
MSC-AS1-204ENST00000518916 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
MSC-AS1-204ENST00000518916 CPS1P31327 1500 aa20.67■□□□□ 0.9
MSC-AS1-204ENST00000518916 ST20-MTHFSA0A0A6YYL1 179 aa20.63■□□□□ 0.89
MSC-AS1-204ENST00000518916 ARHGEF28Q8N1W1 1705 aaKnown RBP20.63■□□□□ 0.89
MSC-AS1-204ENST00000518916 TMEM132EQ6IEE7 984 aa20.62■□□□□ 0.89
MSC-AS1-204ENST00000518916 YTHDC2Q9H6S0 1430 aaKnown RBP20.61■□□□□ 0.89
MSC-AS1-204ENST00000518916 ADAMTS13Q76LX8 1427 aa20.61■□□□□ 0.89
MSC-AS1-204ENST00000518916 KNDC1Q76NI1 1749 aa20.6■□□□□ 0.89
MSC-AS1-204ENST00000518916 QRICH2Q9H0J4 1663 aa20.6■□□□□ 0.89
MSC-AS1-204ENST00000518916 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
MSC-AS1-204ENST00000518916 LRPPRCP42704 1394 aaKnown RBP20.59■□□□□ 0.89
MSC-AS1-204ENST00000518916 DLC1Q96QB1 1528 aa20.58■□□□□ 0.89
MSC-AS1-204ENST00000518916 CENPJQ9HC77 1338 aaPredicted RBP20.57■□□□□ 0.88
MSC-AS1-204ENST00000518916 SLC24A1O60721 1099 aa20.57■□□□□ 0.88
MSC-AS1-204ENST00000518916 STRCP1A6NGW2 1772 aa20.57■□□□□ 0.88
MSC-AS1-204ENST00000518916 STK26Q9P289 416 aa20.56■□□□□ 0.88
MSC-AS1-204ENST00000518916 METP08581 1390 aa20.56■□□□□ 0.88
MSC-AS1-204ENST00000518916 CCDC7Q96M83 1385 aa20.55■□□□□ 0.88
MSC-AS1-204ENST00000518916 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
MSC-AS1-204ENST00000518916 TMF1P82094 1093 aa20.54■□□□□ 0.88
MSC-AS1-204ENST00000518916 TBX22Q9Y458 520 aa20.54■□□□□ 0.88
MSC-AS1-204ENST00000518916 SLC26A8Q96RN1 970 aa20.53■□□□□ 0.88
MSC-AS1-204ENST00000518916 ABCC11Q96J66 1382 aa20.53■□□□□ 0.88
MSC-AS1-204ENST00000518916 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
MSC-AS1-204ENST00000518916 TESK2Q96S53 571 aa20.52■□□□□ 0.88
MSC-AS1-204ENST00000518916 LRRC7Q96NW7 1537 aa20.52■□□□□ 0.87
MSC-AS1-204ENST00000518916 TECPR2O15040 1411 aa20.52■□□□□ 0.87
MSC-AS1-204ENST00000518916 KIF7Q2M1P5 1343 aa20.52■□□□□ 0.87
MSC-AS1-204ENST00000518916 PIK3R4Q99570 1358 aa20.51■□□□□ 0.87
MSC-AS1-204ENST00000518916 CDCA8Q53HL2 280 aa20.5■□□□□ 0.87
MSC-AS1-204ENST00000518916 POGKQ9P215 609 aa20.5■□□□□ 0.87
MSC-AS1-204ENST00000518916 KCNA6P17658 529 aa20.49■□□□□ 0.87
MSC-AS1-204ENST00000518916 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
MSC-AS1-204ENST00000518916 POLR3GLQ9BT43 218 aa20.49■□□□□ 0.87
MSC-AS1-204ENST00000518916 FAM135BQ49AJ0 1406 aa20.49■□□□□ 0.87
MSC-AS1-204ENST00000518916 XRN1Q8IZH2 1706 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms