RNA–Protein interactions for RNA: ENST00000517654.5

FAM49B-202, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49B, Length 1,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-202ENST00000517654 KDM5AP29375 1690 aaKnown RBP23.69■■□□□ 1.38
FAM49B-202ENST00000517654 PTPRMP28827 1452 aa23.69■■□□□ 1.38
FAM49B-202ENST00000517654 NLRP1Q9C000 1473 aa23.68■■□□□ 1.38
FAM49B-202ENST00000517654 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
FAM49B-202ENST00000517654 HIRIP3Q9BW71 556 aaPredicted RBP23.67■■□□□ 1.38
FAM49B-202ENST00000517654 RPGRIP1LQ68CZ1 1315 aa23.66■■□□□ 1.38
FAM49B-202ENST00000517654 PIK3C2GO75747 1445 aa23.65■■□□□ 1.38
FAM49B-202ENST00000517654 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
FAM49B-202ENST00000517654 ZFYVE9O95405 1425 aa23.64■■□□□ 1.38
FAM49B-202ENST00000517654 KDM4FA0A1W2PPD8 638 aa23.63■■□□□ 1.37
FAM49B-202ENST00000517654 KIAA1210Q9ULL0 1709 aa23.63■■□□□ 1.37
FAM49B-202ENST00000517654 STAC3Q96MF2 364 aa23.63■■□□□ 1.37
FAM49B-202ENST00000517654 STAG3Q9UJ98 1225 aa23.63■■□□□ 1.37
FAM49B-202ENST00000517654 GPRASP1Q5JY77 1395 aa23.63■■□□□ 1.37
FAM49B-202ENST00000517654 RIMS2Q9UQ26 1411 aa23.62■■□□□ 1.37
FAM49B-202ENST00000517654 ROCK2O75116 1388 aaKnown RBP23.61■■□□□ 1.37
FAM49B-202ENST00000517654 LAMC1P11047 1609 aa23.61■■□□□ 1.37
FAM49B-202ENST00000517654 HSPA5P11021 654 aaKnown RBP23.61■■□□□ 1.37
FAM49B-202ENST00000517654 CEP170BQ9Y4F5 1589 aaPredicted RBP23.61■■□□□ 1.37
FAM49B-202ENST00000517654 CFAP70Q5T0N1 1121 aa23.6■■□□□ 1.37
FAM49B-202ENST00000517654 ZNF142P52746 1687 aaPredicted RBP23.59■■□□□ 1.37
FAM49B-202ENST00000517654 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
FAM49B-202ENST00000517654 CARD11Q9BXL7 1154 aa23.57■■□□□ 1.36
FAM49B-202ENST00000517654 USP47Q96K76 1375 aa23.57■■□□□ 1.36
FAM49B-202ENST00000517654 TMEM2Q9UHN6 1383 aa23.57■■□□□ 1.36
FAM49B-202ENST00000517654 IQGAP1P46940 1657 aa23.56■■□□□ 1.36
FAM49B-202ENST00000517654 NRXN3Q9Y4C0 1643 aa23.55■■□□□ 1.36
FAM49B-202ENST00000517654 VGFO15240 615 aaPredicted RBP23.55■■□□□ 1.36
FAM49B-202ENST00000517654 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
FAM49B-202ENST00000517654 ARHGAP23Q9P227 1491 aa23.55■■□□□ 1.36
FAM49B-202ENST00000517654 ASXL1Q8IXJ9 1541 aa23.55■■□□□ 1.36
FAM49B-202ENST00000517654 EIF4G2P78344 907 aaKnown RBP eCLIP23.54■■□□□ 1.366e-11■■■■■ 31.8
FAM49B-202ENST00000517654 SLIT1O75093 1534 aa23.54■■□□□ 1.36
FAM49B-202ENST00000517654 C14orf93Q9H972 538 aaKnown RBP23.53■■□□□ 1.36
FAM49B-202ENST00000517654 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
FAM49B-202ENST00000517654 SETD1BQ9UPS6 1966 aaKnown RBP23.52■■□□□ 1.36
FAM49B-202ENST00000517654 SETBP1Q9Y6X0 1596 aa23.52■■□□□ 1.36
FAM49B-202ENST00000517654 LTKP29376 864 aa23.51■■□□□ 1.35
FAM49B-202ENST00000517654 ALKQ9UM73 1620 aa23.5■■□□□ 1.35
FAM49B-202ENST00000517654 TMEM132EQ6IEE7 984 aa23.47■■□□□ 1.35
FAM49B-202ENST00000517654 C11orf95C9JLR9 678 aaPredicted RBP23.47■■□□□ 1.35
FAM49B-202ENST00000517654 SCAF11Q99590 1463 aaKnown RBP23.46■■□□□ 1.35
FAM49B-202ENST00000517654 ST20-MTHFSA0A0A6YYL1 179 aa23.45■■□□□ 1.34
FAM49B-202ENST00000517654 THEMISQ8N1K5 641 aaPredicted RBP23.44■■□□□ 1.34
FAM49B-202ENST00000517654 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.44■■□□□ 1.34
FAM49B-202ENST00000517654 TXNDC2Q86VQ3 553 aa23.42■■□□□ 1.34
FAM49B-202ENST00000517654 ADAMTS13Q76LX8 1427 aa23.42■■□□□ 1.34
FAM49B-202ENST00000517654 PLEKHG1Q9ULL1 1385 aa23.41■■□□□ 1.34
FAM49B-202ENST00000517654 POLR1AO95602 1720 aaPredicted RBP23.4■■□□□ 1.34
FAM49B-202ENST00000517654 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.34
FAM49B-202ENST00000517654 WASHC2AQ641Q2 1341 aa23.39■■□□□ 1.33
FAM49B-202ENST00000517654 MED14O60244 1454 aa23.38■■□□□ 1.33
FAM49B-202ENST00000517654 TESK2Q96S53 571 aa23.38■■□□□ 1.33
FAM49B-202ENST00000517654 METP08581 1390 aa23.37■■□□□ 1.33
FAM49B-202ENST00000517654 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
FAM49B-202ENST00000517654 TRAK1Q9UPV9 953 aa23.35■■□□□ 1.33
FAM49B-202ENST00000517654 YTHDC2Q9H6S0 1430 aaKnown RBP23.35■■□□□ 1.33
FAM49B-202ENST00000517654 EID1Q9Y6B2 187 aa23.34■■□□□ 1.33
FAM49B-202ENST00000517654 CCDC7Q96M83 1385 aa23.33■■□□□ 1.33
FAM49B-202ENST00000517654 KIF7Q2M1P5 1343 aa23.33■■□□□ 1.32
FAM49B-202ENST00000517654 DISP3Q9P2K9 1392 aa23.32■■□□□ 1.32
FAM49B-202ENST00000517654 QRICH2Q9H0J4 1663 aa23.31■■□□□ 1.32
FAM49B-202ENST00000517654 STK26Q9P289 416 aa23.31■■□□□ 1.32
FAM49B-202ENST00000517654 SLC26A8Q96RN1 970 aa23.31■■□□□ 1.32
FAM49B-202ENST00000517654 LMTK3Q96Q04 1460 aa23.3■■□□□ 1.32
FAM49B-202ENST00000517654 BCANQ96GW7 911 aa23.29■■□□□ 1.32
FAM49B-202ENST00000517654 PTPRUQ92729 1446 aa23.28■■□□□ 1.32
FAM49B-202ENST00000517654 LRPPRCP42704 1394 aaKnown RBP23.28■■□□□ 1.32
FAM49B-202ENST00000517654 EIF3AQ14152 1382 aaKnown RBP23.28■■□□□ 1.32
FAM49B-202ENST00000517654 DIEXFQ68CQ4 756 aaKnown RBP23.28■■□□□ 1.32
FAM49B-202ENST00000517654 KNDC1Q76NI1 1749 aa23.27■■□□□ 1.32
FAM49B-202ENST00000517654 DDX10Q13206 875 aaKnown RBP23.27■■□□□ 1.32
FAM49B-202ENST00000517654 ANKLE2Q86XL3 938 aa23.27■■□□□ 1.32
FAM49B-202ENST00000517654 DIP2AQ14689 1571 aa23.27■■□□□ 1.32
FAM49B-202ENST00000517654 HSPA2P54652 639 aa23.26■■□□□ 1.31
FAM49B-202ENST00000517654 NCKAP5LQ9HCH0 1330 aa23.25■■□□□ 1.31
FAM49B-202ENST00000517654 DLC1Q96QB1 1528 aa23.25■■□□□ 1.31
FAM49B-202ENST00000517654 CENPJQ9HC77 1338 aaPredicted RBP23.25■■□□□ 1.31
FAM49B-202ENST00000517654 ABCC11Q96J66 1382 aa23.23■■□□□ 1.31
FAM49B-202ENST00000517654 PLEKHH1Q9ULM0 1364 aa23.23■■□□□ 1.31
FAM49B-202ENST00000517654 TBX22Q9Y458 520 aa23.23■■□□□ 1.31
FAM49B-202ENST00000517654 CPS1P31327 1500 aa23.22■■□□□ 1.31
FAM49B-202ENST00000517654 TECPR2O15040 1411 aa23.22■■□□□ 1.31
FAM49B-202ENST00000517654 NPHP4O75161 1426 aaPredicted RBP23.22■■□□□ 1.31
FAM49B-202ENST00000517654 SBNO2Q9Y2G9 1366 aa23.21■■□□□ 1.31
FAM49B-202ENST00000517654 XRN1Q8IZH2 1706 aaKnown RBP23.21■■□□□ 1.31
FAM49B-202ENST00000517654 PRAM1Q96QH2 718 aa23.2■■□□□ 1.3
FAM49B-202ENST00000517654 TULP4Q9NRJ4 1543 aa23.2■■□□□ 1.3
FAM49B-202ENST00000517654 SAFB2Q14151 953 aaKnown RBP eCLIP23.19■■□□□ 1.3
FAM49B-202ENST00000517654 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
FAM49B-202ENST00000517654 WAPLQ7Z5K2 1190 aa23.19■■□□□ 1.3
FAM49B-202ENST00000517654 ROBO2Q9HCK4 1378 aa23.19■■□□□ 1.3
FAM49B-202ENST00000517654 POLR3GLQ9BT43 218 aa23.18■■□□□ 1.3
FAM49B-202ENST00000517654 STRCQ7RTU9 1775 aa23.18■■□□□ 1.3
FAM49B-202ENST00000517654 TMF1P82094 1093 aa23.17■■□□□ 1.3
FAM49B-202ENST00000517654 MYOM1P52179 1685 aa23.16■■□□□ 1.3
FAM49B-202ENST00000517654 CHD2O14647 1828 aaKnown RBP23.16■■□□□ 1.3
FAM49B-202ENST00000517654 FAM135BQ49AJ0 1406 aa23.13■■□□□ 1.29
FAM49B-202ENST00000517654 AMOTL2Q9Y2J4 779 aa23.13■■□□□ 1.29
FAM49B-202ENST00000517654 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms