RNA–Protein interactions for RNA: ENST00000517957.1

PDGFRB-204, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 4

Gene PDGFRB, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-204ENST00000517957 TMEM131LA2VDJ0 1609 aa18.82■□□□□ 0.6
PDGFRB-204ENST00000517957 MYO5BQ9ULV0 1848 aa18.82■□□□□ 0.6
PDGFRB-204ENST00000517957 PIP4K2BP78356 416 aa18.82■□□□□ 0.6
PDGFRB-204ENST00000517957 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
PDGFRB-204ENST00000517957 KCNA6P17658 529 aa18.8■□□□□ 0.6
PDGFRB-204ENST00000517957 SLC4A1APQ9BWU0 796 aaKnown RBP18.8■□□□□ 0.6
PDGFRB-204ENST00000517957 STRCP1A6NGW2 1772 aa18.8■□□□□ 0.6
PDGFRB-204ENST00000517957 LRRC7Q96NW7 1537 aa18.79■□□□□ 0.6
PDGFRB-204ENST00000517957 NUTM2DQ5VT03 806 aaPredicted RBP18.79■□□□□ 0.6
PDGFRB-204ENST00000517957 ZFYVE9O95405 1425 aa18.79■□□□□ 0.6
PDGFRB-204ENST00000517957 PLEKHG1Q9ULL1 1385 aa18.79■□□□□ 0.6
PDGFRB-204ENST00000517957 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
PDGFRB-204ENST00000517957 SPHKAPQ2M3C7 1700 aa18.77■□□□□ 0.59
PDGFRB-204ENST00000517957 PROSER2Q86WR7 435 aaPredicted RBP18.76■□□□□ 0.59
PDGFRB-204ENST00000517957 TBX22Q9Y458 520 aa18.75■□□□□ 0.59
PDGFRB-204ENST00000517957 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
PDGFRB-204ENST00000517957 TMEM94Q12767 1356 aa18.7■□□□□ 0.58
PDGFRB-204ENST00000517957 HSPA1LP34931 641 aa18.69■□□□□ 0.58
PDGFRB-204ENST00000517957 RBM33Q96EV2 1170 aaKnown RBP18.69■□□□□ 0.58
PDGFRB-204ENST00000517957 TRPM2O94759 1503 aa18.69■□□□□ 0.58
PDGFRB-204ENST00000517957 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
PDGFRB-204ENST00000517957 KIF1BO60333 1816 aa18.67■□□□□ 0.58
PDGFRB-204ENST00000517957 CLTCL1P53675 1640 aa18.67■□□□□ 0.58
PDGFRB-204ENST00000517957 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
PDGFRB-204ENST00000517957 NKTRP30414 1462 aaKnown RBP18.66■□□□□ 0.58
PDGFRB-204ENST00000517957 CHD2O14647 1828 aaKnown RBP18.66■□□□□ 0.58
PDGFRB-204ENST00000517957 FOXD1Q16676 465 aa18.66■□□□□ 0.58
PDGFRB-204ENST00000517957 ADAMTS13Q76LX8 1427 aa18.66■□□□□ 0.58
PDGFRB-204ENST00000517957 XIRP1Q702N8 1843 aaKnown RBP18.65■□□□□ 0.58
PDGFRB-204ENST00000517957 PIK3R4Q99570 1358 aa18.65■□□□□ 0.58
PDGFRB-204ENST00000517957 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
PDGFRB-204ENST00000517957 NWD1Q149M9 1564 aa18.64■□□□□ 0.58
PDGFRB-204ENST00000517957 VGFO15240 615 aaPredicted RBP18.64■□□□□ 0.57
PDGFRB-204ENST00000517957 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
PDGFRB-204ENST00000517957 DIP2AQ14689 1571 aa18.64■□□□□ 0.57
PDGFRB-204ENST00000517957 ALKQ9UM73 1620 aa18.63■□□□□ 0.57
PDGFRB-204ENST00000517957 AMOTL2Q9Y2J4 779 aa18.63■□□□□ 0.57
PDGFRB-204ENST00000517957 MSH6P52701 1360 aa18.63■□□□□ 0.57
PDGFRB-204ENST00000517957 RPGRIP1LQ68CZ1 1315 aa18.62■□□□□ 0.57
PDGFRB-204ENST00000517957 CCDC144AA2RUR9 1427 aa18.59■□□□□ 0.57
PDGFRB-204ENST00000517957 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.57
PDGFRB-204ENST00000517957 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.56
PDGFRB-204ENST00000517957 NEXMIFQ5QGS0 1516 aa18.58■□□□□ 0.56
PDGFRB-204ENST00000517957 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
PDGFRB-204ENST00000517957 RGL3Q3MIN7 710 aa18.57■□□□□ 0.56
PDGFRB-204ENST00000517957 SLAIN2Q9P270 581 aa18.57■□□□□ 0.56
PDGFRB-204ENST00000517957 FAM135BQ49AJ0 1406 aa18.57■□□□□ 0.56
PDGFRB-204ENST00000517957 C19orf44Q9H6X5 657 aa18.56■□□□□ 0.56
PDGFRB-204ENST00000517957 ATF3P18847 181 aa18.55■□□□□ 0.56
PDGFRB-204ENST00000517957 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
PDGFRB-204ENST00000517957 METP08581 1390 aa18.55■□□□□ 0.56
PDGFRB-204ENST00000517957 NRXN3Q9Y4C0 1643 aa18.54■□□□□ 0.56
PDGFRB-204ENST00000517957 CADPS2Q86UW7 1296 aa18.54■□□□□ 0.56
PDGFRB-204ENST00000517957 HRCP23327 699 aa18.51■□□□□ 0.55
PDGFRB-204ENST00000517957 PPLO60437 1756 aa18.48■□□□□ 0.55
PDGFRB-204ENST00000517957 ROBO1Q9Y6N7 1651 aa18.48■□□□□ 0.55
PDGFRB-204ENST00000517957 ANKRD30BQ9BXX2 1392 aa18.48■□□□□ 0.55
PDGFRB-204ENST00000517957 SPATA31E1Q6ZUB1 1445 aa18.48■□□□□ 0.55
PDGFRB-204ENST00000517957 ADGRF5Q8IZF2 1346 aa18.47■□□□□ 0.55
PDGFRB-204ENST00000517957 XRN1Q8IZH2 1706 aaKnown RBP18.46■□□□□ 0.55
PDGFRB-204ENST00000517957 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.46■□□□□ 0.55
PDGFRB-204ENST00000517957 ILDR2Q71H61 639 aa18.45■□□□□ 0.54
PDGFRB-204ENST00000517957 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
PDGFRB-204ENST00000517957 MED1Q15648 1581 aaPredicted RBP18.42■□□□□ 0.54
PDGFRB-204ENST00000517957 DCCP43146 1447 aa18.41■□□□□ 0.54
PDGFRB-204ENST00000517957 STK26Q9P289 416 aa18.4■□□□□ 0.54
PDGFRB-204ENST00000517957 SETD1AO15047 1707 aaKnown RBP18.39■□□□□ 0.53
PDGFRB-204ENST00000517957 ROBO2Q9HCK4 1378 aa18.39■□□□□ 0.53
PDGFRB-204ENST00000517957 PTCH1Q13635 1447 aa18.39■□□□□ 0.53
PDGFRB-204ENST00000517957 ADGRL3Q9HAR2 1447 aa18.39■□□□□ 0.53
PDGFRB-204ENST00000517957 PHLPP1O60346 1717 aa18.38■□□□□ 0.53
PDGFRB-204ENST00000517957 TMEM132EQ6IEE7 984 aa18.38■□□□□ 0.53
PDGFRB-204ENST00000517957 BRINP3Q76B58 766 aa18.38■□□□□ 0.53
PDGFRB-204ENST00000517957 IFT172Q9UG01 1749 aa18.37■□□□□ 0.53
PDGFRB-204ENST00000517957 C14orf93Q9H972 538 aaKnown RBP18.36■□□□□ 0.53
PDGFRB-204ENST00000517957 JCADQ9P266 1359 aa18.36■□□□□ 0.53
PDGFRB-204ENST00000517957 PIK3C2GO75747 1445 aa18.35■□□□□ 0.53
PDGFRB-204ENST00000517957 MST1RQ04912 1400 aa18.34■□□□□ 0.53
PDGFRB-204ENST00000517957 PRAG1Q86YV5 1406 aa18.34■□□□□ 0.53
PDGFRB-204ENST00000517957 LRPPRCP42704 1394 aaKnown RBP18.33■□□□□ 0.53
PDGFRB-204ENST00000517957 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.52
PDGFRB-204ENST00000517957 KDM2AQ9Y2K7 1162 aa18.33■□□□□ 0.52
PDGFRB-204ENST00000517957 NALCNQ8IZF0 1738 aa18.32■□□□□ 0.52
PDGFRB-204ENST00000517957 ABCC11Q96J66 1382 aa18.32■□□□□ 0.52
PDGFRB-204ENST00000517957 SOCS7O14512 581 aa18.32■□□□□ 0.52
PDGFRB-204ENST00000517957 WAPLQ7Z5K2 1190 aa18.32■□□□□ 0.52
PDGFRB-204ENST00000517957 DCAF11Q8TEB1 546 aa18.32■□□□□ 0.52
PDGFRB-204ENST00000517957 STAC3Q96MF2 364 aa18.32■□□□□ 0.52
PDGFRB-204ENST00000517957 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
PDGFRB-204ENST00000517957 MYOM2P54296 1465 aa18.31■□□□□ 0.52
PDGFRB-204ENST00000517957 YTHDC2Q9H6S0 1430 aaKnown RBP18.3■□□□□ 0.52
PDGFRB-204ENST00000517957 AHDC1Q5TGY3 1603 aaPredicted RBP18.3■□□□□ 0.52
PDGFRB-204ENST00000517957 ASXL1Q8IXJ9 1541 aa18.29■□□□□ 0.52
PDGFRB-204ENST00000517957 LRRC59Q96AG4 307 aaKnown RBP18.29■□□□□ 0.52
PDGFRB-204ENST00000517957 SIRT1Q96EB6 747 aa18.29■□□□□ 0.52
PDGFRB-204ENST00000517957 COL16A1Q07092 1604 aaPredicted RBP18.29■□□□□ 0.52
PDGFRB-204ENST00000517957 SPATA31A6Q5VVP1 1343 aa18.28■□□□□ 0.52
PDGFRB-204ENST00000517957 C1orf167Q5SNV9 1468 aa18.28■□□□□ 0.52
PDGFRB-204ENST00000517957 NRXN1Q9ULB1 1477 aa18.28■□□□□ 0.52
PDGFRB-204ENST00000517957 TECPR2O15040 1411 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms