RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 WASHC2CQ9Y4E1 1318 aa13.4□□□□□ -0.26
MTCL1-207ENST00000518815 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
MTCL1-207ENST00000518815 POLR1AO95602 1720 aaPredicted RBP13.39□□□□□ -0.27
MTCL1-207ENST00000518815 ZC3H13Q5T200 1668 aaKnown RBP13.39□□□□□ -0.27
MTCL1-207ENST00000518815 E9PCH4 1651 aa13.38□□□□□ -0.27
MTCL1-207ENST00000518815 CCDC184Q52MB2 194 aa13.38□□□□□ -0.27
MTCL1-207ENST00000518815 AGLP35573 1532 aa13.38□□□□□ -0.27
MTCL1-207ENST00000518815 GGT6Q6P531 493 aa13.38□□□□□ -0.27
MTCL1-207ENST00000518815 DNAJC5Q9H3Z4 198 aa13.37□□□□□ -0.27
MTCL1-207ENST00000518815 TRPM2O94759 1503 aa13.37□□□□□ -0.27
MTCL1-207ENST00000518815 PTPRTO14522 1441 aa13.37□□□□□ -0.27
MTCL1-207ENST00000518815 SPHKAPQ2M3C7 1700 aa13.37□□□□□ -0.27
MTCL1-207ENST00000518815 EFCAB6Q5THR3 1501 aa13.37□□□□□ -0.27
MTCL1-207ENST00000518815 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
MTCL1-207ENST00000518815 SMG6Q86US8 1419 aaKnown RBP13.37□□□□□ -0.27
MTCL1-207ENST00000518815 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
MTCL1-207ENST00000518815 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
MTCL1-207ENST00000518815 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
MTCL1-207ENST00000518815 PDE3BQ13370 1112 aa13.36□□□□□ -0.27
MTCL1-207ENST00000518815 MLECQ14165 292 aa13.36□□□□□ -0.27
MTCL1-207ENST00000518815 ARHGEF40Q8TER5 1519 aa13.35□□□□□ -0.27
MTCL1-207ENST00000518815 EIF3AQ14152 1382 aaKnown RBP13.35□□□□□ -0.27
MTCL1-207ENST00000518815 PLA2R1Q13018 1463 aa13.34□□□□□ -0.27
MTCL1-207ENST00000518815 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
MTCL1-207ENST00000518815 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
MTCL1-207ENST00000518815 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.27
MTCL1-207ENST00000518815 KNSTRNQ9Y448 316 aa13.33□□□□□ -0.28
MTCL1-207ENST00000518815 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
MTCL1-207ENST00000518815 CEP152O94986 1710 aa13.33□□□□□ -0.28
MTCL1-207ENST00000518815 ABCC3O15438 1527 aa13.32□□□□□ -0.28
MTCL1-207ENST00000518815 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
MTCL1-207ENST00000518815 ARHGAP31Q2M1Z3 1444 aa13.32□□□□□ -0.28
MTCL1-207ENST00000518815 ANP32AP39687 249 aaKnown RBP13.31□□□□□ -0.28
MTCL1-207ENST00000518815 CAMSAP1Q5T5Y3 1602 aa13.31□□□□□ -0.28
MTCL1-207ENST00000518815 NBPF1Q3BBV0 1214 aa13.28□□□□□ -0.28
MTCL1-207ENST00000518815 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
MTCL1-207ENST00000518815 CC2D1BQ5T0F9 858 aaKnown RBP13.28□□□□□ -0.28
MTCL1-207ENST00000518815 COL17A1Q9UMD9 1497 aaPredicted RBP13.28□□□□□ -0.28
MTCL1-207ENST00000518815 PANK3Q9H999 370 aa13.27□□□□□ -0.29
MTCL1-207ENST00000518815 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
MTCL1-207ENST00000518815 TNNT2P45379 298 aaPredicted RBP13.27□□□□□ -0.29
MTCL1-207ENST00000518815 KIF1BO60333 1816 aa13.27□□□□□ -0.29
MTCL1-207ENST00000518815 CLTCL1P53675 1640 aa13.27□□□□□ -0.29
MTCL1-207ENST00000518815 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
MTCL1-207ENST00000518815 SAFB2Q14151 953 aaKnown RBP eCLIP13.25□□□□□ -0.296e-6■■■□□ 18.6
MTCL1-207ENST00000518815 NPATQ14207 1427 aa13.25□□□□□ -0.29
MTCL1-207ENST00000518815 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
MTCL1-207ENST00000518815 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
MTCL1-207ENST00000518815 LAMC1P11047 1609 aa13.24□□□□□ -0.29
MTCL1-207ENST00000518815 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
MTCL1-207ENST00000518815 NOS1P29475 1434 aa13.24□□□□□ -0.29
MTCL1-207ENST00000518815 PARD3Q8TEW0 1356 aa13.24□□□□□ -0.29
MTCL1-207ENST00000518815 INSRP06213 1382 aa13.24□□□□□ -0.29
MTCL1-207ENST00000518815 PPM1GO15355 546 aaPredicted RBP13.23□□□□□ -0.29
MTCL1-207ENST00000518815 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
MTCL1-207ENST00000518815 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.23□□□□□ -0.29
MTCL1-207ENST00000518815 TRPM1Q7Z4N2 1603 aa13.23□□□□□ -0.29
MTCL1-207ENST00000518815 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
MTCL1-207ENST00000518815 POGKQ9P215 609 aa13.22□□□□□ -0.29
MTCL1-207ENST00000518815 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
MTCL1-207ENST00000518815 SCAF11Q99590 1463 aaKnown RBP13.21□□□□□ -0.29
MTCL1-207ENST00000518815 C14orf37Q86TY3 774 aa13.21□□□□□ -0.3
MTCL1-207ENST00000518815 PIK3C2BO00750 1634 aa13.21□□□□□ -0.3
MTCL1-207ENST00000518815 DEKP35659 375 aaKnown RBP13.2□□□□□ -0.3
MTCL1-207ENST00000518815 TESK2Q96S53 571 aa13.2□□□□□ -0.3
MTCL1-207ENST00000518815 SLC52A1Q9NWF4 448 aa13.2□□□□□ -0.3
MTCL1-207ENST00000518815 RPGRIP1LQ68CZ1 1315 aa13.2□□□□□ -0.3
MTCL1-207ENST00000518815 MYOM2P54296 1465 aa13.2□□□□□ -0.3
MTCL1-207ENST00000518815 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
MTCL1-207ENST00000518815 PREX1Q8TCU6 1659 aa13.19□□□□□ -0.3
MTCL1-207ENST00000518815 STK26Q9P289 416 aa13.19□□□□□ -0.3
MTCL1-207ENST00000518815 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
MTCL1-207ENST00000518815 RRP1P56182 461 aaKnown RBP13.19□□□□□ -0.3
MTCL1-207ENST00000518815 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
MTCL1-207ENST00000518815 ZBTB7CA1YPR0 619 aa13.18□□□□□ -0.3
MTCL1-207ENST00000518815 IFT172Q9UG01 1749 aa13.17□□□□□ -0.3
MTCL1-207ENST00000518815 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
MTCL1-207ENST00000518815 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
MTCL1-207ENST00000518815 RNF123Q5XPI4 1314 aa13.17□□□□□ -0.3
MTCL1-207ENST00000518815 CLTCQ00610 1675 aaKnown RBP13.17□□□□□ -0.3
MTCL1-207ENST00000518815 SIGLEC1Q9BZZ2 1709 aa13.17□□□□□ -0.3
MTCL1-207ENST00000518815 NGEFQ8N5V2 710 aa13.17□□□□□ -0.3
MTCL1-207ENST00000518815 MROH2AA6NES4 1674 aa13.16□□□□□ -0.3
MTCL1-207ENST00000518815 MADDQ8WXG6 1647 aa13.16□□□□□ -0.3
MTCL1-207ENST00000518815 SYNMO15061 1565 aa13.16□□□□□ -0.3
MTCL1-207ENST00000518815 ERVK-7P63135 1459 aa13.15□□□□□ -0.3
MTCL1-207ENST00000518815 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
MTCL1-207ENST00000518815 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
MTCL1-207ENST00000518815 SRPK2P78362 688 aaKnown RBP13.13□□□□□ -0.31
MTCL1-207ENST00000518815 NRXN1Q9ULB1 1477 aa13.13□□□□□ -0.31
MTCL1-207ENST00000518815 PPLO60437 1756 aa13.13□□□□□ -0.31
MTCL1-207ENST00000518815 CFAP53Q96M91 514 aa13.13□□□□□ -0.31
MTCL1-207ENST00000518815 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
MTCL1-207ENST00000518815 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
MTCL1-207ENST00000518815 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
MTCL1-207ENST00000518815 LAS1LQ9Y4W2 734 aaKnown RBP13.12□□□□□ -0.31
MTCL1-207ENST00000518815 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
MTCL1-207ENST00000518815 NPC1L1Q9UHC9 1359 aa13.11□□□□□ -0.31
MTCL1-207ENST00000518815 ZFYVE9O95405 1425 aa13.11□□□□□ -0.31
MTCL1-207ENST00000518815 GOLGA2Q08379 1002 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms