RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CHGAP10645 457 aaKnown RBP36.38■■■■□ 3.41
COL13A1-210ENST00000517713 NRXN1Q9ULB1 1477 aa36.35■■■■□ 3.41
COL13A1-210ENST00000517713 KIF13AQ9H1H9 1805 aa36.34■■■■□ 3.41
COL13A1-210ENST00000517713 HNRNPUQ00839 825 aaKnown RBP eCLIP36.33■■■■□ 3.41
COL13A1-210ENST00000517713 CNGB1Q14028 1251 aaPredicted RBP36.33■■■■□ 3.41
COL13A1-210ENST00000517713 CFAP70Q5T0N1 1121 aa36.32■■■■□ 3.4
COL13A1-210ENST00000517713 SYNMO15061 1565 aa36.31■■■■□ 3.4
COL13A1-210ENST00000517713 PIK3C2BO00750 1634 aa36.31■■■■□ 3.4
COL13A1-210ENST00000517713 PPLO60437 1756 aa36.29■■■■□ 3.4
COL13A1-210ENST00000517713 EIF3AQ14152 1382 aaKnown RBP36.29■■■■□ 3.4
COL13A1-210ENST00000517713 REREQ9P2R6 1566 aa36.29■■■■□ 3.4
COL13A1-210ENST00000517713 RPGRIP1LQ68CZ1 1315 aa36.28■■■■□ 3.4
COL13A1-210ENST00000517713 FAM9BQ8IZU0 186 aa36.28■■■■□ 3.4
COL13A1-210ENST00000517713 KTN1Q86UP2 1357 aaKnown RBP36.27■■■■□ 3.4
COL13A1-210ENST00000517713 AGLP35573 1532 aa36.23■■■■□ 3.39
COL13A1-210ENST00000517713 RALBP1Q15311 655 aa36.22■■■■□ 3.39
COL13A1-210ENST00000517713 PER1O15534 1290 aaPredicted RBP36.2■■■■□ 3.39
COL13A1-210ENST00000517713 PIK3C2GO75747 1445 aa36.19■■■■□ 3.38
COL13A1-210ENST00000517713 CDCA8Q53HL2 280 aa36.18■■■■□ 3.38
COL13A1-210ENST00000517713 PREX1Q8TCU6 1659 aa36.18■■■■□ 3.38
COL13A1-210ENST00000517713 SETBP1Q9Y6X0 1596 aa36.18■■■■□ 3.38
COL13A1-210ENST00000517713 SLC52A1Q9NWF4 448 aa36.17■■■■□ 3.38
COL13A1-210ENST00000517713 PANK3Q9H999 370 aa36.17■■■■□ 3.38
COL13A1-210ENST00000517713 IDI1Q13907 227 aa36.15■■■■□ 3.38
COL13A1-210ENST00000517713 MYBBP1AQ9BQG0 1328 aaKnown RBP36.15■■■■□ 3.38
COL13A1-210ENST00000517713 PPP6R1Q9UPN7 881 aa36.15■■■■□ 3.38
COL13A1-210ENST00000517713 C14orf93Q9H972 538 aaKnown RBP36.13■■■■□ 3.38
COL13A1-210ENST00000517713 SLC24A1O60721 1099 aa36.12■■■■□ 3.37
COL13A1-210ENST00000517713 NEXMIFQ5QGS0 1516 aa36.11■■■■□ 3.37
COL13A1-210ENST00000517713 PARD3Q8TEW0 1356 aa36.1■■■■□ 3.37
COL13A1-210ENST00000517713 TMC1Q8TDI8 760 aa36.1■■■■□ 3.37
COL13A1-210ENST00000517713 ARHGEF40Q8TER5 1519 aa36.09■■■■□ 3.37
COL13A1-210ENST00000517713 SUPT16HQ9Y5B9 1047 aaKnown RBP36.09■■■■□ 3.37
COL13A1-210ENST00000517713 BRD4O60885 1362 aaPredicted RBP36.09■■■■□ 3.37
COL13A1-210ENST00000517713 VGFO15240 615 aaPredicted RBP36.08■■■■□ 3.37
COL13A1-210ENST00000517713 MYO3AQ8NEV4 1616 aa36.08■■■■□ 3.37
COL13A1-210ENST00000517713 ADGRB1O14514 1584 aa36.05■■■■□ 3.36
COL13A1-210ENST00000517713 KDM5AP29375 1690 aaKnown RBP36.04■■■■□ 3.36
COL13A1-210ENST00000517713 ERVK-7P63135 1459 aa36.04■■■■□ 3.36
COL13A1-210ENST00000517713 PNISRQ8TF01 805 aaKnown RBP36.03■■■■□ 3.36
COL13A1-210ENST00000517713 CLTCQ00610 1675 aaKnown RBP36.03■■■■□ 3.36
COL13A1-210ENST00000517713 FBXO31Q5XUX0 539 aaPredicted RBP36.03■■■■□ 3.36
COL13A1-210ENST00000517713 ZBED9Q6R2W3 1325 aa36.03■■■■□ 3.36
COL13A1-210ENST00000517713 TMEM131LA2VDJ0 1609 aa36.02■■■■□ 3.36
COL13A1-210ENST00000517713 NUTM2DQ5VT03 806 aaPredicted RBP36■■■■□ 3.35
COL13A1-210ENST00000517713 MYO5BQ9ULV0 1848 aa36■■■■□ 3.35
COL13A1-210ENST00000517713 SBNO2Q9Y2G9 1366 aa35.99■■■■□ 3.35
COL13A1-210ENST00000517713 ZFYVE9O95405 1425 aa35.99■■■■□ 3.35
COL13A1-210ENST00000517713 MYOM1P52179 1685 aa35.98■■■■□ 3.35
COL13A1-210ENST00000517713 CC2D1BQ5T0F9 858 aaKnown RBP35.98■■■■□ 3.35
COL13A1-210ENST00000517713 NLRP13Q86W25 1043 aa35.98■■■■□ 3.35
COL13A1-210ENST00000517713 CENPJQ9HC77 1338 aaPredicted RBP35.98■■■■□ 3.35
COL13A1-210ENST00000517713 TRAK1Q9UPV9 953 aa35.96■■■■□ 3.35
COL13A1-210ENST00000517713 TMEM132EQ6IEE7 984 aa35.96■■■■□ 3.35
COL13A1-210ENST00000517713 MLECQ14165 292 aa35.95■■■■□ 3.34
COL13A1-210ENST00000517713 KNSTRNQ9Y448 316 aa35.93■■■■□ 3.34
COL13A1-210ENST00000517713 LRPPRCP42704 1394 aaKnown RBP35.91■■■■□ 3.34
COL13A1-210ENST00000517713 SPATA31D1Q6ZQQ2 1576 aa35.89■■■■□ 3.34
COL13A1-210ENST00000517713 QRICH2Q9H0J4 1663 aa35.89■■■■□ 3.34
COL13A1-210ENST00000517713 NEFLP07196 543 aa35.88■■■■□ 3.33
COL13A1-210ENST00000517713 FKBP8Q14318 412 aa35.88■■■■□ 3.33
COL13A1-210ENST00000517713 AMER1Q5JTC6 1135 aaPredicted RBP35.84■■■■□ 3.33
COL13A1-210ENST00000517713 STAG3Q9UJ98 1225 aa35.84■■■■□ 3.33
COL13A1-210ENST00000517713 ASXL1Q8IXJ9 1541 aa35.83■■■■□ 3.33
COL13A1-210ENST00000517713 ESF1Q9H501 851 aaKnown RBP35.81■■■■□ 3.32
COL13A1-210ENST00000517713 ARHGEF28Q8N1W1 1705 aaKnown RBP35.81■■■■□ 3.32
COL13A1-210ENST00000517713 NPC1L1Q9UHC9 1359 aa35.78■■■■□ 3.32
COL13A1-210ENST00000517713 ZMYM3Q14202 1370 aa35.75■■■■□ 3.31
COL13A1-210ENST00000517713 A2ML1A8K2U0 1454 aa35.75■■■■□ 3.31
COL13A1-210ENST00000517713 SENP3Q9H4L4 574 aaPredicted RBP35.7■■■■□ 3.31
COL13A1-210ENST00000517713 PPP2R1AP30153 589 aa35.69■■■■□ 3.3
COL13A1-210ENST00000517713 CARD14Q9BXL6 1004 aa35.68■■■■□ 3.3
COL13A1-210ENST00000517713 ALKQ9UM73 1620 aa35.68■■■■□ 3.3
COL13A1-210ENST00000517713 PUS7Q96PZ0 661 aaKnown RBP35.67■■■■□ 3.3
COL13A1-210ENST00000517713 EVC2Q86UK5 1308 aa35.67■■■■□ 3.3
COL13A1-210ENST00000517713 STK26Q9P289 416 aa35.66■■■■□ 3.3
COL13A1-210ENST00000517713 SMG6Q86US8 1419 aaKnown RBP35.65■■■■□ 3.3
COL13A1-210ENST00000517713 RIMS2Q9UQ26 1411 aa35.65■■■■□ 3.3
COL13A1-210ENST00000517713 INSRP06213 1382 aa35.64■■■■□ 3.3
COL13A1-210ENST00000517713 BCANQ96GW7 911 aa35.64■■■■□ 3.3
COL13A1-210ENST00000517713 TULP4Q9NRJ4 1543 aa35.63■■■■□ 3.29
COL13A1-210ENST00000517713 YTHDC2Q9H6S0 1430 aaKnown RBP35.63■■■■□ 3.29
COL13A1-210ENST00000517713 PTPRMP28827 1452 aa35.61■■■■□ 3.29
COL13A1-210ENST00000517713 SENP3-EIF4A1A0A087X0R7 540 aa35.6■■■■□ 3.29
COL13A1-210ENST00000517713 SLC12A5Q9H2X9 1139 aa35.6■■■■□ 3.29
COL13A1-210ENST00000517713 NUDCQ9Y266 331 aa35.58■■■■□ 3.29
COL13A1-210ENST00000517713 SAFB2Q14151 953 aaKnown RBP eCLIP35.57■■■■□ 3.28
COL13A1-210ENST00000517713 TNRQ92752 1358 aa35.57■■■■□ 3.28
COL13A1-210ENST00000517713 BLMP54132 1417 aaPredicted RBP35.56■■■■□ 3.28
COL13A1-210ENST00000517713 NSD3Q9BZ95 1437 aa35.54■■■■□ 3.28
COL13A1-210ENST00000517713 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.53■■■■□ 3.28
COL13A1-210ENST00000517713 PRAM1Q96QH2 718 aa35.53■■■■□ 3.28
COL13A1-210ENST00000517713 POGKQ9P215 609 aa35.52■■■■□ 3.28
COL13A1-210ENST00000517713 PELP1Q8IZL8 1130 aaKnown RBP35.5■■■■□ 3.27
COL13A1-210ENST00000517713 CABP2Q9NPB3 220 aa35.5■■■■□ 3.27
COL13A1-210ENST00000517713 SETD1AO15047 1707 aaKnown RBP35.49■■■■□ 3.27
COL13A1-210ENST00000517713 TRHP20396 242 aaPredicted RBP35.49■■■■□ 3.27
COL13A1-210ENST00000517713 ADAMTS8Q9UP79 889 aa35.47■■■■□ 3.27
COL13A1-210ENST00000517713 USP32Q8NFA0 1604 aa35.47■■■■□ 3.27
COL13A1-210ENST00000517713 IRX6P78412 446 aaPredicted RBP35.47■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms