RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 THEMISQ8N1K5 641 aaPredicted RBP17.32■□□□□ 0.36
AP3B1-203ENST00000517940 MED14O60244 1454 aa17.31■□□□□ 0.36
AP3B1-203ENST00000517940 IQGAP1P46940 1657 aa17.31■□□□□ 0.36
AP3B1-203ENST00000517940 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
AP3B1-203ENST00000517940 NCKAP5LQ9HCH0 1330 aa17.3■□□□□ 0.36
AP3B1-203ENST00000517940 NRXN1Q9ULB1 1477 aa17.3■□□□□ 0.36
AP3B1-203ENST00000517940 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
AP3B1-203ENST00000517940 NUTM2DQ5VT03 806 aaPredicted RBP17.28■□□□□ 0.36
AP3B1-203ENST00000517940 MYOM2P54296 1465 aa17.28■□□□□ 0.36
AP3B1-203ENST00000517940 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.36
AP3B1-203ENST00000517940 STAG3Q9UJ98 1225 aa17.27■□□□□ 0.36
AP3B1-203ENST00000517940 SETBP1Q9Y6X0 1596 aa17.27■□□□□ 0.35
AP3B1-203ENST00000517940 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
AP3B1-203ENST00000517940 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
AP3B1-203ENST00000517940 NPHP4O75161 1426 aaPredicted RBP17.25■□□□□ 0.35
AP3B1-203ENST00000517940 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
AP3B1-203ENST00000517940 TXNDC2Q86VQ3 553 aa17.25■□□□□ 0.35
AP3B1-203ENST00000517940 PLEKHG1Q9ULL1 1385 aa17.25■□□□□ 0.35
AP3B1-203ENST00000517940 ZNF326Q5BKZ1 582 aaKnown RBP17.24■□□□□ 0.35
AP3B1-203ENST00000517940 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
AP3B1-203ENST00000517940 ASXL1Q8IXJ9 1541 aa17.24■□□□□ 0.35
AP3B1-203ENST00000517940 RPGRIP1LQ68CZ1 1315 aa17.23■□□□□ 0.35
AP3B1-203ENST00000517940 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
AP3B1-203ENST00000517940 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
AP3B1-203ENST00000517940 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
AP3B1-203ENST00000517940 STRCP1A6NGW2 1772 aa17.22■□□□□ 0.35
AP3B1-203ENST00000517940 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
AP3B1-203ENST00000517940 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
AP3B1-203ENST00000517940 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
AP3B1-203ENST00000517940 DIP2AQ14689 1571 aa17.19■□□□□ 0.34
AP3B1-203ENST00000517940 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
AP3B1-203ENST00000517940 DCAF11Q8TEB1 546 aa17.18■□□□□ 0.34
AP3B1-203ENST00000517940 EID1Q9Y6B2 187 aa17.18■□□□□ 0.34
AP3B1-203ENST00000517940 ADGRB1O14514 1584 aa17.16■□□□□ 0.34
AP3B1-203ENST00000517940 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
AP3B1-203ENST00000517940 TRPM1Q7Z4N2 1603 aa17.15■□□□□ 0.34
AP3B1-203ENST00000517940 CHD2O14647 1828 aaKnown RBP17.15■□□□□ 0.34
AP3B1-203ENST00000517940 XRN1Q8IZH2 1706 aaKnown RBP17.15■□□□□ 0.34
AP3B1-203ENST00000517940 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
AP3B1-203ENST00000517940 METP08581 1390 aa17.15■□□□□ 0.34
AP3B1-203ENST00000517940 LAMC1P11047 1609 aa17.14■□□□□ 0.33
AP3B1-203ENST00000517940 KIAA1210Q9ULL0 1709 aa17.14■□□□□ 0.33
AP3B1-203ENST00000517940 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.33
AP3B1-203ENST00000517940 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
AP3B1-203ENST00000517940 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
AP3B1-203ENST00000517940 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
AP3B1-203ENST00000517940 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
AP3B1-203ENST00000517940 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
AP3B1-203ENST00000517940 LTBP4Q8N2S1 1624 aa17.12■□□□□ 0.33
AP3B1-203ENST00000517940 CFAP70Q5T0N1 1121 aa17.11■□□□□ 0.33
AP3B1-203ENST00000517940 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
AP3B1-203ENST00000517940 C14orf93Q9H972 538 aaKnown RBP17.1■□□□□ 0.33
AP3B1-203ENST00000517940 TBX22Q9Y458 520 aa17.1■□□□□ 0.33
AP3B1-203ENST00000517940 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
AP3B1-203ENST00000517940 KNDC1Q76NI1 1749 aa17.09■□□□□ 0.33
AP3B1-203ENST00000517940 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
AP3B1-203ENST00000517940 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
AP3B1-203ENST00000517940 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
AP3B1-203ENST00000517940 NBPF1Q3BBV0 1214 aa17.06■□□□□ 0.32
AP3B1-203ENST00000517940 PIK3R4Q99570 1358 aa17.05■□□□□ 0.32
AP3B1-203ENST00000517940 TMEM132EQ6IEE7 984 aa17.05■□□□□ 0.32
AP3B1-203ENST00000517940 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
AP3B1-203ENST00000517940 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
AP3B1-203ENST00000517940 CPS1P31327 1500 aa17.05■□□□□ 0.32
AP3B1-203ENST00000517940 TECPR2O15040 1411 aa17.04■□□□□ 0.32
AP3B1-203ENST00000517940 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
AP3B1-203ENST00000517940 GPRASP1Q5JY77 1395 aa17.03■□□□□ 0.32
AP3B1-203ENST00000517940 YTHDC2Q9H6S0 1430 aaKnown RBP17.03■□□□□ 0.32
AP3B1-203ENST00000517940 LRPPRCP42704 1394 aaKnown RBP17.02■□□□□ 0.32
AP3B1-203ENST00000517940 NKTRP30414 1462 aaKnown RBP17.02■□□□□ 0.32
AP3B1-203ENST00000517940 KCNA6P17658 529 aa17.02■□□□□ 0.32
AP3B1-203ENST00000517940 BCANQ96GW7 911 aa17.02■□□□□ 0.32
AP3B1-203ENST00000517940 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.31
AP3B1-203ENST00000517940 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
AP3B1-203ENST00000517940 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
AP3B1-203ENST00000517940 DLC1Q96QB1 1528 aa17■□□□□ 0.31
AP3B1-203ENST00000517940 ABCC11Q96J66 1382 aa16.99■□□□□ 0.31
AP3B1-203ENST00000517940 NALCNQ8IZF0 1738 aa16.99■□□□□ 0.31
AP3B1-203ENST00000517940 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.99■□□□□ 0.31
AP3B1-203ENST00000517940 AMOTL2Q9Y2J4 779 aa16.98■□□□□ 0.31
AP3B1-203ENST00000517940 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
AP3B1-203ENST00000517940 ROCK2O75116 1388 aaKnown RBP16.95■□□□□ 0.3
AP3B1-203ENST00000517940 RBM33Q96EV2 1170 aaKnown RBP16.95■□□□□ 0.3
AP3B1-203ENST00000517940 STK26Q9P289 416 aa16.94■□□□□ 0.3
AP3B1-203ENST00000517940 FAM135BQ49AJ0 1406 aa16.94■□□□□ 0.3
AP3B1-203ENST00000517940 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
AP3B1-203ENST00000517940 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
AP3B1-203ENST00000517940 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
AP3B1-203ENST00000517940 QRICH2Q9H0J4 1663 aa16.91■□□□□ 0.3
AP3B1-203ENST00000517940 ADGRB2O60241 1585 aa16.89■□□□□ 0.3
AP3B1-203ENST00000517940 ADGRL3Q9HAR2 1447 aa16.88■□□□□ 0.29
AP3B1-203ENST00000517940 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
AP3B1-203ENST00000517940 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
AP3B1-203ENST00000517940 PROSER2Q86WR7 435 aaPredicted RBP16.87■□□□□ 0.29
AP3B1-203ENST00000517940 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
AP3B1-203ENST00000517940 NCOA3Q9Y6Q9 1424 aa16.87■□□□□ 0.29
AP3B1-203ENST00000517940 CDC42BPGQ6DT37 1551 aa16.86■□□□□ 0.29
AP3B1-203ENST00000517940 IQSEC2Q5JU85 1478 aa16.86■□□□□ 0.29
AP3B1-203ENST00000517940 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
AP3B1-203ENST00000517940 USP47Q96K76 1375 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms